BAC Information

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BAC

Clone NameB6Ng01-064G10
Chromosome1 (Build37)
Map Location 61,761,930 - 61,763,022
singlet/doubletsinglet
Overlap genePard3b
Upstream geneCd28, LOC667555, Rpl18-rs8, Ctla4, LOC100043049, Icos, LOC433313, LOC100042566
Downstream geneLOC667592, Nrp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064G10.bB6Ng01-064G10.g
ACCDH884199DH884200
length9271,071
definitionDH884199|Mus musculus domesticus DNA, BAC clone: B6Ng01-064G10, 5' end.DH884200|Mus musculus domesticus DNA, BAC clone: B6Ng01-064G10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggcatatcaaatgtctgagaagcacctaaagaaatg
tttcaacatccttaatcatcagggaaatgcaaattaaaattaccccaaga
tttcccccttacaccagtcagaatggctaagataaaaaactcaagtgaca
gcacatgctggcaaaagaaagagaaagacttctccattgctggtaggatt
gcaagctggtacaaccacctggaaatcagtctggcagttcctcagtaaat
tggaaatagttctacctgaagacccagcttataccactcgagcatatacc
caaaagatgctctaccataccataaggacacatgttccaccatgttcaga
gcagcattatttataataaccagaaactgcaaactgcccagatgtccctc
aaccgaagaatggatacagaaaatgtggttcatttacatggtggaatact
atacagccaataaaaatgaggacattatgaattttgcaggaaaatggatg
gaaccagaaaatatcattctgagcaaggtaactctgaccccaaaagacat
acatactatgtactcactgattaatagctattagccaaaaagtatagaat
acctaagacataacccatagactgtaagaagtgtaacaagtagaaagttc
caagtgatgatgcttcaatcccacttagaaggggggaggaaataatcatg
ggaggcatagggagggaggaaactatatgggagagagaaggggaagggaa
aaggagaacatgatcaggtatgggggtacaggagaaaagtccagaggccc
aagagatagaatggagataagcagcctatgggagggtggcatatgagggg
accttctggaaatgtccagagaccagggaaggtgatggcagcttgttttc
tctaccagttgtattatattcccagta
gaattccaaacattacacaatcacagaaactatatgcagctggcaaaatc
atgtccctgcataaggcaaatcataatcagctgtggtggacaatctgcag
cagtcccatatcccacacctgggattaaatgaaaacacattcattcatat
ttcagagctttcaaaagaaactaaaattttctctacaatgatatacctct
tttagctatttaggtgggccttctcaaagatggtaaattatagattggtg
tccaacgaagatatacaggtggctaaaagtgtataagtggttctcatcaa
aaccataaagagatattctcttacatctattaaaaggctattgtcaccaa
aacaaaatagtcaaggtgacaaaaattcttaaatgttgttggtgagactg
ttggatagtatagccatcatggaaatattatagtagcaattattaaaaac
atcagaagtattataaattgcacttctaagaatgtagcaaaaagaattta
gatcaagatcttaaagaggcatttgcattcctatgctcattctagcagca
tttggaaggaactgcttccgtaacagccagatgtgtctttttcttttctg
ggtaatgattatagactgtaattcttttaatcacttacctgttacaggat
atttttggttgtgcctagcttttgcttagcacaacacatggttatgaaca
accacagattaactctcaggcaaggagacgtggccactgctacagggaag
aacattgcctgcaatgggtgggggcactttgtcttgcaaaataccccatc
agaatcagctggggacctcccacaaccatatccaagttacaggatcacat
gcttttccattactggcccactttaactgagaacataccagcagctgtga
attaatcatgtctgaagtccatccattgcatgaggaagctgtgtttggtt
ccatcactagaggtctttgacattaagaaatgatctcctttcaggcacac
atacagatgctagattgcatggtgttgagctgggaatttcatctttcctg
ggtttttttttcatcagagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_61761930_61763022
seq2: B6Ng01-064G10.g_68_1138

seq1  GAATTCCAAACATTACACAATCACAGAAACTATATGCAGCTGGCAAAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAACATTACACAATCACAGAAACTATATGCAGCTGGCAAAATC  50

seq1  ATGTCCCTGCATAAGGCAAATCATAATCAGCTGTGGTGGACAATCTGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCCTGCATAAGGCAAATCATAATCAGCTGTGGTGGACAATCTGCAG  100

seq1  CAGTCCCATATCCCACACCTGGGATTAAATGAAAACACATTCATTCATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCCATATCCCACACCTGGGATTAAATGAAAACACATTCATTCATAT  150

seq1  TTCAGAGCTTTCAAAAGAAACTAAAATTTTCTCTACAATGATATACCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGCTTTCAAAAGAAACTAAAATTTTCTCTACAATGATATACCTCT  200

seq1  TTTAGCTATTTAGGTGGGCCTTCTCAAAGATGGTAAATTATAGATTGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTATTTAGGTGGGCCTTCTCAAAGATGGTAAATTATAGATTGGTG  250

seq1  TCCAACGAAGATATACAGGTGGCTAAAAGTGTATAAGTGGTTCTCATCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACGAAGATATACAGGTGGCTAAAAGTGTATAAGTGGTTCTCATCAA  300

seq1  AACCATAAAGAGATATTCTCTTACATCTATTAAAAGGCTATTGTCACCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATAAAGAGATATTCTCTTACATCTATTAAAAGGCTATTGTCACCAA  350

seq1  AACAAAATAGTCAAGGTGACAAAAATTCTTAAATGTTGTTGGTGAGACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATAGTCAAGGTGACAAAAATTCTTAAATGTTGTTGGTGAGACTG  400

seq1  TTGGATAGTATAGCCATCATGGAAATATTATAGTAGCAATTATTAAAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATAGTATAGCCATCATGGAAATATTATAGTAGCAATTATTAAAAAC  450

seq1  ATCAGAAGTATTATAAATTGCACTTCTAAGAATGTAGCAAAAAGAATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAGTATTATAAATTGCACTTCTAAGAATGTAGCAAAAAGAATTTA  500

seq1  GATCAAGATCTTAAAGAGGCATTTGCATTCCTATGCTCATTCTAGCAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAGATCTTAAAGAGGCATTTGCATTCCTATGCTCATTCTAGCAGCA  550

seq1  TTTGGAAGGAACTGCTTCCGTAACAGCCAGATGTGTCTTTTTCTTTTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAGGAACTGCTTCCGTAACAGCCAGATGTGTCTTTTTCTTTTCTG  600

seq1  GGTAATGATTATAGACTGTAATTCTTTTAATCACTTACCTGTTACAGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATGATTATAGACTGTAATTCTTTTAATCACTTACCTGTTACAGGAT  650

seq1  A-TTTTGGTTGTGCCTAGCTTTTGCTTAGCACAACACATGGTTATGAACA  699
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGGTTGTGCCTAGCTTTTGCTTAGCACAACACATGGTTATGAACA  700

seq1  ACCACAGATTAACTCTCAGGCAAGGAGACGTGGCCACTGCTACAGGGAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGATTAACTCTCAGGCAAGGAGACGTGGCCACTGCTACAGGGAAG  750

seq1  AACATTGCCTGCAATGGGTGGGGGCACTTTGTCTTGCAAAATAACCCCAT  799
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AACATTGCCTGCAATGGGTGGGGGCACTTTGTCTTGCAAAAT-ACCCCAT  799

seq1  CAGAATCAGCTGGGGACCTCCCACAAACCATATCCCAAGTTACAGGATCA  849
      |||||||||||||||||||||||| |||||||| ||||||||||||||||
seq2  CAGAATCAGCTGGGGACCTCCCAC-AACCATAT-CCAAGTTACAGGATCA  847

seq1  CATGCTTTTCCAATTACTGGCCCACTTTAACTGAGAACAGTACCAGCAGC  899
      ||||||||||| ||||||||||||||||||||||||||| ||||||||||
seq2  CATGCTTTTCC-ATTACTGGCCCACTTTAACTGAGAACA-TACCAGCAGC  895

seq1  TGTGATTTAAATTCATGTCTGAAGTCCATCCATTGCATGATGAAGCTTGT  949
      ||||| ||||  |||||||||||||||||||||||||||| ||||| |||
seq2  TGTGAATTAA--TCATGTCTGAAGTCCATCCATTGCATGAGGAAGC-TGT  942

seq1  GTTTGGTTTCCATCCACTTAAGAGGTCTTTGGACAATAAAGAAATGATCC  999
      |||||| |||||| ||||  |||||||||| ||| || ||||||||||| 
seq2  GTTTGG-TTCCAT-CACT--AGAGGTCTTT-GAC-ATTAAGAAATGATCT  986

seq1  TCTTTCAGGGCACACATACAGATGCTTAGATTGCATGTGTTTGGAGCTGG  1049
       |||||| ||||||||||||||||| ||||||||||| || | |||||||
seq2  CCTTTCA-GGCACACATACAGATGC-TAGATTGCATG-GTGTTGAGCTGG  1033

seq1  GAAATTTCATCTTTCCTTGTGTTTTTTTTTTTTCATCCAGAGAT  1093
      | ||||||||||||||| |     |||||||||||| |||||||
seq2  G-AATTTCATCTTTCCTGG----GTTTTTTTTTCAT-CAGAGAT  1071