BAC Information

Click to search

BAC

Clone NameB6Ng01-064B05
Chromosome1 (Build37)
Map Location 67,337,357 - 67,443,593
singlet/doubletdoublet
Overlap genenone
Upstream geneMtap2, C030018G13Rik, Rpe, 1110028C15Rik, Acadl, Myl1, LOC100043192, Lancl1, Cps1
Downstream geneKif22-ps, Erbb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064B05.bB6Ng01-064B05.g
ACCDH883972DH883973
length1,0981,015
definitionDH883972|Mus musculus domesticus DNA, BAC clone: B6Ng01-064B05, 5' end.DH883973|Mus musculus domesticus DNA, BAC clone: B6Ng01-064B05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,337,357 - 67,338,462)(67,442,570 - 67,443,593)
sequence
gaattcaatagagatgcaaatcataggaggaaaatacctaaatgaattgt
cttagtctatttttctcttgataataatgcaatgatacagggtaggtaaa
atatcctcttaagaaagttttacttttgctaatggctctgttttaagttt
gaaggttatcattcagggctggcctggttacagaggactgaggttgtaca
gatgccaaaaaacagttacaaatgtgtgtgtccagtccctcgctttgtaa
aggcatccgatgctcagtcctggggtcccccagtgatgactttaatcctc
tgcctcacaaagattctgtgtctaaatatcacagctctgctgagttttta
agctcttaacatttcaaaatggcatgaaactccaacgtgagatgtagttg
agacaaatacactcaaattgcagtagacatctttaataacgcagcaagtc
tcagcaaatgactgtgctgagactatttaatattaagctgttttgcgtat
catcttataggcatatttattagatgctaagtcacttgaaacgttcttaa
tttgtgtaattctgaacaatactgtcaagtaattattatctcccaaatta
tgggcatctagtcccctatcaaaggatcccatgattctctcctttgttcc
cttttctgtccatccctcttccttttcctctttctccactttagtttgta
cttttccaagttctttccatttctcacctttctttctctttcatttcttc
ttttctttctctctttcctttgctccccccttcctcctcattttctttat
ctcttgttcccctgcttccttacccactatctcaggctcctcatcctttt
ctgtgcatgtctgttcctgtggagattgtgaaaacaatgatttgctcata
tctgagccctttatttgagaggccttgggtgggactcaaactgtgtactt
ccaaaagttctttagtgatattagtttctgctgcaccaaggactatactt
aagagccagttctttttctgatgtgatgttcaggttcctgcttccaaatt
aaatccattagacttagaataagcttagaatttgttagaaaatgcctg
gaattcctaaccactgtgagcatgatcattgggtctgtgacatgtaaaga
catgttttgtgaaagatactttctctcttgagatctccagcatttttaag
atttcagcaaaagtctgtgaatactaggattaatgtaaaatgtttatgaa
cattgacaatgtataaaaataaacagagtcctttatgtagccctgaatta
tcaacagataaacagtttcgcacacttcgttggtatgttttgatatgaga
agcagagaggttagagcttgttctaggtaagagaagaagcagaacagaaa
aaaagaagcacaccaaaagaagctgctaagttaactcagtacttgaaggc
acacaaagaccatatgtgtgaagaaaattctgtattcttcaacaaaacat
aatagtaacacaatattattctgacttaattttaaacacatatccacata
tcaaatctccagcagatttcccagagtactttcacattctatttttttct
gccagcaaatccatattattatacaaatgttttgagattataagaaaaaa
atcctttcatttttgccagggatgaatatgaatgccaaacataaattcaa
atttgcacatctaaaactaaaaatgttccaaggctctcacaggcttcact
tgtagactttattgtatctgactcctctacttcatccatagtttgacatc
atgatttcctgtctcaatactgataattatgtcccactcccctgatgtgt
ctatagtcagcacaggcctcatatacccatcttattttcatttgccacaa
tatctcttgatttaaattactgccaatttcttatcgaaataaattattat
atagtattcctttaatttttctttagtttggagaatttcaaatgtgtgtg
tgtgtgtgtgtttatatctatccccccaatttgcacctctaccctccaaa
tccctcaaatgtccctccacttctgtcatcattgtttttgtttgtcattt
gtatgttttttgaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_67337357_67338462
seq2: B6Ng01-064B05.b_45_1142

seq1  GAATTCAATAGAGATGCAAATCATAGGAGGAAAATACCTAAATGAATTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAGAGATGCAAATCATAGGAGGAAAATACCTAAATGAATTGT  50

seq1  CTTAGTCTATTTTTCTCTTGATAATAATGCAATGATACAGGGTAGGTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTCTATTTTTCTCTTGATAATAATGCAATGATACAGGGTAGGTAAA  100

seq1  ATATCCTCTTAAGAAAGTTTTACTTTTGCTAATGGCTCTGTTTTAAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCTCTTAAGAAAGTTTTACTTTTGCTAATGGCTCTGTTTTAAGTTT  150

seq1  GAAGGTTATCATTCAGGGCTGGCCTGGTTACAGAGGACTGAGGTTGTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTATCATTCAGGGCTGGCCTGGTTACAGAGGACTGAGGTTGTACA  200

seq1  GATGCCAAAAAACAGTTACAAATGTGTGTGTCCAGTCCCTCGCTTTGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCAAAAAACAGTTACAAATGTGTGTGTCCAGTCCCTCGCTTTGTAA  250

seq1  AGGCATCCGATGCTCAGTCCTGGGGTCCCCCAGTGATGACTTTAATCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATCCGATGCTCAGTCCTGGGGTCCCCCAGTGATGACTTTAATCCTC  300

seq1  TGCCTCACAAAGATTCTGTGTCTAAATATCACAGCTCTGCTGAGTTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCACAAAGATTCTGTGTCTAAATATCACAGCTCTGCTGAGTTTTTA  350

seq1  AGCTCTTAACATTTCAAAATGGCATGAAACTCCAACGTGAGATGTAGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTAACATTTCAAAATGGCATGAAACTCCAACGTGAGATGTAGTTG  400

seq1  AGACAAATACACTCAAATTGCAGTAGACATCTTTAATAACGCAGCAAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAATACACTCAAATTGCAGTAGACATCTTTAATAACGCAGCAAGTC  450

seq1  TCAGCAAATGACTGTGCTGAGACTATTTAATATTAAGCTGTTTTGCGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAAATGACTGTGCTGAGACTATTTAATATTAAGCTGTTTTGCGTAT  500

seq1  CATCTTATAGGCATATTTATTAGATGCTAAGTCACTTGAAACGTTCTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTATAGGCATATTTATTAGATGCTAAGTCACTTGAAACGTTCTTAA  550

seq1  TTTGTGTAATTCTGAACAATACTGTCAAGTAATTATTATCTCCCAAATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTAATTCTGAACAATACTGTCAAGTAATTATTATCTCCCAAATTA  600

seq1  TGGGCATCTAGTCCCCTATCAAAGGATCCCATGATTCTCTCCTTTGTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCATCTAGTCCCCTATCAAAGGATCCCATGATTCTCTCCTTTGTTCC  650

seq1  CTTTTCTGTCCATCCCTCTTCCTTTTCCTCTTTCTCCACTTTAGTTTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTGTCCATCCCTCTTCCTTTTCCTCTTTCTCCACTTTAGTTTGTA  700

seq1  CTTTTCCAAGTTCTTTCCATTTCTCACCTTTCTTTCTCTTTCATTTCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCAAGTTCTTTCCATTTCTCACCTTTCTTTCTCTTTCATTTCTTC  750

seq1  TTTTCTTTCTCTCTTTCCTTTGCTCCCCCCTTCCTCCTCATTTTCTTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCTCTCTTTCCTTTGCTCCCCCCTTCCTCCTCATTTTCTTTAT  800

seq1  CTCTTGTTCCCCTGCTTCCTTACCCACTATCTCAGGCTCCTCATCCTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTTCCCCTGCTTCCTTACCCACTATCTCAGGCTCCTCATCCTTTT  850

seq1  CTGTGCATGTCTGTTACCTGTGGAGATTGTGAAAACAATGATTTGCTCAT  900
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTGTGCATGTCTGTT-CCTGTGGAGATTGTGAAAACAATGATTTGCTCAT  899

seq1  ATCTGAGCCCTTTATTTGAGAGGCCTTGGTTGGAACTCAAAACTGTGTAC  950
      ||||||||||||||||||||||||||||| ||| |||| |||||||||||
seq2  ATCTGAGCCCTTTATTTGAGAGGCCTTGGGTGGGACTC-AAACTGTGTAC  948

seq1  TTCCAAAAAGTTCTTTAGTGATAATAGTTTCTGCTGCACCAAGGACTATA  1000
      |||| |||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTCC-AAAAGTTCTTTAGTGATATTAGTTTCTGCTGCACCAAGGACTATA  997

seq1  CTTAAAGAGCCAGTTCTTTATCTGATGTGATGTTCAGGTTCCTGCTTCCA  1050
      ||| ||||||||||||||| ||||||||||||||||||||||||||||| 
seq2  CTT-AAGAGCCAGTTCTTTTTCTGATGTGATGTTCAGGTTCCTGCTTCC-  1045

seq1  AAATTAAATCAATAAGACTTTAGATAGAGCTTAGAATTTGTTTAGAAAAT  1100
      |||||||||| || |||| |||||   ||||||||||||| |||||||| 
seq2  AAATTAAATCCATTAGAC-TTAGAATAAGCTTAGAATTTG-TTAGAAAA-  1092

seq1  TGCCTG  1106
      ||||||
seq2  TGCCTG  1098

seq1: chr1_67442570_67443593
seq2: B6Ng01-064B05.g_69_1083 (reverse)

seq1  TGTCAAAAAACATACAAATGAACAAACAAAAACAATGATGACAGGAAGTT  50
      |||||||||||||||||||| |||||||||||||||||||||| ||||| 
seq2  TGTCAAAAAACATACAAATG-ACAAACAAAAACAATGATGACA-GAAGT-  47

seq1  GGGAGGGGACATTTTGGAGGGATTTGGAGGGTTAGAGGTGCAAATTGGGG  100
       ||| |||||||||  ||||||||||||||| ||||||||||||||||||
seq2  -GGA-GGGACATTT--GAGGGATTTGGAGGG-TAGAGGTGCAAATTGGGG  92

seq1  GGATAGATATAAACACACACACACACACACATTTGAAATTCTCCAAACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGATATAAACACACACACACACACACATTTGAAATTCTCCAAACTA  142

seq1  AAGAAAAATTTAAAGGAATACTATATAATAATTTATTTCGATAAGAAATT  200
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAA-TTAAAGGAATACTATATAATAATTTATTTCGATAAGAAATT  191

seq1  GGCAGTAATTGAAATCAAGAGATATTGTGGCAAATGAAAATAAGATGGGT  250
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTAATTTAAATCAAGAGATATTGTGGCAAATGAAAATAAGATGGGT  241

seq1  ATATGAGGCCTGTGCTGACTATAGACACATCAGGGGAGTGGGACATAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGGCCTGTGCTGACTATAGACACATCAGGGGAGTGGGACATAATT  291

seq1  ATCAGTATTGAGACAGGAAATCATGATGTCAAACTATGGATGAAGTAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTATTGAGACAGGAAATCATGATGTCAAACTATGGATGAAGTAGAG  341

seq1  GAGTCAGATACAATAAAGTCTACAAGTGAAGCCTGTGAGAGCCTTGGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGATACAATAAAGTCTACAAGTGAAGCCTGTGAGAGCCTTGGAAC  391

seq1  ATTTTTAGTTTTAGATGTGCAAATTTGAATTTATGTTTGGCATTCATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAGTTTTAGATGTGCAAATTTGAATTTATGTTTGGCATTCATATT  441

seq1  CATCCCTGGCAAAAATGAAAGGATTTTTTTCTTATAATCTCAAAACATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCTGGCAAAAATGAAAGGATTTTTTTCTTATAATCTCAAAACATTT  491

seq1  GTATAATAATATGGATTTGCTGGCAGAAAAAAATAGAATGTGAAAGTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAATAATATGGATTTGCTGGCAGAAAAAAATAGAATGTGAAAGTACT  541

seq1  CTGGGAAATCTGCTGGAGATTTGATATGTGGATATGTGTTTAAAATTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAAATCTGCTGGAGATTTGATATGTGGATATGTGTTTAAAATTAAG  591

seq1  TCAGAATAATATTGTGTTACTATTATGTTTTGTTGAAGAATACAGAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATAATATTGTGTTACTATTATGTTTTGTTGAAGAATACAGAATTT  641

seq1  TCTTCACACATATGGTCTTTGTGTGCCTTCAAGTACTGAGTTAACTTAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACACATATGGTCTTTGTGTGCCTTCAAGTACTGAGTTAACTTAGC  691

seq1  AGCTTCTTTTGGTGTGCTTCTTTTTTTCTGTTCTGCTTCTTCTCTTACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTTTTGGTGTGCTTCTTTTTTTCTGTTCTGCTTCTTCTCTTACCT  741

seq1  AGAACAAGCTCTAACCTCTCTGCTTCTCATATCAAAACATACCAACGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAGCTCTAACCTCTCTGCTTCTCATATCAAAACATACCAACGAAG  791

seq1  TGTGCGAAACTGTTTATCTGTTGATAATTCAGGGCTACATAAAGGACTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCGAAACTGTTTATCTGTTGATAATTCAGGGCTACATAAAGGACTCT  841

seq1  GTTTATTTTTATACATTGTCAATGTTCATAAACATTTTACATTAATCCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTTTTATACATTGTCAATGTTCATAAACATTTTACATTAATCCTA  891

seq1  GTATTCACAGACTTTTGCTGAAATCTTAAAAATGCTGGAGATCTCAAGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCACAGACTTTTGCTGAAATCTTAAAAATGCTGGAGATCTCAAGAG  941

seq1  AGAAAGTATCTTTCACAAAACATGTCTTTACATGTCACAGACCCAATGAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTATCTTTCACAAAACATGTCTTTACATGTCACAGACCCAATGAT  991

seq1  CATGCTCACAGTGGTTAGGAATTC  1024
      ||||||||||||||||||||||||
seq2  CATGCTCACAGTGGTTAGGAATTC  1015