BAC Information

Click to search

BAC

Clone NameB6Ng01-082L23
Chromosome1 (Build37)
Map Location 125,995,018 - 125,996,077
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666983, Dpp10
Downstream geneLOC666998
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082L23.bB6Ng01-082L23.g
ACCDH897212DH897213
length1,0531,207
definitionDH897212|Mus musculus domesticus DNA, BAC clone: B6Ng01-082L23, 5' end.DH897213|Mus musculus domesticus DNA, BAC clone: B6Ng01-082L23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacacaatatgtactcactgataagtggatattagcccagaaact
tagaatacccaagataaaagatattatttttaatttttaaagacacattt
actcgtattttatgtatttgagtatttacttccttgcatatatgcatgct
gctatttgcattctttggccatggtgacctgagaggagatcagcagcctt
tgatctgcagttatagatgattatgggaatatatgggtaatgagagccaa
acctgggtccttttctagagcagtaactgcctgtttgtctaattcattac
tttgatccctcaaattaaaatttatgaatcattgggatcagtaaaatcag
atttaaatatatacatgaacatttaatatttgtgctaaatatataaacat
atgcataatcataaatgacttattaagattgcacacacacatttatgctg
tgttcaaacctgagtgtttcttctacctcatcttaaagaccattctttgg
cacaaaaataaattgtgtagatttttctaaaagttttaaattagctataa
tccagacaaagcaagataaagaatagttgtctgatttaggggtatgatca
acatctggccaattcatctattggtaagaagttatgaccccattgtgaag
actgatggaaatgcaaggttagacttttttttttttttgaaatttctttt
tgttttatttaactttatttatttatttatttatttatttattacatatt
ttcctcaattacatttccaatgctatcccaaaagtcccccacaccctcct
cccccactcccctacccacccattcccattttttggccctggcattcccc
ctgtactggggcatttgtatatggacttttgttgtaagaatatttatttt
cgagctgggcatggtgcacacgcctttaatcccatcactcagaagcagaa
gcagcgatttctgagttagagatcaagatcagcctggtctacaaagtgag
ttcaagacagccagggtatacaagagaaccctgttcctcgtgagaaaaaa
aaa
gaattcatggcacatacctaagcatgtgaaagccatatacagaaaaccaa
caaacaacatcaaatgaaatggagagaaagtcaaagcaatcccattaaaa
tcagggacaagacaaggctgccaactctcttccttcctatacaatatagt
acttgaagttccagctagagcaataagagaacaaaaagagatcaatgggg
atatgtattagaaaggaagaagtcaaggtgtaactgtttgtagataagat
acataaatgacccccaaaattctaacagaaaaccactacatctgatgaac
aacttaatcaaagtgccaggataaaaaattaactaaaataaatcagtagg
tttcctttatatatattataaacaggctgtgaaagaaatcaggtaaatac
taccttcacaatagccacaaataatataaactatttttgtgtaattgtaa
ccattcaagtgaaagatctatatgacaagaattccaagaaattcgagaat
acctcagaaaactgaaataccccctatgctcatggattgataagaatacc
aaaagcaatctacagattcaatgcaatctccatcaaaattccaacacaat
tcttcacagacatggaaaaaacaattttcaacttcatatcccaggatagc
ctgaacaattctcaacaataaaaggtcttctgagggaatcaccattcctg
acctcaagctgtgcaacaaagcaatagtgatgaagaccacacggtactgg
tacagagacagacaaattgatcaaaggaatagaattggagagccagaaat
aaatgcagacacggatggacacttaacctttgacaataaagtcaaaagca
taaagtagataaaagaaagcttcttcaataaactgtgctatctaactgat
ggtctgcatgtagaaaactgaaaattgatccatatttatcattttgcaca
aagtgcaattccaagtggatcaggacctcaacataaaaccagatacgctg
attctaatagaaggacaagaggaaagagcctcgaacctcattggtatcag
gtaaattttctgaacagaacatccatggtcagcctctagaatgaaggtct
tagccaatggataattaataatcctgcgtgagtaccatcacaaagaaccc
atgatgcctcctgcagtggattagccagcctggtaatacccagaatacat
ctctcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_125995018_125996077
seq2: B6Ng01-082L23.b_50_1102 (reverse)

seq1  TTTTTTTTTCTTTTTTTCGAG--ACAGGGTTTCTC-TGTATACCCCTGGC  47
      ||||||||||    |  ||||  |||||| ||||| |||||| |||||||
seq2  TTTTTTTTTC----TCACGAGGAACAGGG-TTCTCTTGTATA-CCCTGGC  44

seq1  TGTCCTGGAACTCACTTTGTAGACCAGGCTGATC-TGATCTCTAACTCAG  96
      ||| || ||||||||||||||||||||||||||| |||||||||||||||
seq2  TGT-CTTGAACTCACTTTGTAGACCAGGCTGATCTTGATCTCTAACTCAG  93

seq1  AAATCCGCCTGCTTCTGCCTTCTGAGTGATGGGATTAAAGGCGTGTGCCA  146
      |||||   ||||||||| ||||||||||||||||||||||||||||| ||
seq2  AAATC--GCTGCTTCTG-CTTCTGAGTGATGGGATTAAAGGCGTGTG-CA  139

seq1  CCATGCCCAGCTCGAAAATAAATATTCTTACAACAAAAGTCCATATACAA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCCCAGCTCGAAAATAAATATTCTTACAACAAAAGTCCATATACAA  189

seq1  ATGCCCCAGTACA-GGGGAATGCCAGGGCCAAAAAATGGGAATGGGTGGG  245
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATGCCCCAGTACAGGGGGAATGCCAGGGCCAAAAAATGGGAATGGGTGGG  239

seq1  TAGGGGAGTGGGGGAGGAGGGTGTGGGGGACTTTTGGGATAGCATTGGAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGAGTGGGGGAGGAGGGTGTGGGGGACTTTTGGGATAGCATTGGAA  289

seq1  ATGTAATTGAGGAAAATATGTAATAAATAAATAAATAAATAAATAAATAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATTGAGGAAAATATGTAATAAATAAATAAATAAATAAATAAATAA  339

seq1  AGTTAAATAAAACAAAAAGAAATTTCAAAAAAAAAAAAAAAGTCTAACCT  395
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGTTAAATAAAACAAAAAGAAATTTC-AAAAAAAAAAAAAAGTCTAACCT  388

seq1  TGCATTTCCATCAGTCTTCACAATGGGGTCATAACTTCTTACCAATAGAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTCCATCAGTCTTCACAATGGGGTCATAACTTCTTACCAATAGAT  438

seq1  GAATTGGCCAGATGTTGATCATACCCCTAAATCAGACAACTATTCTTTAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGGCCAGATGTTGATCATACCCCTAAATCAGACAACTATTCTTTAT  488

seq1  CTTGCTTTGTCTGGATTATAGCTAATTTAAAACTTTTAGAAAAATCTACA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTTGTCTGGATTATAGCTAATTTAAAACTTTTAGAAAAATCTACA  538

seq1  CAATTTATTTTTGTGCCAAAGAATGGTCTTTAAGATGAGGTAGAAGAAAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTATTTTTGTGCCAAAGAATGGTCTTTAAGATGAGGTAGAAGAAAC  588

seq1  ACTCAGGTTTGAACACAGCATAAATGTGTGTGTGCAATCTTAATAAGTCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGTTTGAACACAGCATAAATGTGTGTGTGCAATCTTAATAAGTCA  638

seq1  TTTATGATTATGCATATGTTTATATATTTAGCACAAATATTAAATGTTCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGATTATGCATATGTTTATATATTTAGCACAAATATTAAATGTTCA  688

seq1  TGTATATATTTAAATCTGATTTTACTGATCCCAATGATTCATAAATTTTA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATATTTAAATCTGATTTTACTGATCCCAATGATTCATAAATTTTA  738

seq1  ATTTGAGGGATCAAAGTAATGAATTAGACAAACAGGCAGTTACTGCTCTA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGGGATCAAAGTAATGAATTAGACAAACAGGCAGTTACTGCTCTA  788

seq1  GAAAAGGACCCAGGTTTGGCTCTCATTACCCATATATTCCCATAATCATC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGACCCAGGTTTGGCTCTCATTACCCATATATTCCCATAATCATC  838

seq1  TATAACTGCAGATCAAAGGCTGCTGATCTCCTCTCAGGTCACCATGGCCA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTGCAGATCAAAGGCTGCTGATCTCCTCTCAGGTCACCATGGCCA  888

seq1  AAGAATGCAAATAGCAGCATGCATATATGCAAGGAAGTAAATACTCAAAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGCAAATAGCAGCATGCATATATGCAAGGAAGTAAATACTCAAAT  938

seq1  ACATAAAATACGAGTAAATGTGTCTTTAAAAATTAAAAATAATATCTTTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAATACGAGTAAATGTGTCTTTAAAAATTAAAAATAATATCTTTT  988

seq1  ATCTTGGGTATTCTAAGTTTCTGGGCTAATATCCACTTATCAGTGAGTAC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGGTATTCTAAGTTTCTGGGCTAATATCCACTTATCAGTGAGTAC  1038

seq1  ATATTGTGTGAATTC  1060
      |||||||||||||||
seq2  ATATTGTGTGAATTC  1053