BAC Information

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BAC

Clone NameB6Ng01-084G23
Chromosome1 (Build37)
Map Location 47,538,956 - 47,539,996
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc39a10, EG227061
Downstream geneLOC666869, LOC546734, LOC674566
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084G23.bB6Ng01-084G23.g
ACCDH898394DH898395
length1,2221,048
definitionDH898394|Mus musculus domesticus DNA, BAC clone: B6Ng01-084G23, 5' end.DH898395|Mus musculus domesticus DNA, BAC clone: B6Ng01-084G23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagacccatacctaaacatgataaaagcaatatacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaatttggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattctaccagagaactcctaaacc
tgatatacagcttcggtgaagtagctggatataaaataaactcaaacaat
tcaatggcatttctctatacaaagaataaagaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatcttggcg
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaaatct
ctgaagaaagaaattaaggaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaatcccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagctaaaagtcttctcaaggataaaagaactttctggcggaatc
accatgccagacctaaagctttactacagagcaattgtgataaaaactgc
atggtactggtatagagacagacaagtagaccaatggaatagaattgaag
acccagaaatgaacccacacacctatggtcactttgatcttcgacaaggg
agctaaaaccatccagtggaagaaagacagcatttttaaacaattggtgc
tgtcaacaactggttgttatcgtgtagaagaatgcgaatcgatccatact
tatcttcttgtactaggtcaaatctaagtgatcaggaacttcacataaac
ccagagacactgaacttatagagggagaagtggggaagcccttgaagaaa
ttggtcacagggcaaaattcctggaacagaacaggcatggcctgtgctgt
agaatcggaattgacatggactatgaactctcaagtctcgcaggcagaag
acactgctgtctatatgaagca
gaattcaactgtatattattttttaaggcacacttagattttgtagaact
gcaataaacttttaaatatctttcaactttttatttcattcttatactta
tcaagagcatagttattagagggaactctctacccatattaacagaacgt
gtggttattgcatgcttttgattattatgtattttgtaatatgttttaac
tataaaaactaaggtagatgatttgttaaatcccaataaacacacaaaaa
aggtgtttctttaaaaagatgatatacactgaaagggaagcatagatcaa
ccctattctttttttctgcccatttgtggcaatcattgcacggagatgat
tctcattcaatattataactcttgctggttaaaaatattccccaaaagaa
tgcacaatatgtctctcatagtgtggggagggtatttagagaaacatttc
cacacaattcagccccatctgttcattctaaaattaaacgctgtgggtta
ataatctgtattttcagaaaaaacaaaaaaacaaaaaaacaaggtgaaca
agtgtgaatactattataagacttttgggttttagcttaattgaagaaat
gtcttagtactgtttgacatgaaaatggagagctcacataatgaagaaat
aaatatttgatgttagagaatttaaatcaaacttaacatgaaaacttgtt
ttacaagttttacattaaattacatatttgagtaaaataataatttcttt
atactatgggagactgcttattttgtagtttgttataggactccattgtt
tatagttttctttatttatttattatttatttatttattattcatttttt
gtcctcatcacagcccctccccttctcccagtatcccctttacatgtcat
ctccaccattctccctctccttcatctaggagaatggtagaggtcccttc
ttgggtatcatcccatcaaggtaccttttaaggcacctgctcaactagaa
tatattcttttccttggagatcagattaatcaacacactaagaacaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_47538956_47539996
seq2: B6Ng01-084G23.g_71_1118

seq1  GAATTCAACTGTATATTATTTTTTAAGGCACACTTAGATTTTGTAGAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTGTATATTATTTTTTAAGGCACACTTAGATTTTGTAGAACT  50

seq1  GCAATAAACTTTTAAATATCTTTCAACTTTTTATTTCATTCTTATACTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATAAACTTTTAAATATCTTTCAACTTTTTATTTCATTCTTATACTTA  100

seq1  TCAAGAGCATAGTTATTAGAGGGAACTCTCTACCCATATTAACAGAACGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAGCATAGTTATTAGAGGGAACTCTCTACCCATATTAACAGAACGT  150

seq1  GTGGTTATTGCATGCTTTTGATTATTATGTATTTTGTAATATGTTTTAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTATTGCATGCTTTTGATTATTATGTATTTTGTAATATGTTTTAAC  200

seq1  TATAAAAACTAAGGTAGATGATTTGTTAAATCCCAATAAACACACAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAACTAAGGTAGATGATTTGTTAAATCCCAATAAACACACAAAAA  250

seq1  AGGTGTTTCTTTAAAAAGATGATATACACTGAAAGGGAAGCATAGATCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTTTCTTTAAAAAGATGATATACACTGAAAGGGAAGCATAGATCAA  300

seq1  CCCTATTCTTTTTTTCTGCCCATTTGTGGCAATCATTGCACGGAGATGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATTCTTTTTTTCTGCCCATTTGTGGCAATCATTGCACGGAGATGAT  350

seq1  TCTCATTCAATATTATAACTCTTGCTGGTTAAAAATATTCCCCAAAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTCAATATTATAACTCTTGCTGGTTAAAAATATTCCCCAAAAGAA  400

seq1  TGCACAATATGTCTCTCATAGTGTGGGGAGGGTATTTAGAGAAACATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAATATGTCTCTCATAGTGTGGGGAGGGTATTTAGAGAAACATTTC  450

seq1  CACACAATTCAGCCCCATCTGTTCATTCTAAAATTAAACGCTGTGGGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAATTCAGCCCCATCTGTTCATTCTAAAATTAAACGCTGTGGGTTA  500

seq1  ATAATCTGTATTTTCAGAAAAAACAAAAAAACAAAAAAACAAGGTGAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTGTATTTTCAGAAAAAACAAAAAAACAAAAAAACAAGGTGAACA  550

seq1  AGTGTGAATACTATTATAAGACTTTTGGGTTTTAGCTTAATTGAAGAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGAATACTATTATAAGACTTTTGGGTTTTAGCTTAATTGAAGAAAT  600

seq1  GTCTTAGTACTG-TTGACATGAAAATGGAGAGCTCACATAATGAAGAAAT  649
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTCTTAGTACTGTTTGACATGAAAATGGAGAGCTCACATAATGAAGAAAT  650

seq1  AAATATTTGATGTTAGAGAATTTAAATCAAACTTAACATGAAAACTTG-T  698
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AAATATTTGATGTTAGAGAATTTAAATCAAACTTAACATGAAAACTTGTT  700

seq1  TTACAAGTTTTACATTAAATTACATA-TTGAGTAAAATAATAATTTCTTT  747
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTACAAGTTTTACATTAAATTACATATTTGAGTAAAATAATAATTTCTTT  750

seq1  ATACTATGGGAGACTGCTTATTTTGTAGTTTGTTATAGGACTCCATTGTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTATGGGAGACTGCTTATTTTGTAGTTTGTTATAGGACTCCATTGTT  800

seq1  TATAGTTTTCTTTATTTATTTATTTATTTATTTATTTATTATTCATTTTT  847
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TATAGTTTTCTTTATTTATTTA-TTATTTATTTATTTATTATTCATTTTT  849

seq1  TGTCCTCATCACAGCCCCTCCCCTTCTCCCAGTATCCCCTTTACATGTCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCATCACAGCCCCTCCCCTTCTCCCAGTATCCCCTTTACATGTCA  899

seq1  TCTCCACCATTCTCCCTCTCCTTCATCTAGGAGAA-GGGAGAGGTCCC-T  945
      ||||||||||||||||||||||||||||||||||| || ||||||||| |
seq2  TCTCCACCATTCTCCCTCTCCTTCATCTAGGAGAATGGTAGAGGTCCCTT  949

seq1  CCTGGGTATCATCCCATCAGGGTACC-TTCAAGTCA-CTGCCCAACTAG-  992
      | ||||||||||||||||| |||||| || ||| || |||| ||||||| 
seq2  CTTGGGTATCATCCCATCAAGGTACCTTTTAAGGCACCTGCTCAACTAGA  999

seq1  ATATATTCTTTTCCCTTGAGACCAGATAAATCAACACACTTAAGACAAA  1041
      |||||||||||||| | |||| ||||| |||||||||||| |  |||||
seq2  ATATATTCTTTTCCTTGGAGATCAGATTAATCAACACACTAAGAACAAA  1048