BAC Information

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BAC

Clone NameB6Ng01-076B11
Chromosome1 (Build37)
Map Location 26,663,363 - 26,664,433
singlet/doubletsinglet
Overlap genenone
Upstream geneBai3, LOC665595
Downstream gene4931408C20Rik, LOC677427
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076B11.bB6Ng01-076B11.g
ACCDH892458DH892459
length6611,050
definitionDH892458|Mus musculus domesticus DNA, BAC clone: B6Ng01-076B11, 5' end.DH892459|Mus musculus domesticus DNA, BAC clone: B6Ng01-076B11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgcggaatcctgaatggcctagaatcttataaagaaatg
gtcaacatccttagttatcagggacatgcaaatcaaaataaacctcagat
tccaacatacaccaacattccttcattgcctgtgggattacaacttggta
caacctctttggagaccaatatgatggttcctcagaaattttgaaagagt
tctactggaagacacagctataccattcctgggcatatacccaaattttg
ctcccccatatcatagggacatgtgatccactatgttcgtagaagcctta
tttataatagccagaaactggaaacaacccagatgttcctcagtggaaga
atggatacaggaaatgtgatacatttgcacaatggaatactactaagcta
ttgaaaacaaggccatcatgaattttgcaggcaagtggatggaactagaa
aatatcatcctgagttaggtaacgcagatagaaaggtacatggtatgtcc
tcactgataagggcatatgggtcaaaaatctcagaatatgcaggatacat
gtaacagaccataggaagcttaataagaaggaagaccaaattgtggatgc
ttgaatcctacatagaagagggagggataatcaggggtggcagtgggagg
aagggatctaa

gaattccaaagtgtcaccaagttataatccaataaacttgtgctgctatc
ttcaggcagaacattcagaaggaaaaacagaagtcaaatcatctttgatt
ctgtgcaatatgtgggcgaacagctgattctaggcaaaggatgcagataa
tggggtaataaatctgctctttaccagggtcatatctcccatctagctta
acccaaaagaaataggcattttcttaattagttcatctggagaatgaatt
tctgttgagctaatttggtctggaagaaaaggtcagattaattatgtctg
tttactcagctatatggtatctgaaccaggatcttggaagaacgggatac
attagaaattaatcaatagatcactgatatctatacataaactaggagct
agaagctaccaattgtattctagttactattcagtgagctacccctacag
tctactcataaaactttatgttaattattgttattcaaaatgacagcaag
tgagtgctaggtcagaagcagaaaccagagacagtgtctttaataaggag
gatttccgataataatatttcttcagagattttcatgctataacatagac
atacaaataaaataagctgttaattttaaatagtattgtatattatatgc
aggcattgggattcccagaaatgaggtcaataaattttaactgaggaatt
agacttatcaacccattactgtgctcagaaagtggagagagattaagcat
aaaagagaggtcagaggtaaggaagaaaacaaaggacaaggaaagcagaa
agaaatgaaaatatgaaaaggggaggggagagaaaagaataaggaaaact
aagaaaggtagaatataggtagaaataaaaataatgattaggagataaag
aagaaagagagagcaggagaaatagatgatgaaatgtaaagggatgagag
aggaaattgtttcacaaagcttcagataaatgatatggagaaatgtaata
aatgaatcagtaaatctatgtgtggcagatgacatgctcatgatggagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_26663363_26664433
seq2: B6Ng01-076B11.g_72_1121

seq1  GAATTCCAAAGTGTCACCAAGTTATAATCCAATAAACTTGTGCTGCTATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGTGTCACCAAGTTATAATCCAATAAACTTGTGCTGCTATC  50

seq1  TTCAGGCAGAACATTCAGAAGGAAAAACAGAAGTCAAATCATCTTTGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGCAGAACATTCAGAAGGAAAAACAGAAGTCAAATCATCTTTGATT  100

seq1  CTGTGCAATATGTGGGCGAACAGCTGATTCTAGGCAAAGGATGCAGATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCAATATGTGGGCGAACAGCTGATTCTAGGCAAAGGATGCAGATAA  150

seq1  TGGGGTAATAAATCTGCTCTTTACCAGGGTCATATCTCCCATCTAGCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTAATAAATCTGCTCTTTACCAGGGTCATATCTCCCATCTAGCTTA  200

seq1  ACCCAAAAGAAATAGGCATTTTCTTAATTAGTTCATCTGGAGAATGAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAAAGAAATAGGCATTTTCTTAATTAGTTCATCTGGAGAATGAATT  250

seq1  TCTGTTGAGCTAATTTGGTCTGGAAGAAAAGGTCAGATTAATTATGTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGAGCTAATTTGGTCTGGAAGAAAAGGTCAGATTAATTATGTCTG  300

seq1  TTTACTCAGCTATATGGTATCTGAACCAGGATCTTGGAAGAACGGGATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTCAGCTATATGGTATCTGAACCAGGATCTTGGAAGAACGGGATAC  350

seq1  ATTAGAAATTAATCAATAGATCACTGATATCTATACATAAACTAGGAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAAATTAATCAATAGATCACTGATATCTATACATAAACTAGGAGCT  400

seq1  AGAAGCTACCAATTGTATTCTAGTTACTATTCAGTGAGCTACCCCTACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTACCAATTGTATTCTAGTTACTATTCAGTGAGCTACCCCTACAG  450

seq1  TCTACTCATAAAACTTTATGTTAATTATTGTTATTCAAAATGACAGCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTCATAAAACTTTATGTTAATTATTGTTATTCAAAATGACAGCAAG  500

seq1  TGAGTGCTAGGTCAGAAGCAGAAACCAGAGACAGTGTCTTTAATAAGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGCTAGGTCAGAAGCAGAAACCAGAGACAGTGTCTTTAATAAGGAG  550

seq1  GATTTCCGATAATAATATTTCTTCAGAGATTTTCATGCTATAACATAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCGATAATAATATTTCTTCAGAGATTTTCATGCTATAACATAGAC  600

seq1  ATACAAATAAAATAAGCTGTTAATTTTAAATAGTATTGTATATTATATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAATAAAATAAGCTGTTAATTTTAAATAGTATTGTATATTATATGC  650

seq1  AGGCATTGGGATTCCCAGAAATGAGGTCAATAAATTTTAACTGAGGAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTGGGATTCCCAGAAATGAGGTCAATAAATTTTAACTGAGGAATT  700

seq1  AGACTTATCAACCCATTACTGTGCTCAGAAAGTGGAGAGAGATTAAGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTATCAACCCATTACTGTGCTCAGAAAGTGGAGAGAGATTAAGCAT  750

seq1  AAAAGAGAGGTCAGAGGTAAGGAAGAAAACAAAGGACAAGGAAAGCAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGAGGTCAGAGGTAAGGAAGAAAACAAAGGACAAGGAAAGCAGAA  800

seq1  AGAAATGAAAATATG-AAAGGGGAGGGGAGAGAAAAAGAATAAGGAAAAC  849
      ||||||||||||||| |||||||||||||||| |||||||||||||||||
seq2  AGAAATGAAAATATGAAAAGGGGAGGGGAGAG-AAAAGAATAAGGAAAAC  849

seq1  TAAG-AAGGTAGAATATAGGTAGAAATAAAAAATAATGATAAGAAGATAA  898
      |||| |||||||||||||||||||||| |||||||||||| || ||||||
seq2  TAAGAAAGGTAGAATATAGGTAGAAAT-AAAAATAATGATTAGGAGATAA  898

seq1  AGAAGAAAAGAGAGAGCAGGAAGAAAATAAGAAGAAGGAAATGTAAAGGG  948
      ||||| |||||||||||||| |||||   ||| | | |||||||||||||
seq2  AGAAG-AAAGAGAGAGCAGG-AGAAA--TAGATG-ATGAAATGTAAAGGG  943

seq1  ATGAAGAGAAGGAAAATTGTTTCACAGAGCTTTTCAAGATTAAATGATAT  998
      ||| |||||  | ||||||||||||| |||||    ||| ||||||||||
seq2  ATG-AGAGA--GGAAATTGTTTCACAAAGCTT---CAGA-TAAATGATAT  986

seq1  GGAGAAAAATGTAATAAATGAAATCAAGTAAATCTAATGTGTGGCAGGAT  1048
      ||||  |||||||||||||| |||| ||||||||| |||||||||| |||
seq2  GGAG--AAATGTAATAAATG-AATC-AGTAAATCT-ATGTGTGGCA-GAT  1030

seq1  GACAATGCTTCATGATTGGAGCC  1071
      ||| |||| |||||| |||||||
seq2  GAC-ATGC-TCATGA-TGGAGCC  1050


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