BAC Information

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BAC

Clone NameB6Ng01-065C01
Chromosome1 (Build37)
Map Location 80,588,092 - 80,589,263
singlet/doubletsinglet
Overlap geneDock10
Upstream geneAp1s3, Wdfy1, Mrpl44, Serpine2, EG433326, LOC665064, LOC100039325, A830043J08Rik, 2310015K22Rik, Cul3, EG620899, 1700016L21Rik
Downstream geneLOC665092, 9430031J16Rik, EG621020
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065C01.bB6Ng01-065C01.g
ACCDH884697DH884698
length1261,158
definitionDH884697|Mus musculus domesticus DNA, BAC clone: B6Ng01-065C01, 5' end.DH884698|Mus musculus domesticus DNA, BAC clone: B6Ng01-065C01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagtctggatttcattccttaggacattttctatcttttccttt
ccttttcctttccttttcctttccttttcctttccttttcctttcctttt
cctctcctctcctctcctctccactc
gaattctcctcatcaaatacaggaaaaatatggatccattgttactacag
tagtaggtaggatggttaaagacaacagaggtgctaaggacagaaggtct
cactgtctcctgcagcccactgtgccccaactcatcaagttagttccact
caggaaggaggcatgggtggtgttggaaaaggccaagcaagtgaacaacg
cccctcctgccttctaagacatatacggcttgagtaccaaaatcataaaa
atcaagtttcttttctgggctgggagacagcagttgaaacttaatagatg
tcccaataggatgcattgaaagagaatgaaagaaaacacactgaaagatt
gactagcatctgttccgatgtttcttcaagatgtctatacttgctttatc
atataatcttattctaagcaggaatactatgaaatcttagagtggatttg
ttagcaggttttcctccaagtaacagcaaattcccaatgtcagtttaaaa
gccatcttgagtcagccatggtgggatgcacctgtcatcccaagcacttg
gggaagtagaaccaggaggatctgggttctaggctagtctcagctattca
ttaatgctttgcctcataaaaccaaaggccagagctcctgggatacttac
ttgcatagtaatcctagcctcagcatcacaataaataaacaaacatcccc
ttcactatcatcagacatacaagcagtgttgtaggaaacaactgtggtca
ctgtgtacaaaggactccagaatcctggccctttgttgcatcttaaacaa
tacgttaaaaggaaattttatagcagtatatataggattcttcctcagaa
tttctgcacattttgcaatatgagaagtgctggcaatagactcttttcat
actagatgctagatcctgaggttagcaagcatagaaaagtttgggctagg
ataggatgacataaggcttgctggtatgatagaatgaggagagaactaca
ttggtacagggtcatattcattctctgtaccacatccctggagattggag
tgagagctctacgatgatcatgattcttttgggagctttctctcaagggt
tggtcactcactcattttccaaaccgtcattttgaaactcagggtctaaa
aaaggtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_80588092_80589263
seq2: B6Ng01-065C01.g_66_1223

seq1  GAATTCTCCTCATCAAATACAGGAAAAATATGGATCCATTGTTACTACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTCATCAAATACAGGAAAAATATGGATCCATTGTTACTACAG  50

seq1  TAGTAGGTAGGATGGTTAAAGACAACAGAGGTGCTAAGGACAGAAGGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGGTAGGATGGTTAAAGACAACAGAGGTGCTAAGGACAGAAGGTCT  100

seq1  CACTGTCTCCTGCAGCCCACTGTGCCCCAACTCATCAAGTTAGTTCCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTCTCCTGCAGCCCACTGTGCCCCAACTCATCAAGTTAGTTCCACT  150

seq1  CAGGAAGGAGGCATGGGTGGTGTTGGAAAAGGCCAAGCAAGTGAACAACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGGAGGCATGGGTGGTGTTGGAAAAGGCCAAGCAAGTGAACAACG  200

seq1  CCCCTCCTGCCTTCTAAGACATATACGGCTTGAGTACCAAAATCATAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCTGCCTTCTAAGACATATACGGCTTGAGTACCAAAATCATAAAA  250

seq1  ATCAAGTTTCTTTTCTGGGCTGGGAGACAGCAGTTGAAACTTAATAGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTTTCTTTTCTGGGCTGGGAGACAGCAGTTGAAACTTAATAGATG  300

seq1  TCCCAATAGGATGCATTGAAAGAGAATGAAAGAAAACACACTGAAAGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATAGGATGCATTGAAAGAGAATGAAAGAAAACACACTGAAAGATT  350

seq1  GACTAGCATCTGTTCCGATGTTTCTTCAAGATGTCTATACTTGCTTTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGCATCTGTTCCGATGTTTCTTCAAGATGTCTATACTTGCTTTATC  400

seq1  ATATAATCTTATTCTAAGCAGGAATACTATGAAATCTTAGAGTGGATTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATCTTATTCTAAGCAGGAATACTATGAAATCTTAGAGTGGATTTG  450

seq1  TTAGCAGGTTTTCCTCCAAGTAACAGCAAATTCCCAATGTCAGTTTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGGTTTTCCTCCAAGTAACAGCAAATTCCCAATGTCAGTTTAAAA  500

seq1  GCCATCTTGAGTCAGCCATGGTGGGATGCACCTGTCATCCCAAGCACTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCTTGAGTCAGCCATGGTGGGATGCACCTGTCATCCCAAGCACTTG  550

seq1  GGGAAGTAGAACCAGGAGGATCTGGGTTCTAGGCTAGTCTCAGCTATTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGTAGAACCAGGAGGATCTGGGTTCTAGGCTAGTCTCAGCTATTCA  600

seq1  TTAATGCTTTGCCTCATAAAACCAAAGGCCAGAGCTCCTGGGATACTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGCTTTGCCTCATAAAACCAAAGGCCAGAGCTCCTGGGATACTTAC  650

seq1  TTGCATAGTAATCCTAGCCTCAGCATCACAATAAATAAACAAACATCCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATAGTAATCCTAGCCTCAGCATCACAATAAATAAACAAACATCCCC  700

seq1  TTCACTATCATCAGACATACAAGCAGTGTTGTAGGAAACAACTGTGGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTATCATCAGACATACAAGCAGTGTTGTAGGAAACAACTGTGGTCA  750

seq1  CTGTGTACAAAGGACTCCAGAATCCTGGCCCTTTGTTGCATCTTAAACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTACAAAGGACTCCAGAATCCTGGCCCTTTGTTGCATCTTAAACAA  800

seq1  TACGTTAAAAGGAAATTTTATAGCAGTATATATAGGATTCTTCCTCAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTTAAAAGGAAATTTTATAGCAGTATATATAGGATTCTTCCTCAGAA  850

seq1  TTTCTGCACA-TTTGCAATATGAGAAGTGCTGGCAAATAGACTCTTTTCA  899
      |||||||||| ||||||||||||||||||||||| |||||||||||||||
seq2  TTTCTGCACATTTTGCAATATGAGAAGTGCTGGC-AATAGACTCTTTTCA  899

seq1  TACTAGATGCTAGATCCTGAGGTTAGCAAGCATAGAAAAGTTTGGGCTAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGATGCTAGATCCTGAGGTTAGCAAGCATAGAAAAGTTTGGGCTAG  949

seq1  GATAGAATGACATAA-GCCTGCTGGTTATGATAGAATGAGAGAGAAACTT  998
      ||||| ||||||||| || |||||| |||||||||||||| |||| |  |
seq2  GATAGGATGACATAAGGCTTGCTGG-TATGATAGAATGAG-GAGAGAACT  997

seq1  ACATTGGTTACAGGGTCATATTCATTCTCTGTAACACATCCCTGAAGATT  1048
      ||||||| ||||||||||||||||||||||||| |||||||||| |||||
seq2  ACATTGG-TACAGGGTCATATTCATTCTCTGTACCACATCCCTGGAGATT  1046

seq1  GAAGTTGAGAGCTCTACAGATGATCATGATTCTTTTGGCAGCTTTCTCTT  1098
      | || |||||||||||| |||||||||||||||||||| ||||||||| |
seq2  GGAG-TGAGAGCTCTAC-GATGATCATGATTCTTTTGGGAGCTTTCTC-T  1093

seq1  CAAAGGGTTTGATCATCAACTCATTTTCAAAACTGTCCCTTTTTTGAAGC  1148
      |||  || ||| |||   |||||||||| |||| |||    ||||||| |
seq2  CAA--GGGTTGGTCACTCACTCATTTTCCAAACCGTC---ATTTTGAAAC  1138

seq1  TTCAGGGTCTAAAAAAAAAGGTTA  1172
       |||||||||   |||||||||||
seq2  -TCAGGGTCT---AAAAAAGGTTA  1158