BAC Information

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BAC

Clone NameB6Ng01-076O04
Chromosome1 (Build37)
Map Location 73,413,534 - 73,414,711
singlet/doubletsinglet
Overlap genenone
Upstream geneXrcc5, March4, Smarcal1, Ankar, Rpl37a, Igfbp2, Igfbp5, LOC672187, LOC100042860, Tnp1, 1700027A15Rik
Downstream genePinc, LOC672208, LOC100043291, Tns1, Rufy4, Il8rb, Il8ra, Arpc2, Gpbar1, Aamp, Pnkd, Tmbim1, 2410125D13Rik, Gm216
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076O04.bB6Ng01-076O04.g
ACCDH893018DH893019
length1,1711,068
definitionDH893018|Mus musculus domesticus DNA, BAC clone: B6Ng01-076O04, 5' end.DH893019|Mus musculus domesticus DNA, BAC clone: B6Ng01-076O04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagatcctcctgtttgtgcagcaaacattttacccactgagtcat
ctccctatcatctgcccttgaccctccttgaactgcactgaatttctacc
ctttgacacccctgctgaatcctaagctgaaatctgtccagcacttcatg
gaacaggtaggcctgatacctacaacttagagtctattttcatcctctca
actggttataaaccctctcaggagccagaacagtgcccccaaaggctttt
aggttcaaatgctgattctatcaggatttgagatcacaggcaaatcactc
ttcattccacatccctcccccacttctgggcctaggaaaatagagattat
taatcagttagtaaatgagataatatacatttaacctggtgcctgaaaca
ttcaagcatacagaaaatttgaagaattgtggcagatgctactggaattc
cacccacatttccatcctcaaagttgctttgatatatttgtcactctcta
catagccactagaatatgctgagttctcatataaggaagaccagacaggc
ttgagacataatctcccaagaagctaccgtcagccaatctacaataactc
tgaaacacattccatatactggcagtgtatactctgttgtctcctggaat
cctccagcaactcaaacgccagctgccccccagtaatgggcatattgggc
cccttctgtcagcttgcctttgctgacctctcacttccctcaatgtgttt
ccagaaaccagttaccaaagacactacttgtacttgtctgggagacaagg
tgaatctaaacctgtgacagagcttgttgttagcagtggcttctttccct
gaaatccatcagtgtgctttgtttccacaatcttctggtggtcagtgtac
accctgaaaatgcttcaaagtccacagaaaaactaaaaccagaacccaaa
tgccaacaggcccatgcagaggaaattacttagtctgcctgggaagtgaa
gaaagagttcagagaagtccctcaatgaacataaaaataaagcaaaaact
atgttgttgtcactagaaaacaaaaattcctggggacaggatctactcta
cactgaagccacttcgaaatcactcccaagaactctgaagaaacacccac
gtactgtggttgtcttctgga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccccgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccatatttgtgg
gattgcaggcttgtacaaccactctggaaatcagtctggcggttcctcag
aaaactggatatagtactaccggaggatccagtaatacctctcctgggca
tatatccagaagatgccccaactggtaagaaggacacatgctccgctatg
ttcatagcagccttatttataatagccagaagctggaaggaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctagccaaa
tggatggacctggagggcatcatcctgagtgaggtaacacattcacaaag
gaactcacacaatatgtactcattgataagtggatattagcccaaaacct
aggatatccaagatataagatacaatttcctaaacacatgaatctcaaga
aaaaatgaagaccgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaagatggaccatgtagagactgccatatccggggatccatcccatcaat
cagcttccaaatgctgacaccattgcatacactagcaagattatgctgaa
aggaccctgatatagctgtctcttgtcaagtatgcctgggcctagcaaac
atagaagtggatgctcacagtcggctatggatggatcacatggcccccat
gaaggagctagagaaagtacccaagaagcttaaagggatttgcaacctta
tagtggaacaacattattgaactacccagtaccctggagctcttggactc
tagtggcatatgtattca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_73413534_73414711
seq2: B6Ng01-076O04.b_47_1217

seq1  GAATTCAGATCCTCCTGTTTGTGCAGCAAACATTTTACCCACTGAGTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATCCTCCTGTTTGTGCAGCAAACATTTTACCCACTGAGTCAT  50

seq1  CTCCCTATCATCTGCCCTTGACCCTCCTTGAACTGCACTGAATTTCTACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTATCATCTGCCCTTGACCCTCCTTGAACTGCACTGAATTTCTACC  100

seq1  CTTTGACACCCCTGCTGAATCCTAAGCTGAAATCTGTCCAGCACTTCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACACCCCTGCTGAATCCTAAGCTGAAATCTGTCCAGCACTTCATG  150

seq1  GAACAGGTAGGCCTGATACCTACAACTTAGAGTCTATTTTCATCCTCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGGTAGGCCTGATACCTACAACTTAGAGTCTATTTTCATCCTCTCA  200

seq1  ACTGGTTATAAACCCTCTCAGGAGCCAGAACAGTGCCCCCAAAGGCTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTTATAAACCCTCTCAGGAGCCAGAACAGTGCCCCCAAAGGCTTTT  250

seq1  AGGTTCAAATGCTGATTCTATCAGGATTTGAGATCACAGGCAAATCACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCAAATGCTGATTCTATCAGGATTTGAGATCACAGGCAAATCACTC  300

seq1  TTCATTCCACATCCCTCCCCCACTTCTGGGCCTAGGAAAATAGAGATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCCACATCCCTCCCCCACTTCTGGGCCTAGGAAAATAGAGATTAT  350

seq1  TAATCAGTTAGTAAATGAGATAATATACATTTAACCTGGTGCCTGAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGTTAGTAAATGAGATAATATACATTTAACCTGGTGCCTGAAACA  400

seq1  TTCAAGCATACAGAAAATTTGAAGAATTGTGGCAGATGCTACTGGAATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGCATACAGAAAATTTGAAGAATTGTGGCAGATGCTACTGGAATTC  450

seq1  CACCCACATTTCCATCCTCAAAGTTGCTTTGATATATTTGTCACTCTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACATTTCCATCCTCAAAGTTGCTTTGATATATTTGTCACTCTCTA  500

seq1  CATAGCCACTAGAATATGCTGAGTTCTCATATAAGGAAGACCAGACAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCCACTAGAATATGCTGAGTTCTCATATAAGGAAGACCAGACAGGC  550

seq1  TTGAGACATAATCTCCCAAGAAGCTACCGTCAGCCAATCTACAATAACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACATAATCTCCCAAGAAGCTACCGTCAGCCAATCTACAATAACTC  600

seq1  TGAAACACATTCCATATACTGGCAGTGTATACTCTGTTGTCTCCTGGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACACATTCCATATACTGGCAGTGTATACTCTGTTGTCTCCTGGAAT  650

seq1  CCTCCAGCAACTCAAACGCCAGCTGCCCCCCAGTAATGGGCATATTGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGCAACTCAAACGCCAGCTGCCCCCCAGTAATGGGCATATTGGGC  700

seq1  CCCTTCTGTCAGCTTGCCTTTGCTGACCTCTCACTTCCCTCAATGTGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTGTCAGCTTGCCTTTGCTGACCTCTCACTTCCCTCAATGTGTTT  750

seq1  CCAGAAACCAGTTACCAAAGACACTACTTGTACTTGTCTGGGAGACAAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAACCAGTTACCAAAGACACTACTTGTACTTGTCTGGGAGACAAGG  800

seq1  TGAATCTAAACCTGTGACAGAGCTTGTTGTTAGCAGTGGCTTCTTTCCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTAAACCTGTGACAGAGCTTGTTGTTAGCAGTGGCTTCTTTCCCT  850

seq1  GAAATCCATCAGTGTGCTTTGTTTCCACAATCTTCTGGTGGTCAGTGTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCCATCAGTGTGCTTTGTTTCCACAATCTTCTGGTGGTCAGTGTAC  900

seq1  ACCCTGAAAATGCTTCAAAGTCCACAGAAAAACTAAAACCAGAACCCAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGAAAATGCTTCAAAGTCCACAGAAAAACTAAAACCAGAACCCAAA  950

seq1  TGCCAACAGGGCCCATGCAGA-GAAATTACTTAGTCTGCCCTGGGAAGTG  999
      |||||||| |||||||||||| |||||||||||||||| |||||||||||
seq2  TGCCAACA-GGCCCATGCAGAGGAAATTACTTAGTCTG-CCTGGGAAGTG  998

seq1  AAGAAAGAGTTCAGAG-AGTCACTCAATGAACATAAAAATAGAGCAAAGA  1048
      |||||||||||||||| |||| ||||||||||||||||||| |||||| |
seq2  AAGAAAGAGTTCAGAGAAGTCCCTCAATGAACATAAAAATAAAGCAAAAA  1048

seq1  CTATTGTTGGTTTGTCACTAG-ACACACAATTCCCCTTGGGGACA-GATC  1096
      ||| |||||  |||||||||| | ||| || | ||  |||||||| ||||
seq2  CTA-TGTTG--TTGTCACTAGAAAACAAAAATTCC--TGGGGACAGGATC  1093

seq1  TACCTCCTACACCTGAAGCCACTCCAGATTCACTCCCAGGACCTCTGAGG  1146
      |||   ||||| ||||||||||| |  | ||||||||| || |||||| |
seq2  TAC--TCTACA-CTGAAGCCACTTCGAAATCACTCCCAAGAACTCTGAAG  1140

seq1  ACAC-CACACCTACCTGTGGTTGTCTTCCTGGA  1178
      | || | ||| || ||||||||||||| |||||
seq2  AAACACCCACGTA-CTGTGGTTGTCTT-CTGGA  1171