BAC Information

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BAC

Clone NameB6Ng01-074G04
Chromosome1 (Build37)
Map Location 62,899,457 - 63,039,266
singlet/doubletdoublet
Overlap genenone
Upstream genePard3b, LOC667592, Nrp2, LOC100043070
Downstream geneA430093A21Rik, Ndufs1, Eef1b2, Gpr1, 1700039I01Rik, 4930431J08Rik, LOC667644, LOC100042638, Adam23, Gm215, Mdh1b, Fastkd2, 4933402D24Rik, LOC671842, OTTMUSG00000013918
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074G04.bB6Ng01-074G04.g
ACCDH891249DH891250
length4511,125
definitionDH891249|Mus musculus domesticus DNA, BAC clone: B6Ng01-074G04, 5' end.DH891250|Mus musculus domesticus DNA, BAC clone: B6Ng01-074G04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,899,457 - 62,899,913)(63,038,125 - 63,039,266)
sequence
cccaaaaggaagatcacgaagatttcctggactcaccagccaatctaagg
gctttcccagaaaagctaagaaccttagaccctgtgactcagtaaatgcc
tgaaagggtttgctttagtctataaaagtagatgaagatcaagaataact
gaccactctgactcaaacccagcttgtacatctcaacactgggcagggag
tcaaaagtgcataataagcaaaaaataaattacaagatacaaaagtaaac
actatctcagatataaagtcggacactggcactctgtgtctgtctgtctg
tctgtctgtctgtctctgtctctgtgtgtgtatgtatgtttgtgtccacg
tgtgtgtctatgtgtatatctgtgtgtgtctgcatgtgtctatgtgtata
tctgtgtgtttctgtgtgtgtgtctgtgttgaggcagggtggggggtggg
g
gaattctaatgtatgtacacagttactgatttttgaggtctccatgtata
gcccggactggcctcaaacttgtaattctgggaatggaagcatgcaagtg
tgggggcctgagtttgatccctaggtgtcatcaactcgctatcatgggag
ttagggagggtcacaggaccctacctatcactgagcattcatctgcaggc
tcatgaggagggagagacattcccttcttctgcacagtctctgacacact
gctcccgtaagcaaaccctccatgttcctgtaagcaaccaaaaagaaacc
tcccagccaccgagacaggaatgtacaggggcgcttgctgggaagaagaa
aggggtcggtggcagtgggcaggagcaagagagggtaatggcagagggag
gagtggagacggccagaattcattatgtacatggatgtacatgttataat
gatgatcattgtcatgtagaagtaacatgctaattaaacagttaagaaaa
agctatgctgggtggtggtggtgcaaatcattaatcccagcacttgggaa
gctgaggcagatggatctctgagtttgaggccagattggtttacagaaca
agttcctggactgccaaaaacacacagagaaaccttttctaaaaaaaaaa
aaaaaaaagaaataagaaaaagaaaatctgggcatggtagtgtgtgtgct
cacctccatgtgtggagacagattcaggaggatctctggagccctctgac
agcctgtgacaaagagagaccctgtcttgaaaacacaaaaagtccattgt
ccctgaagaagaaaagcctcacccaaaacttgacctttgacttctactca
catccactcacaacacacattcacacacacacttatactcacatacacac
atgcatgcacgcgcgcgcacacacacacacacacacacacacacacacac
acacatacacacacactcatacacacacagtctcatctgctgcatcccac
accctgcttgcttttatgagaaatttaataagcaaggacgtccatgtctt
atgtgatgatatctgaggaatttatcctcggtccaacgaaaataaacaaa
aaggtccaaattggttaaattttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_62899457_62899913
seq2: B6Ng01-074G04.b_45_501

seq1  GAATTCCCCAAAAGGAAGATCACGAAGATTTCCTGGACTCACCAGCCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCAAAAGGAAGATCACGAAGATTTCCTGGACTCACCAGCCAAT  50

seq1  CTAAGGGCTTTCCCAGAAAAGCTAAGAACCTTAGACCCTGTGACTCAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGGCTTTCCCAGAAAAGCTAAGAACCTTAGACCCTGTGACTCAGTA  100

seq1  AATGCCTGAAAGGGTTTGCTTTAGTCTATAAAAGTAGATGAAGATCAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCTGAAAGGGTTTGCTTTAGTCTATAAAAGTAGATGAAGATCAAGA  150

seq1  ATAACTGACCACTCTGACTCAAACCCAGCTTGTACATCTCAACACTGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGACCACTCTGACTCAAACCCAGCTTGTACATCTCAACACTGGGC  200

seq1  AGGGAGTCAAAAGTGCATAATAAGCAAAAAATAAATTACAAGATACAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGTCAAAAGTGCATAATAAGCAAAAAATAAATTACAAGATACAAAA  250

seq1  GTAAACACTATCTCAGATATAAAGTCGGACACTGGCACTCTGTGTCTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACACTATCTCAGATATAAAGTCGGACACTGGCACTCTGTGTCTGTC  300

seq1  TGTCTGTCTGTCTGTCTGTCTCTGTCTCTGTGTGTGTATGTATGTTTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCTGTCTGTCTGTCTCTGTCTCTGTGTGTGTATGTATGTTTGTG  350

seq1  TCCACGTGTGTGTCTATGTGTATATCTGTGTGTGTCTGCATGTGTCTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACGTGTGTGTCTATGTGTATATCTGTGTGTGTCTGCATGTGTCTATG  400

seq1  TGTATATCTGTGTGTTTCTGTGTGTGTGTCTGTGTTGAGGCAGGGTGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATCTGTGTGTTTCTGTGTGTGTGTCTGTGTTGAGGCAGGGTGGGG  450

seq1  GGTGGGG  457
      |||||||
seq2  GGTGGGG  457

seq1: chr1_63038125_63039266
seq2: B6Ng01-074G04.g_65_1189 (reverse)

seq1  AGAAATATTTAACAATGTTTGGAAACATTTTTTGTTTATTTTCATTGGGG  50
      ||||| ||||||| |  ||||||     ||||||||||||||| ||||  
seq2  AGAAA-ATTTAACCA-ATTTGGA---CCTTTTTGTTTATTTTCGTTGG--  43

seq1  AACCGGAGGATAAAATACCTCAGATATCATCACATAAGACATGGACGTTC  100
       ||| |||||| |||| |||||||||||||||||||||||||||||| ||
seq2  -ACC-GAGGAT-AAATTCCTCAGATATCATCACATAAGACATGGACG-TC  89

seq1  CCTGCTTATTAAA-TTCTCAT-AAAGCAAGCAGGGTGTGGGATGCAAGCA  148
      | ||||||||||| ||||||| ||||||||||||||||||||||| ||| 
seq2  CTTGCTTATTAAATTTCTCATAAAAGCAAGCAGGGTGTGGGATGC-AGC-  137

seq1  AGATGGAGACTGTGTGTGTATGAGTGTGTGTGTATGTGTGTGTGTGTGTG  198
      |||| |||||||||||||||||||||||||||||      ||||||||||
seq2  AGAT-GAGACTGTGTGTGTATGAGTGTGTGTGTA------TGTGTGTGTG  180

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGTGCATGCATGTGTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGTGCATGCATGTGTG  230

seq1  TATGTGAGTATAAGTGTGTGTGTGAATGTGTGTTGTGAGTGGATGTGAGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGAGTATAAGTGTGTGTGTGAATGTGTGTTGTGAGTGGATGTGAGT  280

seq1  AGAAGTCAAAGGTCAAGTTTTGGGTGAGGCTTTTCTTCTTCAGGGACAAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTCAAAGGTCAAGTTTTGGGTGAGGCTTTTCTTCTTCAGGGACAAT  330

seq1  GGACTTTTTGTGTTTTCAAGACAGGGTCTCTCTTTGTCACAGGCTGTCAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTTTTGTGTTTTCAAGACAGGGTCTCTCTTTGTCACAGGCTGTCAG  380

seq1  AGGGCTCCAGAGATCCTCCTGAATCTGTCTCCACACATGGAGGTGAGCAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTCCAGAGATCCTCCTGAATCTGTCTCCACACATGGAGGTGAGCAC  430

seq1  ACACACTACCATGCCCAGATTTTCTTTTTCTTATTTC-TTTTTTTTTTTT  497
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACACACTACCATGCCCAGATTTTCTTTTTCTTATTTCTTTTTTTTTTTTT  480

seq1  TTTTTAGAAAAGGTTTCTCTGTGTGTTTTTGGCAGTCCAGGAACTTGTTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGAAAAGGTTTCTCTGTGTGTTTTTGGCAGTCCAGGAACTTGTTC  530

seq1  TGTAAACCAATCTGGCCTCAAACTCAGAGATCCATCTGCCTCAGCTTCCC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAACCAATCTGGCCTCAAACTCAGAGATCCATCTGCCTCAGCTTCCC  580

seq1  AAGTGCTGGGATTAATGATTTGCACCACCACCACCCAGCATAGCTTTTTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTGGGATTAATGATTTGCACCACCACCACCCAGCATAGCTTTTTC  630

seq1  TTAACTGTTTAATTAGCATGTTACTTCTACATGACAATGATCATCATTAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGTTTAATTAGCATGTTACTTCTACATGACAATGATCATCATTAT  680

seq1  AACATGTACATCCATGTACATAATGAATTCTGGCCGTCTCCACTCCTCCC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTACATCCATGTACATAATGAATTCTGGCCGTCTCCACTCCTCCC  730

seq1  TCTGCCATTACCCTCTCTTGCTCCTGCCCACTGCCACCGACCCCTTTCTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCATTACCCTCTCTTGCTCCTGCCCACTGCCACCGACCCCTTTCTT  780

seq1  CTTCCCAGCAAGCGCCCCTGTACATTCCTGTCTCGGTGGCTGGGAGGTTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCAGCAAGCGCCCCTGTACATTCCTGTCTCGGTGGCTGGGAGGTTT  830

seq1  CTTTTTGGTTGCTTACAGGAACATGGAGGGTTTGCTTACGGGAGCAGTGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGGTTGCTTACAGGAACATGGAGGGTTTGCTTACGGGAGCAGTGT  880

seq1  GTCAGAGACTGTGCAGAAGAAGGGAATGTCTCTCCCTCCTCATGAGCCTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGACTGTGCAGAAGAAGGGAATGTCTCTCCCTCCTCATGAGCCTG  930

seq1  CAGATGAATGCTCAGTGATAGGTAGGGTCCTGTGACCCTCCCTAACTCCC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGAATGCTCAGTGATAGGTAGGGTCCTGTGACCCTCCCTAACTCCC  980

seq1  ATGATAGCGAGTTGATGACACCTAGGGATCAAACTCAGGCCCCCACACTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAGCGAGTTGATGACACCTAGGGATCAAACTCAGGCCCCCACACTT  1030

seq1  GCATGCTTCCATTCCCAGAATTACAAGTTTGAGGCCAGTCCGGGCTATAC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCTTCCATTCCCAGAATTACAAGTTTGAGGCCAGTCCGGGCTATAC  1080

seq1  ATGGAGACCTCAAAAATCAGTAACTGTGTACATACATTAGAATTC  1142
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGACCTCAAAAATCAGTAACTGTGTACATACATTAGAATTC  1125