BAC Information

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BAC

Clone NameB6Ng01-080O19
Chromosome1 (Build37)
Map Location 183,247,567 - 183,248,572
singlet/doubletsinglet
Overlap genenone
Upstream geneEG277333, Itpkb, 6330403A02Rik, Gm821, Parp1, Lin9, Mixl1, LOC666431, Acbd3, H3f3a, BC031781, Lefty2, Pycr2, Lefty1, Tmem63a, Ephx1, 9130409I23Rik, EG625597, Fgfr3-ps, Nvl, Cnih4, Wdr26, LOC100042363, LOC666519
Downstream geneCnih3, Ccdc121, A230079K17Rik, Lbr, EG433384, Enah, Srp9, EG625823, Degs1, 1700047M11Rik, Fbxo28
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080O19.bB6Ng01-080O19.g
ACCDH895928DH895929
length1,009173
definitionDH895928|Mus musculus domesticus DNA, BAC clone: B6Ng01-080O19, 5' end.DH895929|Mus musculus domesticus DNA, BAC clone: B6Ng01-080O19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcagtgctgtgcaggtaaggaggggaggggggtagccttcacct
cccctagtggggtagcaatgtcactattatgtaagctgggattctaggta
gacagttctgcctcaaaccctatctattaacaatccccttttgtttccta
gttcattttataaaagataaacatgggttatcatgttatgaaactatctt
gtttatgactgaccatctatttcctatgttggaacatgagaacttttagg
gccaggagccaaatctgcctgccttgccaccctccctccctcttccctcc
tcctctccttttttctccctccccatccctctttccttccttccatctct
ccccttctccctgtgtctctctccctccttcctttcttccttttccccct
taaagttgtaaaatgtatctacagttgagagaaatgtataaaatgtaaca
ggaagtttgacattattattagacattcagatcaaaagcagactcttgga
ctccatagtggagcacatacctagagcgtctgaggccctggcttcagtcc
ccagcaccaccgacacccagacccctgccagcatcccaagacagccatct
gcctaaaagccacaagtatccatcttaaatgataatcacatccgtctgtt
ttcacaatagtcttaccacttaagtgtgccttcctaaactttacattttt
ttgttttcatctggttttgaactttggttacaacaccacatggtatcctg
aaattcacccacactgttcatgccagccttggtacactccatgccactat
tttgtgccagggaaggaacatatcccaatgtatttcttcttatgatcctc
ctactagatgcttatttcttaacagcaatgatggataatgctactgtagc
attcctgcacatatctttcctgggcacattgtagttgtgtggaatcacct
ctccatacttccaccctactctcaggaagtagaatttctggctcacaagt
gggggggag
agaggcaacggaagatcatgacttaattagagggctacacagcaaaccac
aatttctcctctctctctctctctctctctctctctctctctctctctct
ctctctctctctctctctaaaaaacactctctcgggggggagagatgcac
tccctcagaaagagagactcccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_183247567_183248572
seq2: B6Ng01-080O19.b_48_1056

seq1  GAATTCTCAGTGCTGTGCAGGTAAGGAGGGGAGGGGGGTAGCCTTCACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGTGCTGTGCAGGTAAGGAGGGGAGGGGGGTAGCCTTCACCT  50

seq1  CCCCTAGTGGGGTAGCAATGTCACTATTATGTAAGCTGGGATTCTAGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAGTGGGGTAGCAATGTCACTATTATGTAAGCTGGGATTCTAGGTA  100

seq1  GACAGTTCTGCCTCAAACCCTATCTATTAACAATCCCCTTTTGTTTCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTTCTGCCTCAAACCCTATCTATTAACAATCCCCTTTTGTTTCCTA  150

seq1  GTTCATTTTATAAAAGATAAACATGGGTTATCATGTTATGAAACTATCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTTTATAAAAGATAAACATGGGTTATCATGTTATGAAACTATCTT  200

seq1  GTTTATGACTGACCATCTATTTCCTATGTTGGAACATGAGAACTTTTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATGACTGACCATCTATTTCCTATGTTGGAACATGAGAACTTTTAGG  250

seq1  GCCAGGAGCCAAATCTGCCTGCCTTGCCACCCTCCCTCCCTCTTCCCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGAGCCAAATCTGCCTGCCTTGCCACCCTCCCTCCCTCTTCCCTCC  300

seq1  TCCTCTCCTTTTTTCTCCCTCCCCATCCCTCTTTCCTTCCTTCCATCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCCTTTTTTCTCCCTCCCCATCCCTCTTTCCTTCCTTCCATCTCT  350

seq1  CCCCTTCTCCCTGTGTCTCTCTCCCTCCTTCCTTTCTTCCTTTTCCCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTCTCCCTGTGTCTCTCTCCCTCCTTCCTTTCTTCCTTTTCCCCCT  400

seq1  TAAAGTTGTAAAATGTATCTACAGTTGAGAGAAATGTATAAAATGTAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTGTAAAATGTATCTACAGTTGAGAGAAATGTATAAAATGTAACA  450

seq1  GGAAGTTTGACATTATTATTAGACATTCAGATCAAAAGCAGACTCTTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTTTGACATTATTATTAGACATTCAGATCAAAAGCAGACTCTTGGA  500

seq1  CTCCATAGTGGAGCACATACCTAGAGCGTCTGAGGCCCTGGCTTCAGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATAGTGGAGCACATACCTAGAGCGTCTGAGGCCCTGGCTTCAGTCC  550

seq1  CCAGCACCACCGACACCAAGACCCCTGCCAGCATCCCAAGACAGCCATCT  600
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCAGCACCACCGACACCCAGACCCCTGCCAGCATCCCAAGACAGCCATCT  600

seq1  GCCTAAAAGCCACAAGTATCCATCTTAAATGATAATCACATCCGTCTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAAAAGCCACAAGTATCCATCTTAAATGATAATCACATCCGTCTGTT  650

seq1  TTCACAATAGTCTTACCACTTAAGTGTGCCTTCCTAAACTTTACATTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAATAGTCTTACCACTTAAGTGTGCCTTCCTAAACTTTACATTTTT  700

seq1  ---GTTTCATCTGGTTTTGAACTTTGGTTACAACACCACATGGTATCCTG  747
          ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTCATCTGGTTTTGAACTTTGGTTACAACACCACATGGTATCCTG  750

seq1  AAATTCACCCACACTG-TCATGCCAGCCTTGGTACACTCCATGCCACTAT  796
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAATTCACCCACACTGTTCATGCCAGCCTTGGTACACTCCATGCCACTAT  800

seq1  TTTGTGCCAGGGAAGGAACATATCCCAATGTATTTCTTCTCTATGATCCT  846
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTTGTGCCAGGGAAGGAACATATCCCAATGTATTTCTTCT-TATGATCCT  849

seq1  CCTACTAGATGCTTATTTCTTAACAGCAATGATGGATAATGCTACTGTAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTAGATGCTTATTTCTTAACAGCAATGATGGATAATGCTACTGTAG  899

seq1  CATTCCTGCACATATCTTTCCTGGGCACATTGTAGTTGTGTGGTATCACC  946
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CATTCCTGCACATATCTTTCCTGGGCACATTGTAGTTGTGTGGAATCACC  949

seq1  TCTCCATACTTCCACCCTACTCTCCAGGAGTAGAATTTCTGGCTCACAAG  996
      ||||||||||||||||||||||||  | ||||||||||||||||||||||
seq2  TCTCCATACTTCCACCCTACTCTCAGGAAGTAGAATTTCTGGCTCACAAG  999

seq1  TTGGGGGGAG  1006
      | ||||||||
seq2  TGGGGGGGAG  1009