BAC Information

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BAC

Clone NameB6Ng01-090C02
Chromosome1 (Build37)
Map Location 84,981,222 - 84,981,989
singlet/doubletsinglet
Overlap genenone
Upstream gene5033414K04Rik, LOC100039638, Dner, Trip12, Fbxo36, Slc16a14
Downstream geneLOC100039695, EG665317, LOC100039723, A530032D15Rik, LOC100039742, LOC100040158, LOC621835, EG665378, C130026I21Rik, LOC100040135, LOC639868
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-090C02.bB6Ng01-090C02.g
ACCDH902514DH902515
length1,188768
definitionDH902514|Mus musculus domesticus DNA, BAC clone: B6Ng01-090C02, 5' end.DH902515|Mus musculus domesticus DNA, BAC clone: B6Ng01-090C02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagcaccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcagaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccgcac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggattgattcgc
attcttctacacaataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggtttatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctgtcatggtgattctgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaatttcgttgaagaattgagttggaattt
ttgatggggattgcatttgatctgtagattgctttttggcaagatagcca
tttttacaatgttgatccctgccaatccatgagcatgggagatctttcca
tcttctgaagatctttccttaatttcttttcttcagagatttgagtttta
atcatacagatctttcacttccttagttagagtcacgccagataatttta
tattatttgtgactattgagaaggtgttgttcctaatttctttctcaagc
tgttatttttgtaaagagaaaggccatgacttggttgagttaatttatat
caagctacttcaccgaagcggttatcaggttaagggagtctctggcagaa
tttaggggcaacttaatataccaatcaactatcgtgcaaagggaattgac
cttctctttcagtgtatacctgaacctcctttagtgct
gaattcttcacccattagaccctcgatgcacctacggagtggtcagatga
taggttggtggggaccatcaccatcacagtgccaggtgttctctttaaag
ggcatagatgagggagccatgtgctttctcagactggtatctttggtttg
gtttttctgatatgattttaatttgcttataggaatctacatacagtccc
agttcactctaacaagtttatagagaggaccttctctatacccagaagta
agtaatttatcatctgtgttgtgtagtcagggttaagcagatggtgctgt
tcatacttccagccaggcacagagtcatcttacatctgcaaacagaatct
aaagcttcttgtaaaaagaagtctctcagcccggcagtggaggtgaacac
ctttaatcccagcacaggtgggtctctgagttcgaggccagcctggtcta
cagagcaagttccaggacaactaaggccacataaagaaaccctgtcttaa
aaaatccaaacaaaccaaaacccaaaacctacctctcaccctccagaagg
caagacacaacctgaaaacaacaacaacaaccatgacaacagaaacccct
aacaacattatgaacaaaccagtacccgggagcacttgactctatctgca
tatgtatcaaaaggtggcctagtcggccatcaatggaaagagcggcccat
tggacttgcaaactttatatgcaggggaatgccagggccaaaaattggga
gtgggtgggtaggggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_84981222_84981989
seq2: B6Ng01-090C02.g_69_836

seq1  GAATTCTTCACCCATTAGACCCTCGATGCACCTACGGAGTGGTCAGATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCACCCATTAGACCCTCGATGCACCTACGGAGTGGTCAGATGA  50

seq1  TAGGTTGGTGGGGACCATCACCATCACAGTGCCAGGTGTTCTCTTTAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTGGTGGGGACCATCACCATCACAGTGCCAGGTGTTCTCTTTAAAG  100

seq1  GGCATAGATGAGGGAGCCATGTGCTTTCTCAGACTGGTATCTTTGGTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAGATGAGGGAGCCATGTGCTTTCTCAGACTGGTATCTTTGGTTTG  150

seq1  GTTTTTCTGATATGATTTTAATTTGCTTATAGGAATCTACATACAGTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCTGATATGATTTTAATTTGCTTATAGGAATCTACATACAGTCCC  200

seq1  AGTTCACTCTAACAAGTTTATAGAGAGGACCTTCTCTATACCCAGAAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCACTCTAACAAGTTTATAGAGAGGACCTTCTCTATACCCAGAAGTA  250

seq1  AGTAATTTATCATCTGTGTTGTGTAGTCAGGGTTAAGCAGATGGTGCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTTATCATCTGTGTTGTGTAGTCAGGGTTAAGCAGATGGTGCTGT  300

seq1  TCATACTTCCAGCCAGGCACAGAGTCATCTTACATCTGCAAACAGAATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACTTCCAGCCAGGCACAGAGTCATCTTACATCTGCAAACAGAATCT  350

seq1  AAAGCTTCTTGTAAAAAGAAGTCTCTCAGCCCGGCAGTGGAGGTGAACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTCTTGTAAAAAGAAGTCTCTCAGCCCGGCAGTGGAGGTGAACAC  400

seq1  CTTTAATCCCAGCACAGGTGGGTCTCTGAGTTCGAGGCCAGCCTGGTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATCCCAGCACAGGTGGGTCTCTGAGTTCGAGGCCAGCCTGGTCTA  450

seq1  CAGAGCAAGTTCCAGGACAACTAAGGCCACATAAAGAAACCCTGTCTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCAAGTTCCAGGACAACTAAGGCCACATAAAGAAACCCTGTCTTAA  500

seq1  AAAATCCAAACAAACCAAAACCCAAAACCTACCTCTCACCCTCCAGAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCAAACAAACCAAAACCCAAAACCTACCTCTCACCCTCCAGAAGG  550

seq1  CAAGACACAACCTGAAAACAACAACAACAACCATGACAACAGAAACCCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACACAACCTGAAAACAACAACAACAACCATGACAACAGAAACCCCT  600

seq1  AACAACATTATGAACAAACCAGTACCCGGGAGCACTTGACTCTATCTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACATTATGAACAAACCAGTACCCGGGAGCACTTGACTCTATCTGCA  650

seq1  TATGTATCAAAAGGTGGCCTAGTCGGCCATCAATGGAAAGAGCGGCCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATCAAAAGGTGGCCTAGTCGGCCATCAATGGAAAGAGCGGCCCAT  700

seq1  TGGACTTGCAAACTTTATATGCAGGGGAATGCCAGGGCCAAAAATTGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTTGCAAACTTTATATGCAGGGGAATGCCAGGGCCAAAAATTGGGA  750

seq1  GTGGGTGGGTAGGGGAGT  768
      ||||||||||||||||||
seq2  GTGGGTGGGTAGGGGAGT  768