BAC Information

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BAC

Clone NameB6Ng01-076F15
Chromosome1 (Build37)
Map Location 189,009,430 - 189,010,511
singlet/doubletsinglet
Overlap geneSpata17
Upstream geneTgfb2, Rrp15, LOC666832, LOC100042375, D1Pas1
Downstream geneGpatch2, Esrrg, 9330162B11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076F15.bB6Ng01-076F15.g
ACCDH892644DH892645
length1,2711,084
definitionDH892644|Mus musculus domesticus DNA, BAC clone: B6Ng01-076F15, 5' end.DH892645|Mus musculus domesticus DNA, BAC clone: B6Ng01-076F15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccattgcattggcattacttcaaaccaaagaaaataataagcaca
aatgagactctagaaagactctagaaaacaagcagataaaactagaaaga
aagaaaaaagatataatttaataaattataaacacaactaagaacataaa
ccaggaaacacacacacactcgcaaacatgaatatgattagaatctacac
acacatttcaataatgaatctaactgctaatgtccttacctttccagtga
aaagacatgggctatctgaatagataaagaaataaaatctgtctgttgtt
tataagaaactctaaaaaactgtattccatcaacatagatttaaaaatcc
tcaataaatactagcaaactgaatacaggtacattacaaaaatattattc
accaaaatcaagttggcttactcccaaaatgcagggatggttcaacaatc
aataaatataataaaattataataaatcatataaatggatttaaaagatc
aaatgactatctcaatagatacagaaaaatcatttgacaaaaatccaaca
tacttacataataaactcccaggaagagtaggagtggaggaaacacacct
caccgtaagaaatgccacataccacaagcccataggcagaactgtcctca
gtggggaaccttccaaagcaatcccattaaggttagaagcggacaggggc
atctactgttcctacttcttgtcaatagtgctggtaacactggctgttac
aatatggcaagagagggaagtttaaaaacacaaactaggaaaagtaaaac
tttccctattacagatgatatagtatacataggaagtcccaaactatttc
caccagaaaacttttagaaacaagcttcatccaagtgtcaagacacaaaa
tcaactcacaaagattagtagcctatctctataccaacaatatacatact
gagaaagagattgttgaaacatgtccagttacaactgtatgaaagacagc
aaactactgtggaataaacctaagagatgatggagcaccatagtgagaag
ctcaaattttctgaggaaaaggacgagaaaaccacagaaatggaaagaaa
cccaagttcatgaatttgtagaataatgtttataaacgatccttattcca
aaggcccatttcaatatagaatgaaccttatcaagaatttccaacatctc
ccggaatagaacaattccacggggaaccgaagagtgctgctccattgcgc
gaattttccaggcctcaccat
gaattcttctcatttatctgactcctcgttataaattatttcatagaaag
agaaagaaggtgtaagaaagagatacagacaggcaaagaggcagagagat
aaagaaagcaatatagacatattcttgccagcaatcattattcggctgga
gaaatgaaagttgtgtgcccatgcttcggcttagaattgcatcacactca
ctcctaggataaaccattcaagtgtgtgcgttacagttaaagcgtttcat
gttacacaacgaggagtttgtgaaggtcttttttatttcaaaggacttaa
taaaagtattactttgtacaaatcagtgtgatgaagatatttgagtggag
caaaaataagaagtgagtatgaacacttacagttaaaagaaaagacaacc
cgagtgtgctccagggataaccagagagaatggatggaatgaggggctca
cgtcttccaagcaaaatacaggagccactgtagagctaggggcacaaagg
cttcttagaatcagcttgtattctcagtgttaaaatgcccacagggtgat
cccttactgaacagagccagtggccaacaaatcagaaaggctgactctta
taaatcacaaacatggacactgtgctcaaattttgccaaattagaaattc
cacatgagtatcaggcatatcagaaaaatatttatcagataaataagtag
cttttcaataggaatatgtgtcccatgggcagatctgaagaatattctaa
aaaaattggcctaggtgatatggcaaggaccacaggaggttgacgttgac
cacatgatagtctctgacctgaggattttttcctcttttcacttcaggga
ttcttgctctgccttgcgcacacagtgtctgtcagtcttcttcaccttct
tttcccgtttttcccccattcccttttggcctcagtgagtgggcacctta
tttgcattataatgaaacaatgtgctttccctatgcttagtactatgaca
tatgtcaccttgctatttacaatgtacttgcagtctttaataagaaaagg
aataaagggactggcaaatagtaaagaaagtaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_189009430_189010511
seq2: B6Ng01-076F15.g_70_1153 (reverse)

seq1  TTTACTTTCTTTACTATTTGCCAGT-CCTTTA-TCCCTTTCTTA-TAGAG  47
      ||||||||||||||||||||||||| |||||| ||| ||||||| || ||
seq2  TTTACTTTCTTTACTATTTGCCAGTCCCTTTATTCCTTTTCTTATTAAAG  50

seq1  ACTGCAAGTACATTGTAAATAGCAAGGTGACATATGTCATAGTACTAAGC  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAAGTACATTGTAAATAGCAAGGTGACATATGTCATAGTACTAAGC  100

seq1  ATAGGGAAAGCACATTGTTTCATTATAATGCAAATAAGGTGCCCACTCAC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGAAAGCACATTGTTTCATTATAATGCAAATAAGGTGCCCACTCAC  150

seq1  TGAGGCCAAAAGGGAATGGGGGAAAAACGGGAAAAAGAAGGTGAAGAAGA  197
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGAGGCCAAAAGGGAATGGGGGAAAAACGGG-AAAAGAAGGTGAAGAAGA  199

seq1  CTGACAGACACTGTGTGCGCAAGGCAGAGCAAGAATCCCTGAAGTGAAAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGACACTGTGTGCGCAAGGCAGAGCAAGAATCCCTGAAGTGAAAA  249

seq1  GAGGAAAAAATCCTCAGGTCAGAGACTATCATGTGGTCAACGTCAACCTC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAAAATCCTCAGGTCAGAGACTATCATGTGGTCAACGTCAACCTC  299

seq1  CTGTGGTCCTTGCCATATCACCTAGGCCAATTTTTTTAGAATATTCTTCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTCCTTGCCATATCACCTAGGCCAATTTTTTTAGAATATTCTTCA  349

seq1  GATCTGCCCATGGGACACATATTCCTATTGAAAAGCTACTTATTTATCTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCCCATGGGACACATATTCCTATTGAAAAGCTACTTATTTATCTG  399

seq1  ATAAATATTTTTCTGATATGCCTGATACTCATGTGGAATTTCTAATTTGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATTTTTCTGATATGCCTGATACTCATGTGGAATTTCTAATTTGG  449

seq1  CAAAATTTGAGCACAGTGTCCATGTTTGTGATTTATAAGAGTCAGCCTTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTTGAGCACAGTGTCCATGTTTGTGATTTATAAGAGTCAGCCTTT  499

seq1  CTGATTTGTTGGCCACTGGCTCTGTTCAGTAAGGGATCACCCTGTGGGCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTGTTGGCCACTGGCTCTGTTCAGTAAGGGATCACCCTGTGGGCA  549

seq1  TTTTAACACTGAGAATACAAGCTGATTCTAAGAAGCCTTTGTGCCCCTAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACACTGAGAATACAAGCTGATTCTAAGAAGCCTTTGTGCCCCTAG  599

seq1  CTCTACAGTGGCTCCTGTATTTTGCTTGGAAGACGTGAGCCCCTCATTCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACAGTGGCTCCTGTATTTTGCTTGGAAGACGTGAGCCCCTCATTCC  649

seq1  ATCCATTCTCTCTGGTTATCCCTGGAGCACACTCGGGTTGTCTTTTCTTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTCTCTCTGGTTATCCCTGGAGCACACTCGGGTTGTCTTTTCTTT  699

seq1  TAACTGTAAGTGTTCATACTCACTTCTTATTTTTGCTCCACTCAAATATC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGTAAGTGTTCATACTCACTTCTTATTTTTGCTCCACTCAAATATC  749

seq1  TTCATCACACTGATTTGTACAAAGTAATACTTTTATTAAGTCCTTTGAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCACACTGATTTGTACAAAGTAATACTTTTATTAAGTCCTTTGAAA  799

seq1  TAAAAAAGACCTTCACAAACTCCTCGTTGTGTAACATGAAACGCTTTAAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAGACCTTCACAAACTCCTCGTTGTGTAACATGAAACGCTTTAAC  849

seq1  TGTAACGCACACACTTGAATGGTTTATCCTAGGAGTGAGTGTGATGCAAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACGCACACACTTGAATGGTTTATCCTAGGAGTGAGTGTGATGCAAT  899

seq1  TCTAAGCCGAAGCATGGGCACACAACTTTCATTTCTCCAGCCGAATAATG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGCCGAAGCATGGGCACACAACTTTCATTTCTCCAGCCGAATAATG  949

seq1  ATTGCTGGCAAGAATATGTCTATATTGCTTTCTTTATCTCTCTGCCTCTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGGCAAGAATATGTCTATATTGCTTTCTTTATCTCTCTGCCTCTT  999

seq1  TGCCTGTCTGTATCTCTTTCTTACACCTTCTTTCTCTTTCTATGAAATAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTCTGTATCTCTTTCTTACACCTTCTTTCTCTTTCTATGAAATAA  1049

seq1  TTTATAACGAGGAGTCAGATAAATGAGAAGAATTC  1082
      |||||||||||||||||||||||||||||||||||
seq2  TTTATAACGAGGAGTCAGATAAATGAGAAGAATTC  1084