BAC Information

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BAC

Clone NameB6Ng01-076F10
Chromosome1 (Build37)
Map Location 48,554,238 - 48,554,761
singlet/doubletsinglet
Overlap geneLOC674566
Upstream geneLOC666869, LOC546734
Downstream geneLOC100041936, LOC666903, LOC666909, 2900045O20Rik, LOC666924, C230029F24Rik, LOC627430
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076F10.bB6Ng01-076F10.g
ACCDH892636DH892637
length1,1211,063
definitionDH892636|Mus musculus domesticus DNA, BAC clone: B6Ng01-076F10, 5' end.DH892637|Mus musculus domesticus DNA, BAC clone: B6Ng01-076F10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatcttcccaagacttttatcatgaatgggtgttggatcttg
ttaaatgctttttctgcatctaacgagatgatcatgtggtttttatcctt
gaatttgtttatgtaatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctgcttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgcctatttttgc
atcgatattcataagagaaattggtctgaagttctctatctctgttggat
ctttctgtgttttaggtatcagagtaattgtggcttcataaaatgagttg
ggtgtagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aaatagatcttctttgaaggtctgatagaactctgcactaaactcctctg
gtcctgggctttttttggctgggagactattaatgactgcttctatttct
ttaggggatatgggactgtttagatggttatcttgatcctgatttaactt
tggtacctggtatctgtctagaaacctttccatttcatccaggttctcca
gttttgttgagtatagtcttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttcagattttgttaat
taggattttgtccttgtgccctctagtgagtctagctaagtgcttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagtcttcttgtttccacttggttgatttcacccctgagtttgattatt
tcctgccgtctactcctcttggatgatttgcttccttttttttctagagc
ttttagttgtgttgtcaagctgctagtatgtgctctctcctgtttcttct
cggagggactcagagctatgagtttccttcttagaaatgctttcattgtg
ttccataggttggggtatgtgtggcttcatttcatttaacctctatatag
cttaattccttattccattctttgactaggtatcatttgaaatgatggtt
attcagtttccacgtgaaagt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactatggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatagatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggaa
ctaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaaggatgggaccatgtagacactaccatatccggggatccatcccataa
tcagctttccaaatgctgacaccattgcatacactagcaagattatgctg
aaagaccctgatatagctgtctcttgtcagagtattgcctgggcctagca
aacatagaagtggatgctcacagtcggctatggatggatcacatggcccc
aatgaaggagcttagaaagtaccaaagaagctaaaggattctgcaaccta
ttggtggaacaacatttatgaatctaacagtatcccgaagttcttgaccc
ttgcttgctatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_48554238_48554761
seq2: B6Ng01-076F10.b_653_1168 (reverse)

seq1  ACATTCACGTGGAAACTGAATAACACTCTTCTC-AATGATACCTTGGTCA  49
      || |||||||||||||||||||||  || | || ||||||||| | ||||
seq2  ACTTTCACGTGGAAACTGAATAACCATCATTTCAAATGATACC-TAGTCA  49

seq1  AGGAA-GGAATAAAGAAAGAAATTAAAGACTTTTTAGAGTTTAATGAAAA  98
      | ||| |||||     ||| ||||||   || | ||||| ||||   |||
seq2  AAGAATGGAAT-----AAGGAATTAA--GCTATATAGAGGTTAAATGAAA  92

seq1  TGAAGCCACAACGTACCCAAACCTATGGGACACAATGAAAGCATTTCTAA  148
      ||||||||| || ||||| ||||||||| |||||||||||||||||||||
seq2  TGAAGCCAC-ACATACCCCAACCTATGGAACACAATGAAAGCATTTCTAA  141

seq1  GAGGGAAACTCATAGCTCTGAGTGCCTCCAAGAAGAAACGGGAGACAGCA  198
      || |||||||||||||||||||| ||||| ||||||||| ||||| ||||
seq2  GAAGGAAACTCATAGCTCTGAGTCCCTCCGAGAAGAAACAGGAGAGAGCA  191

seq1  CATACTAGCAGCTTGACAACACATCTAAAAGCCCTAG-AAAAAAAGGAAG  247
      ||||||||||||||||||||||| |||||||| |||| ||||||||||||
seq2  CATACTAGCAGCTTGACAACACAACTAAAAGCTCTAGAAAAAAAAGGAAG  241

seq1  CAAATTCACCCAAGAGGAGTAGACGGCAGGAAATAATCAAACTCAGGGGT  297
      |||| ||| |||||||||||||||||||||||||||||||||||||||||
seq2  CAAA-TCATCCAAGAGGAGTAGACGGCAGGAAATAATCAAACTCAGGGGT  290

seq1  GAAATCAACCAAGTGGAAACAAGAAGAACTATTCAAAGAATTAACCAAAC  347
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GAAATCAACCAAGTGGAAACAAGAAG-ACTATTCAAAGAATTAACCAAAC  339

seq1  GAGGAGTTGGTTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCTA  397
      ||||||||||||||||||||||||||||||||||||||| | ||||||||
seq2  GAGGAGTTGGTTCTTTGAGAAAATCAACAAGATAGATAAGCACTTAGCTA  389

seq1  GACTCACTAAAGGGCACAGGGACAAAATCCTAATTAACAAAATCAGAAAT  447
      ||||||||| |||||||| ||||||||||||||||||||||||| |||||
seq2  GACTCACTAGAGGGCACAAGGACAAAATCCTAATTAACAAAATCTGAAAT  439

seq1  GAAAAGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACACCATCAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACACCATCAG  489

seq1  ATCCTTCTACAAAAGGCTATACTCAAC  524
      ||||||||||||||| |||||||||||
seq2  ATCCTTCTACAAAAGACTATACTCAAC  516