BAC Information

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BAC

Clone NameB6Ng01-069F16
Chromosome1 (Build37)
Map Location 152,582,814 - 152,720,747
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042813, Pla2g4a, Ptgs2, LOC676712, LOC100043257, LOC100043261, Pdc, BC003331, Tpr, EG625534
Downstream geneEG545370, LOC668040, LOC676758, EG668050, LOC668055, 3110040M04Rik, LOC100043286, Ivns1abp, 1200016B10Rik, 1190005F20Rik, Rnf2, Niban, Edem3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069F16.bB6Ng01-069F16.g
ACCDH887689DH887690
length1,0781,126
definitionDH887689|Mus musculus domesticus DNA, BAC clone: B6Ng01-069F16, 5' end.DH887690|Mus musculus domesticus DNA, BAC clone: B6Ng01-069F16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(152,582,814 - 152,583,910)(152,719,611 - 152,720,747)
sequence
gaattcaaacctggacttgctcttggttaaatgactccagggagaagtgc
ttttatgtctttccttaatgtcatgctgatacattgtcggtagctcagag
ttaatctctgatgtgtataatccgagcacttgtccatgacctggggttct
ttcttctcacagtcacagctgtgtgctggcatgtgctggtgcatacctga
attaatctactcactaagccaagagtttcattagctcaggaaccacatca
gttttattcaaacctgagcatttaacattgacccaccaccatgtactaaa
ctcttgtattaaagtttatgtttaatgaaaaaaaaaagaaaaaagaatgt
gctaaggaaacattgtcggtagctcagagttaatctctgatgtgtataat
ccaagcacttgtagatgtggcatcacaccacagctctaataaccgcggcc
tttgggaggctgggggaagaagactgtgagtctaaggccagcctatgata
ctagtgagatgctcttgaaaataacaaagatttaagaagtagataaaaat
ataaaaagctaggacagtgaagactagacagtttctccaggtgctcgaag
aaccctgagctgcagctgagcatttgtcaatcatcagacacaggtggtat
tcatggatggacagaatgaacatcacgagacacagtaagaaaaaagacca
gtaaggggaaaaaaaaacctgccaaggttgtttaaatagcctgtggctaa
tatatatatatataatgggaggaaaacaataacataaatgtagttcagtt
tgggggagagaaaggaaattgattttttttgtattgctgaatgcaatttt
atgaatatatcacttctaggcttcactttcacctaaaaacacaaattaca
tgcctattttgatacaaaatattgaaagaaagtcatgtgtacaagtgaac
ttataatgtaaatataacttactagctaaaataaactaatgacagcagta
aatcacttgtatcataatctagcatagtgatgatcactttcagactttct
tctgcgaagcacccaccacatttcttcc
gaattcaagcccaagacctattagcaagagatttacagtgcttgcttctt
tctctgtaagaatacagctgaactctcttcacaaaagtccgaagagactg
aaaatagctacattccaaataagacctggcacagcacggctgtttcctgc
ctctccccgcttgtgttttgaaggatcttcagggagtgcccgaatcctcc
ctgcgccatctgtctccagggtgaaggatcctgcttcctgactcacaccc
cgttgactctcttggcagtgttcttcccaacatcctctggaattgggtct
gatgcagtcaatatgtagggtcatttgatttttttacctccaaaaagaca
aaaacaaaacaaaagaaaacactactctcttggaagtggagctggggtcc
acatctctagacatttgctctgggcgaggcatgtctaattaattattatt
tattgctgttttgttttggctttgtgttgtcataagatccacaagggccc
aattagaatatcttgttgagaaagaaatgagatattcagtttttcctttc
attcaacactgagtgctattacacacatcaagagaccatgggagtatttt
aattcgaaactttctagtgaatgcttctcttttcaataaaagcaaaaact
ttattaagtaagggccaaatcaaacaagcaaacaaacaaacataacaagt
ctagattgcattaacacttcatatttaatgtaagaagtatatactgtttt
tctttgtttggagagtgttttattgtttcataaattagtatgagtaacta
agtatgttatatatttttataaaattttcatagattttttggacatataa
tttcctgacctttctgaccccacctcccaccccaccccctgccaaaacaa
gtcaagtacagcaagattaccgctctataaaactgaacttggacctgtga
agatcaacatctaaaaaaaaatcccttcacatttaaattgtctttaaagt
gaaaagagaatgcttgtttgaggcttattaaatcctcgcctatacaacgc
ctctggtcttagtttattttcccatggaagagtgatggagaaactaatct
aacattgtaagaacactgacagaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_152582814_152583910
seq2: B6Ng01-069F16.b_46_1123

seq1  GAATTCAAACCTGGACTTGCTCTTGGTTAAATGACTCCAGGGAGAAGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACCTGGACTTGCTCTTGGTTAAATGACTCCAGGGAGAAGTGC  50

seq1  TTTTATGTCTTTCCTTAATGTCATGCTGATACATTGTCGGTAGCTCAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGTCTTTCCTTAATGTCATGCTGATACATTGTCGGTAGCTCAGAG  100

seq1  TTAATCTCTGATGTGTATAATCCGAGCACTTGTCCATGACCTGGGGTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTCTGATGTGTATAATCCGAGCACTTGTCCATGACCTGGGGTTCT  150

seq1  TTCTTCTCACAGTCACAGCTGTGTGCTGGCATGTGCTGGTGCATACCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTCACAGTCACAGCTGTGTGCTGGCATGTGCTGGTGCATACCTGA  200

seq1  ATTAATCTACTCACTAAGCCAAGAGTTTCATTAGCTCAGGAACCACATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATCTACTCACTAAGCCAAGAGTTTCATTAGCTCAGGAACCACATCA  250

seq1  GTTTTATTCAAACCTGAGCATTTAACATTGACCCACCACCATGTACTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATTCAAACCTGAGCATTTAACATTGACCCACCACCATGTACTAAA  300

seq1  CTCTTGTATTAAAGTTTATGTTTAATGAAAAAAAAAAGAAAAAAGAATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTATTAAAGTTTATGTTTAATGAAAAAAAAAAGAAAAAAGAATGT  350

seq1  GCTAAGGAAACATTGTCGGTAGCTCAGAGTTAATCTCTGATGTGTATAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGGAAACATTGTCGGTAGCTCAGAGTTAATCTCTGATGTGTATAAT  400

seq1  CCAAGCACTTGTAGATGTGGCATCACACCACAGCTCTAATAACCGCGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCACTTGTAGATGTGGCATCACACCACAGCTCTAATAACCGCGGCC  450

seq1  TTTGGGAGGCTGGGGGAAGAAGACTGTGAGTCTAAGGCCAGCCTATGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGAGGCTGGGGGAAGAAGACTGTGAGTCTAAGGCCAGCCTATGATA  500

seq1  CTAGTGAGATGCTCTTGAAAATAACAAAGATTTAAGAAGTAGATAAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGAGATGCTCTTGAAAATAACAAAGATTTAAGAAGTAGATAAAAAT  550

seq1  ATAAAAAGCTAGGACAGTGAAGACTAGACAGTTTCTCCAGGTGCTCGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAGCTAGGACAGTGAAGACTAGACAGTTTCTCCAGGTGCTCGAAG  600

seq1  AACCCTGAGCTGCAGCTGAGCATTTGTCAATCATCAGACACAGGTGGTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGAGCTGCAGCTGAGCATTTGTCAATCATCAGACACAGGTGGTAT  650

seq1  TCATGGATGGACAGAATGAACATCAGGAGACACAGTAAGAAAAAAGACCA  700
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCATGGATGGACAGAATGAACATCACGAGACACAGTAAGAAAAAAGACCA  700

seq1  GTAAGGGGAAAAAAAAACCTGCCAAGGTTGTTTAAATAGCCTGTGGCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGGGAAAAAAAAACCTGCCAAGGTTGTTTAAATAGCCTGTGGCTAA  750

seq1  TATATATATATATAATGGGAGGAAAAACAATAACATAAATGTAGTTCAGG  800
      |||||||||||||||||||||| ||||||||||||||||||||||||| |
seq2  TATATATATATATAATGGGAGG-AAAACAATAACATAAATGTAGTTCA-G  798

seq1  TTTGGGGGAGAGAAAGGAAATTGATTTTTTTTGTATTGCTGAATGCAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  TTTGGGGGAGAGAAAGGAAATTGATTTTTTTTGTATTGCTGAATGCAA--  846

seq1  TTTTATGAATATATCACTTCTAGGCTTCACTTTCACCTAAAAACACAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGAATATATCACTTCTAGGCTTCACTTTCACCTAAAAACACAAAT  896

seq1  TACATGCCTATTTTGATAACAAAATATTGAAAAGAAAGTCATGTGTAACA  950
      ||||||||||||||||| ||||||||||| |||||||||||||||||   
seq2  TACATGCCTATTTTGAT-ACAAAATATTG-AAAGAAAGTCATGTGTA--C  942

seq1  AAGTGAACTTATAATGTTAAATATAACTTTACTAGCTAAAAATTAAACTA  1000
      |||||||||||||||| |||||||||| |||||||||||||  |||||||
seq2  AAGTGAACTTATAATG-TAAATATAAC-TTACTAGCTAAAA--TAAACTA  988

seq1  ATGACAGCAGTTAAAATCACTTGTATCATAATCTAGCATAGTGATGATTC  1050
      |||||||||||  |||||||||||||||||||||||||||||||||| ||
seq2  ATGACAGCAGT--AAATCACTTGTATCATAATCTAGCATAGTGATGA-TC  1035

seq1  ACTTTCAGACTTTCTTCCTGCCGGAAGCACCCACCACATTCTCTTCC  1097
      |||||||||||||||| ||||  ||||||||||||||||| ||||||
seq2  ACTTTCAGACTTTCTT-CTGC--GAAGCACCCACCACATT-TCTTCC  1078

seq1: chr1_152719611_152720747
seq2: B6Ng01-069F16.g_65_1190 (reverse)

seq1  ACTTCTGTCAGTGTTTCTTACAAATGTTTAGATTAGTTTTCTCATTCCAC  50
      ||||||||||||| ||||||| |||| ||||||||||||   |||  |||
seq2  ACTTCTGTCAGTG-TTCTTAC-AATG-TTAGATTAGTTTCTCCAT--CAC  45

seq1  TTCTCAATGGGAAAATAAACTAAGA-CAGAGGCGATGTTAATAGGCGAGT  99
      |  || ||||||||||||||||||| |||||||| |||  ||||||||| 
seq2  TCTTCCATGGGAAAATAAACTAAGACCAGAGGCGTTGT--ATAGGCGAGG  93

seq1  ATTTAATAAGCCTCAAAC-AGCATTCTCTTCTCACTTTTAAAGACCAATT  148
      |||||||||||||||||| ||||||||||| |||| |||||||| |||||
seq2  ATTTAATAAGCCTCAAACAAGCATTCTCTTTTCAC-TTTAAAGA-CAATT  141

seq1  TAAATGTGAAGGGATTTTTTTTTTAGATGTTTGATCTTCCACAGGTCCAA  198
      |||||||||||||| |||||||||||||| |||||||| |||||||||||
seq2  TAAATGTGAAGGGA-TTTTTTTTTAGATG-TTGATCTT-CACAGGTCCAA  188

seq1  GTTCAGTTTTAATAGAGCGGTAATCTTTGCTGTACTTGACTTGTTTTGGC  248
      |||||||||| |||||||||||||| ||||||||||||||||||||||||
seq2  GTTCAGTTTT-ATAGAGCGGTAATC-TTGCTGTACTTGACTTGTTTTGGC  236

seq1  AGGGGGTGGGGTGGGAGGTGGGGTCAGAAAGGTCAGGAAATTATAATGTC  298
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGGGGGTGGGGTGGGAGGTGGGGTCAGAAAGGTCAGGAAATTAT-ATGTC  285

seq1  CAAAAAATCTATGAAAATTTTAT-AAAATATATAACATACTTAGTTACTC  347
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CAAAAAATCTATGAAAATTTTATAAAAATATATAACATACTTAGTTACTC  335

seq1  ATACTAATTTATGAAACAATAAAACACTCTCCAAACAAAG-AAAACAGTA  396
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATACTAATTTATGAAACAATAAAACACTCTCCAAACAAAGAAAAACAGTA  385

seq1  TATACTTCTTACATTAAATATGAAGTGTTAATGCAATCTAGACTTGTTAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTCTTACATTAAATATGAAGTGTTAATGCAATCTAGACTTGTTAT  435

seq1  GTTTGTTTGTTTGCTTGTTTGATTTGGCCCTTACTTAATAAAGTTTTTGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGTTTGCTTGTTTGATTTGGCCCTTACTTAATAAAGTTTTTGC  485

seq1  TTTTATTGAAAAGAGAAGCATTCACTAGAAAGTTTCGAATTAAAATACTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTGAAAAGAGAAGCATTCACTAGAAAGTTTCGAATTAAAATACTC  535

seq1  CCATGGTCTCTTGATGTGTGTAATAGCACTCAGTGTTGAATGAAAGGAAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGTCTCTTGATGTGTGTAATAGCACTCAGTGTTGAATGAAAGGAAA  585

seq1  AACTGAATATCTCATTTCTTTCTCAACAAGATATTCTAATTGGGCCCTTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAATATCTCATTTCTTTCTCAACAAGATATTCTAATTGGGCCCTTG  635

seq1  TGGATCTTATGACAACACAAAGCCAAAACAAAACAGCAATAAATAATAAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCTTATGACAACACAAAGCCAAAACAAAACAGCAATAAATAATAAT  685

seq1  TAATTAGACATGCCTCGCCCAGAGCAAATGTCTAGAGATGTGGACCCCAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAGACATGCCTCGCCCAGAGCAAATGTCTAGAGATGTGGACCCCAG  735

seq1  CTCCACTTCCAAGAGAGTAGTGTTTTCTTTTGTTTTGTTTTTGTCTTTTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTTCCAAGAGAGTAGTGTTTTCTTTTGTTTTGTTTTTGTCTTTTT  785

seq1  GGAGGTAAAAAAATCAAATGACCCTACATATTGACTGCATCAGACCCAAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTAAAAAAATCAAATGACCCTACATATTGACTGCATCAGACCCAAT  835

seq1  TCCAGAGGATGTTGGGAAGAACACTGCCAAGAGAGTCAACGGGGTGTGAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGGATGTTGGGAAGAACACTGCCAAGAGAGTCAACGGGGTGTGAG  885

seq1  TCAGGAAGCAGGATCCTTCACCCTGGAGACAGATGGCGCAGGGAGGATTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAGCAGGATCCTTCACCCTGGAGACAGATGGCGCAGGGAGGATTC  935

seq1  GGGCACTCCCTGAAGATCCTTCAAAACACAAGCGGGGAGAGGCAGGAAAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACTCCCTGAAGATCCTTCAAAACACAAGCGGGGAGAGGCAGGAAAC  985

seq1  AGCCGTGCTGTGCCAGGTCTTATTTGGAATGTAGCTATTTTCAGTCTCTT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGTGCTGTGCCAGGTCTTATTTGGAATGTAGCTATTTTCAGTCTCTT  1035

seq1  CGGACTTTTGTGAAGAGAGTTCAGCTGTATTCTTACAGAGAAAGAAGCAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACTTTTGTGAAGAGAGTTCAGCTGTATTCTTACAGAGAAAGAAGCAA  1085

seq1  GCACTGTAAATCTCTTGCTAATAGGTCTTGGGCTTGAATTC  1137
      |||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGTAAATCTCTTGCTAATAGGTCTTGGGCTTGAATTC  1126