BAC Information

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BAC

Clone NameB6Ng01-064D14
Chromosome1 (Build37)
Map Location 98,172,728 - 98,321,422
singlet/doubletdoublet
Overlap genenone
Upstream geneTmem157, LOC100041686, Rnu7-ps2, St8sia4
Downstream geneGm1833, Slco4c1, EG329217, Slco6b1, LOC670708, LOC623430, Slco6c1, EG634331, EG634346
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064D14.bB6Ng01-064D14.g
ACCDH884075DH884076
length1,1571,064
definitionDH884075|Mus musculus domesticus DNA, BAC clone: B6Ng01-064D14, 5' end.DH884076|Mus musculus domesticus DNA, BAC clone: B6Ng01-064D14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,172,728 - 98,173,899)(98,320,345 - 98,321,422)
sequence
gaattcaagcatttagagaaagactttactattttaataataagaaacta
atgaaaaagaaagttggagccatcagttttgaaagggagatttggccaag
gttttcttgtagtttctcttgtactttttttactttcatttttttttgtg
tttcatgtagtttttaaacctgtgataaatggcagcaaaagcccatctct
gtgttaatttaaataggaatcaggctctatgtgttctcagaacaaagagt
aaattctcacaagccactttcctatagggctgcctacacaagaagtggca
cccatgtgctcattcaccatagcagaagtctgtccaagaagtgcaccaag
tgtttagaattaattctgaccttaactttgcctataattgcccctaaagc
tgttaataacagataattgaagcatggcaattgttaaataagcctctgat
agagaagaatcaatatccaagaactgttgagaacaattacataaacatgc
tctggatagagaaagtagaaacaaatggcccatgctcccagggttctgaa
gctggcatgactggttgcagttgagctgaaacagctaacatgaggttgat
gaagaaagactagctgttttccccaatagacatcacagtctttttggcag
atggcagaactcttcgtgtgtagatggctcctggatgcttgtgttgcatc
cctggggatctttccaaattaaatttcacccctcctatgcctgctgagaa
ttctacaagtctccttcccagatatgagaattcattactcagtgttggct
ttcttcctggaatcaaaacactgacatttgtataaagttacagcattgtg
acaactgtaactctcagacaacagacacataagagatcccccgagaatgt
aataactttacaggaagctcagaaaaacaaagacatcttttgaaaggatc
ttattgtctgcactgttacacacacacacacacactcacacacacaccca
ctacacactccacaccccgatgcttagtgtaccaagtcactacattctct
ttatggggaaggatgaatcaagtaagaatgtgagggactgaccctgccat
gaaatctaactccctcctgtgcagacagaccagaaactttgatataaaaa
cagtcct
gaattctcagctcttgctcatttctgtaaatagggaatgcgactggtatc
tggatttaaaggaagggccttttgtggatactgtctcttagacttctttc
tctctggtacagacttgtgagctgagtgattatttctcttcttcagaaag
aatgattatccaaacaaatgattatccaatcaaagaaagacatattaatg
tagtcactcaaacacatacatgaccaatcacaaaatgtctatacctcagt
gaccttcctaacacagtagccattcttaagccatgaagtttcaattaggg
ttttacacttttaatatcaactattatacttctattgtgtttttttttgt
taccttaacttacctctgtgattttttttcatgaatctattacaataagg
tgatttttatttaataaaacaaagaagacaggagtaaaagttcataaaaa
gttcctaaagaatttgttcagggcagggccctgagtgagtaccctgagta
aagatacttcctgaatatgtcataatttaagtgcttcatatactgccttt
atttcatattgagctttgtataatttaaaatactttcttcttcttatcca
ctgcttctctaggtccactctacctggatgcttatgagagccattgtatg
aatgcacactcctcacagcagttgtacattcagccaacacgtttgggacc
gttgacaacctcctggcaatgcactagcagctctgaaacattcctcggga
caaatggctctgtaacttgttaacagccttatagtatgtctttgtaccag
tcacggccatctgtttaggacttctgagaatagaagtctggggaatttca
gtttcctcccaatttttgtacacctgggaagatagaatatatgatccatt
ttacctacaactttcataatttcatgtctttactgctgatatatgccata
tatgaaatgaaatgcagcttatttttattaccagtaatcagttgatggct
tctaggatgattccatttctagctttggtgtgagacaagaatgtacattg
gacttcaaacctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_98172728_98173899
seq2: B6Ng01-064D14.b_51_1207

seq1  GAATTCAAGCATTTAGAGAAAGACTTTACTATTTTAATAATAAGAAACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGCATTTAGAGAAAGACTTTACTATTTTAATAATAAGAAACTA  50

seq1  ATGAAAAAGAAAGTTGGAGCCATCAGTTTTGAAAGGGAGATTTGGCCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAAGAAAGTTGGAGCCATCAGTTTTGAAAGGGAGATTTGGCCAAG  100

seq1  GTTTTCTTGTAGTTTCTCTTGTACTTTTTTTACTTTCATTTTTTTTTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTTGTAGTTTCTCTTGTACTTTTTTTACTTTCATTTTTTTTTGTG  150

seq1  TTTCATGTAGTTTTTAAACCTGTGATAAATGGCAGCAAAAGCCCATCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGTAGTTTTTAAACCTGTGATAAATGGCAGCAAAAGCCCATCTCT  200

seq1  GTGTTAATTTAAATAGGAATCAGGCTCTATGTGTTCTCAGAACAAAGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAATTTAAATAGGAATCAGGCTCTATGTGTTCTCAGAACAAAGAGT  250

seq1  AAATTCTCACAAGCCACTTTCCTATAGGGCTGCCTACACAAGAAGTGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTCACAAGCCACTTTCCTATAGGGCTGCCTACACAAGAAGTGGCA  300

seq1  CCCATGTGCTCATTCACCATAGCAGAAGTCTGTCCAAGAAGTGCACCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGTGCTCATTCACCATAGCAGAAGTCTGTCCAAGAAGTGCACCAAG  350

seq1  TGTTTAGAATTAATTCTGACCTTAACTTTGCCTATAATTGCCCCTAAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAGAATTAATTCTGACCTTAACTTTGCCTATAATTGCCCCTAAAGC  400

seq1  TGTTAATAACAGATAATTGAAGCATGGCAATTGTTAAATAAGCCTCTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATAACAGATAATTGAAGCATGGCAATTGTTAAATAAGCCTCTGAT  450

seq1  AGAGAAGAATCAATATCCAAGAACTGTTGAGAACAATTACATAAACATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGAATCAATATCCAAGAACTGTTGAGAACAATTACATAAACATGC  500

seq1  TCTGGATAGAGAAAGTAGAAACAAATGGCCCATGCTCCCAGGGTTCTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATAGAGAAAGTAGAAACAAATGGCCCATGCTCCCAGGGTTCTGAA  550

seq1  GCTGGCATGACTGGTTGCAGTTGAGCTGAAACAGCTAACATGAGGTTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCATGACTGGTTGCAGTTGAGCTGAAACAGCTAACATGAGGTTGAT  600

seq1  GAAGAAAGACTAGCTGTTTTCCCCAATAGACATCACAGTCTTTTTGGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGACTAGCTGTTTTCCCCAATAGACATCACAGTCTTTTTGGCAG  650

seq1  ATGGCAGAACTCTTCGTGTGTAGATGGCTCCTGGATGCTTGTGTTGCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGAACTCTTCGTGTGTAGATGGCTCCTGGATGCTTGTGTTGCATC  700

seq1  CCTGGGGATCTTTCCAAATTAAATTTCACCCCTCCTATGCCTGCTGAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGGATCTTTCCAAATTAAATTTCACCCCTCCTATGCCTGCTGAGAA  750

seq1  TTCTACAAGTCTCCTTCCCAGATATGAGAATTCATTACTCAGTGTTGGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACAAGTCTCCTTCCCAGATATGAGAATTCATTACTCAGTGTTGGCT  800

seq1  TTCTTCCTGGAATCAAAACACTGACATTTGTATAAAGTTACAGCATTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTGGAATCAAAACACTGACATTTGTATAAAGTTACAGCATTGTG  850

seq1  ACAACTGTAACTCTCAGACAACAGACACATAAGAGATCCCCCGAGAATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTGTAACTCTCAGACAACAGACACATAAGAGATCCCCCGAGAATGT  900

seq1  AATAACTTTACAGGGAAGCTCAGAGAAACAAAGAACATCTTTTTGAAAGG  950
      |||||||||||| ||||||||||| |||||||| ||||| ||||||||||
seq2  AATAACTTTACA-GGAAGCTCAGAAAAACAAAG-ACATC-TTTTGAAAGG  947

seq1  AATCTTATTGTCTGCACTGTAAACACACACACACACACACACACACACAC  1000
       |||||||||||||||||||    |||||||||||||||||| |||||||
seq2  -ATCTTATTGTCTGCACTGT---TACACACACACACACACACTCACACAC  993

seq1  ACACACACACACACACACACACACACGAATGCTTAGTGTACCAAGTCACT  1050
      |||| |||  |||||| | ||||| |  ||||||||||||||||||||| 
seq2  ACACCCAC-TACACACTC-CACACCCCGATGCTTAGTGTACCAAGTCAC-  1040

seq1  TACATTCCTCTTAATGCTGAAGGATGAAATCAAGTAAGAGT-TGAGGGAA  1099
      |||||| ||||| |||  |||||||| |||||||||||| | |||||| |
seq2  TACATT-CTCTTTATGGGGAAGGATG-AATCAAGTAAGAATGTGAGGG-A  1087

seq1  CTGACCCTGGCATGAAATCCTAACTCTCTCCTGTGCAAAGCAGCACAG-A  1148
      ||||||||| |||||||| ||||||| |||||||||| | |||  ||| |
seq2  CTGACCCTGCCATGAAAT-CTAACTCCCTCCTGTGCAGA-CAGACCAGAA  1135

seq1  ACTCTGATATAAAATACCAGTCCT  1172
      ||| |||||||||  | |||||||
seq2  ACTTTGATATAAA--AACAGTCCT  1157

seq1: chr1_98320345_98321422
seq2: B6Ng01-064D14.g_69_1132 (reverse)

seq1  AGAGGTTTTGAAGTCCAATGTACATTTCTTGTCTCAACACAATAGCTAAG  50
      ||||| |||||||||||||||||| |||||||||| |||| | |||| ||
seq2  AGAGG-TTTGAAGTCCAATGTACA-TTCTTGTCTC-ACACCAAAGCT-AG  46

seq1  AAATGGAATCATCCTAGAAGCCCATCAACTGATTTACTGGTAATAAAAAT  100
      |||||||||||||||||||| ||||||||||| |||||||||||||||||
seq2  AAATGGAATCATCCTAGAAG-CCATCAACTGA-TTACTGGTAATAAAAAT  94

seq1  AAGCTGCATTTTCATTTCAATATTATGGCATATTATTCAGCAGTAAAGAC  150
      |||||||| ||||||||| ||| ||||||||||   ||||||||||||||
seq2  AAGCTGCA-TTTCATTTC-ATA-TATGGCATAT--ATCAGCAGTAAAGAC  139

seq1  ATGAAATTATGAAAGTTGTAGGTAAAATGGATCATATATTCTATCTTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATTATGAAAGTTGTAGGTAAAATGGATCATATATTCTATCTTCCC  189

seq1  AGGTGTACAAAAAATTGGGAGGAAACCTGAAATTCCCCAGACTTCTATTC  250
      |||||||| |||||||||||||||| ||||||||||||||||||||||||
seq2  AGGTGTAC-AAAAATTGGGAGGAAA-CTGAAATTCCCCAGACTTCTATTC  237

seq1  TCAGAAGTTCCTAAACAGATGGCCGTGACTGGTACAAAGACATACTATAA  300
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAG-TCCTAAACAGATGGCCGTGACTGGTACAAAGACATACTATAA  286

seq1  GGCTGTTAACAAGTTACAGAGCCATTTGTCCCGAGGAATGTTTCAGAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTTAACAAGTTACAGAGCCATTTGTCCCGAGGAATGTTTCAGAGCT  336

seq1  GCTAGTGCATTGCCAGGAGGTTGTCAACGGTCCCAAACGTGTTGGCTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTGCATTGCCAGGAGGTTGTCAACGGTCCCAAACGTGTTGGCTGAA  386

seq1  TGTACAACTGCTGTGAGGAGTGTGCATTCATACAATGGCTCTCATAAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAACTGCTGTGAGGAGTGTGCATTCATACAATGGCTCTCATAAGCA  436

seq1  TCCAGGTAGAGTGGACCTAGAGAAGCAGTGGATAAGAAGAAGAAAGTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTAGAGTGGACCTAGAGAAGCAGTGGATAAGAAGAAGAAAGTATT  486

seq1  TTAAATTATACAAAGCTCAATATGAAATAAAGGCAGTATATGAAGCACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTATACAAAGCTCAATATGAAATAAAGGCAGTATATGAAGCACTT  536

seq1  AAATTATGACATATTCAGGAAGTATCTTTACTCAGGGTACTCACTCAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATGACATATTCAGGAAGTATCTTTACTCAGGGTACTCACTCAGGG  586

seq1  CCCTGCCCTGAACAAATTCTTTAGGAACTTTTTATGAACTTTTACTCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCCTGAACAAATTCTTTAGGAACTTTTTATGAACTTTTACTCCTG  636

seq1  TCTTCTTTGTTTTATTAAATAAAAATCACCTTATTGTAATAGATTCATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTGTTTTATTAAATAAAAATCACCTTATTGTAATAGATTCATGA  686

seq1  AAAAAAATCACAGAGGTAAGTTAAGGTAACAAAAAAAAACACAATAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATCACAGAGGTAAGTTAAGGTAACAAAAAAAAACACAATAGAAG  736

seq1  TATAATAGTTGATATTAAAAGTGTAAAACCCTAATTGAAACTTCATGGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAGTTGATATTAAAAGTGTAAAACCCTAATTGAAACTTCATGGCT  786

seq1  TAAGAATGGCTACTGTGTTAGGAAGGTCACTGAGGTATAGACATTTTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATGGCTACTGTGTTAGGAAGGTCACTGAGGTATAGACATTTTGTG  836

seq1  ATTGGTCATGTATGTGTTTGAGTGACTACATTAATATGTCTTTCTTTGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTCATGTATGTGTTTGAGTGACTACATTAATATGTCTTTCTTTGAT  886

seq1  TGGATAATCATTTGTTTGGATAATCATTCTTTCTGAAGAAGAGAAATAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAATCATTTGTTTGGATAATCATTCTTTCTGAAGAAGAGAAATAAT  936

seq1  CACTCAGCTCACAAGTCTGTACCAGAGAGAAAGAAGTCTAAGAGACAGTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGCTCACAAGTCTGTACCAGAGAGAAAGAAGTCTAAGAGACAGTA  986

seq1  TCCACAAAAGGCCCTTCCTTTAAATCCAGATACCAGTCGCATTCCCTATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAAAAGGCCCTTCCTTTAAATCCAGATACCAGTCGCATTCCCTATT  1036

seq1  TACAGAAATGAGCAAGAGCTGAGAATTC  1078
      ||||||||||||||||||||||||||||
seq2  TACAGAAATGAGCAAGAGCTGAGAATTC  1064