BAC Information

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BAC

Clone NameB6Ng01-074P13
Chromosome1 (Build37)
Map Location 102,467,069 - 102,596,015
singlet/doubletdoublet
Overlap genenone
Upstream geneC230078M14Rik, LOC633295, EG666200
Downstream geneLOC100041909, LOC100040993, LOC383650
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074P13.bB6Ng01-074P13.g
ACCDH891674DH891675
length1,1551,160
definitionDH891674|Mus musculus domesticus DNA, BAC clone: B6Ng01-074P13, 5' end.DH891675|Mus musculus domesticus DNA, BAC clone: B6Ng01-074P13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,467,069 - 102,468,225)(102,594,857 - 102,596,015)
sequence
gaattcaaggtaggtcagtctggtaaagcaccggaaaagatcatttcagg
aggcattttgtatatttctatgtgtgtgagtatagctgtgaggataaaaa
cacagaggaggagttctttataggcttttctgcaaatatgaaatagaggt
tcttgcaaaagcctcataaagtcacaccttaccttttaagaatgaaataa
aatgacacataattcagagtctaagtgagcattttaaaaatggaataaca
tttattcaatatataattaaattgatagatttgatttgagttttaaaaga
ataatttctaaattccccatacttaagacaaaggatatctttcctaacca
ctttgcacatgagagattagaaacagagttcagcagtcaagaagaaatat
actgaaatggaacaaaatgggaaatagaatttttgcaaagcatgtcaagt
aaacaggatatatcagtagaagatgaaatataaaaagccaaaagtccaca
ctccttgtgtcccatctagtgcagtaattactatttttctgctttctttc
cttatgccttgcagttgtaccatcggtatttactacactcatgccatttg
tataatgaaatttggagaatatagaaagtagtgttttactcaaaggttgg
aagaaaatcaattatcatgtaacttttgtaattttcaacatggctataat
ctctatgtaggtacaaatatgcatttgttttattagtatatattaattac
aaataagatttcaattatgatattttcatatgtttgtacaatgtaaaaga
acatcaaaaacaaacagttaaacagggctttttctttggtgtgtctatgt
ttttgatatgtgtctactgtatttctggatgtgggttgctctccatctta
gtttttgaggtttctcattgaagcttgatatcataaattatctagactag
ctgtccagtatgccctagggatctatctgactcttccatctattcacacc
acagtttctgtacatacctccatgcctggacttttcgtgtagtactagga
atccaaacttatttccacattgtttgcatgggagacactttataatccaa
gacagtacccagcatagaagttcttttggaaaagtaatggagatgatcac
ctgta
gaattctacacttgagggaatgcaagtgaaaggggaaggaaagcccacct
cctatggtccaggaaatcaacagaagaggaggcagctaggcatcaatgag
acaggaggactcattgtgctttctctgactgagagactttcaaggagata
tttcaaatgcctttccaagtatcctcccttctttctgatactggacacac
agctcagatcagcgtgcaagaagccataggttccatctccataactacat
atatcatgaagcaaactggctgtgtactccagcaatctaacactaaggag
gtgaaggcaggatgacatgcagtgaggaggtgaaggcaggatgacatcca
gtacactgacataattggctacagagtgagtaagggcatctggagatata
tgtctctgtctgagacagagacagagacagagacagagagagagagagag
agagagagagagagagagagagatctccctcttttcctttaacccaggcc
attagatgtcatcctggagagacaggaggttggaaagagggaaatatttc
agtagattttatatgaatttactatgctgacttcagtgatttaagattag
tgacaagctagatcaatactgtagccaggagtaaacataaaaatttgaca
tgcagtggactttgtctattcaaattttcttcacctattgacaattcaag
tacataaattcaatgcctaaatctcaagacaaagatttagatttgacctc
atctcacagagtaaatcaaattacaggagcagtatttaccaactgcaaag
aataaaatgattaaacatcttaggaactcaattgcctacacagaatataa
tttcagctctagaagcaggatgtgatgtgctggccaatgttttgatatgc
taattatgccagtcatctaaaatgaatttattattaatatctgctacatt
tactgaacctttatatggctgggccaatgtgctaagcattgacattaact
acaaccctatgaggaagcaattaatgtaccttcataaacaaggaaccagg
ggccagatgaagtcctcactgtgtttacctaaagtaatgtacaaaaatta
ctgccctcaatacagggtcctaggagtccaaaggaactgaatccatattc
taacatgcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_102467069_102468225
seq2: B6Ng01-074P13.b_43_1197

seq1  GAATTCAAGGTAGGTCAGTCTGGTAAAGCAGCAGAAAAGATCATTTCAGG  50
      |||||||||||||||||||||||||||||| | |||||||||||||||||
seq2  GAATTCAAGGTAGGTCAGTCTGGTAAAGCACCGGAAAAGATCATTTCAGG  50

seq1  AGGCATTTTGTATATTTCTATGTGTGTGAGTATAGCTGTGAGCATAAAAA  100
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGGCATTTTGTATATTTCTATGTGTGTGAGTATAGCTGTGAGGATAAAAA  100

seq1  CACAGAGGAGGAGTTCTTTATAGGCTTTTCTGCAAATATGAAATAGAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGGAGGAGTTCTTTATAGGCTTTTCTGCAAATATGAAATAGAGGT  150

seq1  TCTTGCAAAAGCCTCATAAAGTCACACCTTACCTTTTAAGAATGAAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCAAAAGCCTCATAAAGTCACACCTTACCTTTTAAGAATGAAATAA  200

seq1  AATGACACATAATTCAGAGTCTAAGTGAGCATTTTAAAAATGGAATAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACACATAATTCAGAGTCTAAGTGAGCATTTTAAAAATGGAATAACA  250

seq1  TTTATTCAATATATAATTAAATTGATAGATTTGATTTGAGTTTTAAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCAATATATAATTAAATTGATAGATTTGATTTGAGTTTTAAAAGA  300

seq1  ATAATTTCTAAATTCCCCATACTTAAGACAAAGGATATCTTTCCTAACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTCTAAATTCCCCATACTTAAGACAAAGGATATCTTTCCTAACCA  350

seq1  CTTTGCACATGAGAGATTAGAAACAGAGTTCAGCAGTCAAGAAGAAATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCACATGAGAGATTAGAAACAGAGTTCAGCAGTCAAGAAGAAATAT  400

seq1  ACTGAAATGGAACAAAATGGGAAATAGAATTTTTGCAAAGCATGTCAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAATGGAACAAAATGGGAAATAGAATTTTTGCAAAGCATGTCAAGT  450

seq1  AAACAGGATATATCAGTAGAAGATGAAATATAAAAAGCCAAAAGTCCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGGATATATCAGTAGAAGATGAAATATAAAAAGCCAAAAGTCCACA  500

seq1  CTCCTTGTGTCCCATCTAGTGCAGTAATTACTATTTTTCTGCTTTCTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTGTGTCCCATCTAGTGCAGTAATTACTATTTTTCTGCTTTCTTTC  550

seq1  CTTATGCCTTGCAGTTGTACCATCGGTATTTACTACACTCATGCCATTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGCCTTGCAGTTGTACCATCGGTATTTACTACACTCATGCCATTTG  600

seq1  TATAATGAAATTTGGAGAATATAGAAAGTAGTGTTTTACTCAAAGGTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATGAAATTTGGAGAATATAGAAAGTAGTGTTTTACTCAAAGGTTGG  650

seq1  AAGAAAATCAATTATCATGTAACTTTTGTAATTTTCAACATGGCTATAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATCAATTATCATGTAACTTTTGTAATTTTCAACATGGCTATAAT  700

seq1  CTCTATGTAGGTACAAATATGCATTTGTTTTATTAGTATATATTAATTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGTAGGTACAAATATGCATTTGTTTTATTAGTATATATTAATTAC  750

seq1  AAATAAGATTTCAATTATGATATTTTCATATGTTTGTACAATGTAAAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGATTTCAATTATGATATTTTCATATGTTTGTACAATGTAAAAGA  800

seq1  ACATCAAAAACAAACAGTTAAACAGGGCTTTTTCTTTGGTGTGTCTATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAAAAACAAACAGTTAAACAGGGCTTTTTCTTTGGTGTGTCTATGT  850

seq1  TTTTGATATGTGTCTACTGTATTTCTGGATGTGGGTTGCTCTCCATCTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATATGTGTCTACTGTATTTCTGGATGTGGGTTGCTCTCCATCTTA  900

seq1  GTTTTTGAGGTTTCTCATTGAAGCTTGATATCATAAATTATCTAGACTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGAGGTTTCTCATTGAAGCTTGATATCATAAATTATCTAGACTAG  950

seq1  CTGTCCAGTATGCCCTAGGGATCTATCTGACTCTTCCATCTATTCACACC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCAGTATGCCCTAGGGATCTATCTGACTCTTCCATCTATTCACACC  1000

seq1  ACAGTTTCTGTACATACCTCCATGCCT-GACTTTTCGTGTAGGTACTAGG  1049
      ||||||||||||||||||||||||||| ||||||||||||| ||||||||
seq2  ACAGTTTCTGTACATACCTCCATGCCTGGACTTTTCGTGTA-GTACTAGG  1049

seq1  AATCCAAACTTATTTCCACA-TGTTTGCATGGAAAACACTTTATAATCCA  1098
      |||||||||||||||||||| ||||||||||| | |||||||||||||||
seq2  AATCCAAACTTATTTCCACATTGTTTGCATGGGAGACACTTTATAATCCA  1099

seq1  AGACAGTTACCCAAGCATAAGAGTTC-TTTGAAACAGTAATGAAAGATTG  1147
      |||||| ||||| ||||||  ||||| |||| || |||||||  ||| ||
seq2  AGACAG-TACCC-AGCATAGAAGTTCTTTTGGAAAAGTAATG-GAGA-TG  1145

seq1  ATCACCTGTA  1157
      ||||||||||
seq2  ATCACCTGTA  1155

seq1: chr1_102594857_102596015
seq2: B6Ng01-074P13.g_70_1229 (reverse)

seq1  TTGCATTGTTAGAATATGGATTTCAGT--CTTTTGACTTCTAGGGACACC  48
      ||||| |||||||||||||| ||||||  |||| |||| ||| |||| ||
seq2  TTGCA-TGTTAGAATATGGA-TTCAGTTCCTTTGGACTCCTA-GGAC-CC  46

seq1  TGTATAGAAGGCAATAA-TTTTGTACATTAACTTTA-GTAAACACAGTGA  96
      ||||| || |||| ||| ||||||||||| |||||| |||||||||||||
seq2  TGTATTGAGGGCAGTAATTTTTGTACATT-ACTTTAGGTAAACACAGTGA  95

seq1  GGACTTCATCTGG-CCCTGG-TCCTTGTTTATGAAGGTACA-TAATTGCT  143
      ||||||||||||| |||||| |||||||||||||||||||| ||||||||
seq2  GGACTTCATCTGGCCCCTGGTTCCTTGTTTATGAAGGTACATTAATTGCT  145

seq1  TCCTTCATAGGGTTGTAGTTAATGTCAATGCTTAGCACATTGG-CCAGCC  192
      ||| ||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCC-TCATAGGGTTGTAGTTAATGTCAATGCTTAGCACATTGGCCCAGCC  194

seq1  ATAATAAAGGTTCAGTAAATGTTAGCAGATATTAATAATAAATTCATTTT  242
      || |||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AT-ATAAAGGTTCAGTAAATG-TAGCAGATATTAATAATAAATTCATTTT  242

seq1  AGATGACTGGCATAATTAGCATATC-AAACATTGGCCAGCACATCACATC  291
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGATGACTGGCATAATTAGCATATCAAAACATTGGCCAGCACATCACATC  292

seq1  CTGCTTCTAGAGCTGAAATTATATTCTGTGTAGGCAATTGAGTTCCTAAG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTAGAGCTGAAATTATATTCTGTGTAGGCAATTGAGTTCCTAAG  342

seq1  ATGTTTAATCATTTTATTCTTTGCAGTTGGTAAATACTGCTCCTGTAATT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAATCATTTTATTCTTTGCAGTTGGTAAATACTGCTCCTGTAATT  392

seq1  TGATTTACTCTGTGAGATGAGGTCAAATCTAAATCTTTGTCTTGAGATTT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTACTCTGTGAGATGAGGTCAAATCTAAATCTTTGTCTTGAGATTT  442

seq1  AGGCATTGAATTTATGTACTTGAATTGTCAATAGGTGAAGAAAATTTGAA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTGAATTTATGTACTTGAATTGTCAATAGGTGAAGAAAATTTGAA  492

seq1  TAGACAAAGTCCACTGCATGTCAAATTTTTATGTTTACTCCTGGCTACAG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAAAGTCCACTGCATGTCAAATTTTTATGTTTACTCCTGGCTACAG  542

seq1  TATTGATCTAGCTTGTCACTAATCTTAAATCACTGAAGTCAGCATAGTAA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATCTAGCTTGTCACTAATCTTAAATCACTGAAGTCAGCATAGTAA  592

seq1  ATTCATATAAAATCTACTGAAATATTTCCCTCTTTCCAACCTCCTGTCTC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATATAAAATCTACTGAAATATTTCCCTCTTTCCAACCTCCTGTCTC  642

seq1  TCCAGGATGACATCTAATGGCCTGGGTTAAAGGAAAAGAGGGAGATCTCT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGATGACATCTAATGGCCTGGGTTAAAGGAAAAGAGGGAGATCTCT  692

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTGTCTCTGTCT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTGTCTCTGTCT  742

seq1  CTGTCTCAGACAGAGACATATATCTCCAGATGCCCTTACTCACTCTGTAG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCAGACAGAGACATATATCTCCAGATGCCCTTACTCACTCTGTAG  792

seq1  CCAATTATGTCAGTGTACTGGATGTCATCCTGCCTTCACCTCCTCACTGC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTATGTCAGTGTACTGGATGTCATCCTGCCTTCACCTCCTCACTGC  842

seq1  ATGTCATCCTGCCTTCACCTCCTTAGTGTTAGATTGCTGGAGTACACAGC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATCCTGCCTTCACCTCCTTAGTGTTAGATTGCTGGAGTACACAGC  892

seq1  CAGTTTGCTTCATGATATATGTAGTTATGGAGATGGAACCTATGGCTTCT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGCTTCATGATATATGTAGTTATGGAGATGGAACCTATGGCTTCT  942

seq1  TGCACGCTGATCTGAGCTGTGTGTCCAGTATCAGAAAGAAGGGAGGATAC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACGCTGATCTGAGCTGTGTGTCCAGTATCAGAAAGAAGGGAGGATAC  992

seq1  TTGGAAAGGCATTTGAAATATCTCCTTGAAAGTCTCTCAGTCAGAGAAAG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAAGGCATTTGAAATATCTCCTTGAAAGTCTCTCAGTCAGAGAAAG  1042

seq1  CACAATGAGTCCTCCTGTCTCATTGATGCCTAGCTGCCTCCTCTTCTGTT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGAGTCCTCCTGTCTCATTGATGCCTAGCTGCCTCCTCTTCTGTT  1092

seq1  GATTTCCTGGACCATAGGAGGTGGGCTTTCCTTCCCTTTTCACTTGCATT  1141
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GATTTCCTGGACCATAGGAGGTGGGCTTTCCTTCCCCTTTCACTTGCATT  1142

seq1  CCCTCCTGTGTAGAATTC  1159
      |||||  |||||||||||
seq2  CCCTCAAGTGTAGAATTC  1160