BAC Information

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BAC

Clone NameB6Ng01-091B09
Chromosome1 (Build37)
Map Location 132,333,422 - 132,334,576
singlet/doubletsinglet
Overlap genenone
Upstream geneThsd7b, LOC100042745, LOC100042740, Daf2
Downstream geneCd55, Zp3r, C4bp, C4bp-ps1, Pfkfb2, Yod1, AA986860, Fcamr, Pigr, Faim3, Il24, Il20, Il19, Il10, Mapkapk2, Dyrk3, Lgtn, Rassf5, Ikbke, Srgap2, LOC100042826
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091B09.bB6Ng01-091B09.g
ACCDH903215DH903216
length1,1511,217
definitionDH903215|Mus musculus domesticus DNA, BAC clone: B6Ng01-091B09, 5' end.DH903216|Mus musculus domesticus DNA, BAC clone: B6Ng01-091B09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagcctagggtaggttcaaggactctctagggcatgggtgaag
gccaggaaccaaggttcaattttgcttaggtatttggcaagccattgctt
ggaggcacccatcataaaacaatactgaaagcaagcacaaagatacattc
gcaagcacaagtttggagcattcattatatgggatgccatggttccagga
tactaagttttatgaactttttgcctcaggactgtgtgcaggtttctagt
cctgtcatgcaagtcactactgaagtgggtatagcactcctggattctgc
atttctgattctttcaagatctctcatgctcacttatttttcctacttcc
attttggagccagctatttcagaaccctaatttcattcactgaagctaaa
ggcatttggaaataagaatcttaaggtcctcatttaactggagttttcaa
ggcagatcatacacatacataactgtggtgtttgtgtgtaattattaatt
ccatatgccaacttgtactcagaaagggtttcccagaaggctggtaaaac
attatctctgggtgagccttgggatctctctagaccataagcatttgaat
caggaggataaataaagatcaacctcacaatgtgggcagctgccatctaa
ttcatagagcacacacccaaacaggttgaaaaggtggagactggattctt
gctctcttcttactttgagacattcttcctcttctttccttgaaagtcag
accttctgtttgaacttaaaatggtccaaagagttttgactataattagg
ctatcaatcattacaataacagcaacaaatccttgagggggaaaaattag
gtaacacagttaaaagaaatatgagcaactttatgcatactgttcattca
caatggtgatacatagtaacccctaagtcaacttaaagagaatggattgc
attatttatggtgtcctcgtgccatgagttcagcaagaccatgtgttatc
cagcttttcactgtttcatttatttttaagacccatgatgctcaataaaa
tcgaggtttcagaaaggtgtgatgtgcttcaacatagtcatgtccaatct
aatggtcatggaattcaaatatggccggaagccgaacctaattttgaatg
c
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctttcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgcattggccaggaaggtggccagttgtctggagt
cgaagatgtcgccgcctgagaagctctgtggctcttgtccggaaggaggc
cggccgtctggagctgaggatggtgctgcctcagaagctctgtggctctc
accaggaaggtggccggctgtctggagctgaagatggcgccgcccagaac
ctctgagactctcgcccgtcccagaaacggctggcactctgtattccaca
cggtcacccgtgcagcctgccctccgcggagtcccggagccaagaaggct
cccgccggcgcctgtgccacaaacctctcagccgggcagacccccgtgct
ctcaccaggaaggtggccggctgtctggagctgaagatggcgccgcccag
aagctctgcgactctcgcccgtcctagaaacggctggcactccgtattcc
acatggtcacccgtgcagcctgccctccgcggagtcccggagccaagaag
gctcccgcagcgcctgtgccacaaacctctcaggccgggcagaccccgtg
ctctcaccaggagtggccggctgtctggagctgaagatgcgccgccagag
ctctgcgactctcgcccgtcccagaaacggctgcactctgtagtccactg
gtcacccagtgcagctgcctccgcgggtccgagcagaaggcttccgcggc
ctggccaaccttcaggccggcagactcgtgcctcccatgaggtggccgct
atggacgaatgtctcgaaggtggatctgccgtccgaacgtgtgcacttgt
tattcactacgatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_132333422_132334576
seq2: B6Ng01-091B09.b_48_1198

seq1  GAATTCCAAGCCTAGGGTAGGTTCAAGGACTCTCTAGGGCATGGGTGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGCCTAGGGTAGGTTCAAGGACTCTCTAGGGCATGGGTGAAG  50

seq1  GCCAGGAACCAAGGTTCAATTTTGCTTAGGTATTTGGCAAGCCATTGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGAACCAAGGTTCAATTTTGCTTAGGTATTTGGCAAGCCATTGCTT  100

seq1  GGAGGCACCCATCATAAAACAATACTGAAAGCAAGCACAAAGATACATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCACCCATCATAAAACAATACTGAAAGCAAGCACAAAGATACATTC  150

seq1  GCAAGCACAAGTTTGGAGCATTCATTATATGGGATGCCATGGTTCCAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCACAAGTTTGGAGCATTCATTATATGGGATGCCATGGTTCCAGGA  200

seq1  TACTAAGTTTTATGAACTTTTTGCCTCAGGACTGTGTGCAGGTTTCTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAGTTTTATGAACTTTTTGCCTCAGGACTGTGTGCAGGTTTCTAGT  250

seq1  CCTGTCATGCAAGTCACTACTGAAGTGGGTATAGCACTCCTGGATTCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCATGCAAGTCACTACTGAAGTGGGTATAGCACTCCTGGATTCTGC  300

seq1  ATTTCTGATTCTTTCAAGATCTCTCATGCTCACTTATTTTTCCTACTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGATTCTTTCAAGATCTCTCATGCTCACTTATTTTTCCTACTTCC  350

seq1  ATTTTGGAGCCAGCTATTTCAGAACCCTAATTTCATTCACTGAAGCTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGAGCCAGCTATTTCAGAACCCTAATTTCATTCACTGAAGCTAAA  400

seq1  GGCATTTGGAAATAAGAATCTTAAGGTCCTCATTTAACTGGAGTTTTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTGGAAATAAGAATCTTAAGGTCCTCATTTAACTGGAGTTTTCAA  450

seq1  GGCAGATCATACACATACATAACTGTGGTGTTTGTGTGTAATTATTAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGATCATACACATACATAACTGTGGTGTTTGTGTGTAATTATTAATT  500

seq1  CCATATGCCAACTTGTACTCAGAAAGGGTTTCCCAGAAGGCTGGTAAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATGCCAACTTGTACTCAGAAAGGGTTTCCCAGAAGGCTGGTAAAAC  550

seq1  ATTATCTCTGGGTGAGCCTTGGGATCTCTCTAGACCATAAGCATTTGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTCTGGGTGAGCCTTGGGATCTCTCTAGACCATAAGCATTTGAAT  600

seq1  CAGGAGGATAAATAAAGATCAACCTCACAATGTGGGCAGCTGCCATCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGATAAATAAAGATCAACCTCACAATGTGGGCAGCTGCCATCTAA  650

seq1  TTCATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGAGCACACACCCAAACAGGTTGAAAAGGTGGAGACTGGATTCTT  700

seq1  GCTCTCTTCTTACTTTGAGACATTCTTCCTCTTCTTTCCTTGAAAGTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTTCTTACTTTGAGACATTCTTCCTCTTCTTTCCTTGAAAGTCAG  750

seq1  ACCTTCTGTTTGAACTTAAAATGGTCCAAAGAGTTTTGACTATAATTAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTGTTTGAACTTAAAATGGTCCAAAGAGTTTTGACTATAATTAGG  800

seq1  CTATCAATCATTACAATAACAGCAACAAATCCTTGAGGGGGAAAAATTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAATCATTACAATAACAGCAACAAATCCTTGAGGGGGAAAAATTAG  850

seq1  GTAACACAGTTAAAAGAAATATGAGCAACTTTATGCATACTGTTCATTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACACAGTTAAAAGAAATATGAGCAACTTTATGCATACTGTTCATTCA  900

seq1  CAATGGTGATACATAGTAACCCCTAAGTCAACTTAAAGAGAATGGATTGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGTGATACATAGTAACCCCTAAGTCAACTTAAAGAGAATGGATTGC  950

seq1  ATTATTTATGGTGTCCTCGTGCCATGAGTTCAGCAAGACCATGTTGTTAT  1000
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATTATTTATGGTGTCCTCGTGCCATGAGTTCAGCAAGACCATG-TGTTAT  999

seq1  CCAGCTTTTCACTGTTTTCATTTATCTTTAAAGACCCATGATGCTCAATA  1050
      |||||||||||||| |||||||||| ||| ||||||||||||||||||||
seq2  CCAGCTTTTCACTG-TTTCATTTAT-TTTTAAGACCCATGATGCTCAATA  1047

seq1  AAATCGA-GTTTCAGAAA-GTGTGATGTGCTTCAACATAGTCATGTTCTA  1098
      ||||||| |||||||||| ||||||||||||||||||||||||||| | |
seq2  AAATCGAGGTTTCAGAAAGGTGTGATGTGCTTCAACATAGTCATGTCCAA  1097

seq1  TTTTTATTTGTTCATGGATATTCAAATATGG-CTGAAGCCAGACCTAATT  1147
      | |     || ||||||| |||||||||||| | ||||||  ||||||||
seq2  TCT---AATGGTCATGGA-ATTCAAATATGGCCGGAAGCCGAACCTAATT  1143

seq1  TTGAATGC  1155
      ||||||||
seq2  TTGAATGC  1151