BAC Information

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BAC

Clone NameB6Ng01-091E14
Chromosome1 (Build37)
Map Location 68,986,519 - 69,116,934
singlet/doubletdoublet
Overlap geneErbb4
Upstream genenone
Downstream geneLOC667842, EG241084, Ikzf2, Spag16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091E14.bB6Ng01-091E14.g
ACCDH903351DH903352
length1,250783
definitionDH903351|Mus musculus domesticus DNA, BAC clone: B6Ng01-091E14, 5' end.DH903352|Mus musculus domesticus DNA, BAC clone: B6Ng01-091E14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,986,519 - 68,987,804)(69,116,156 - 69,116,934)
sequence
gaattctaccaagaaatcataggtatctgacttttataactacaaagtct
tagagtaatggttttcacctttctttgtgttacaaacctttaatacagtt
gttcatgctgtggtgacccccaaccataaaattattccattgttacttca
taactgtaactgtgctacctttaggaatcactatttaaatatctgatata
ttatccctatgaaagggttatttgacccatcaaaggggttctatcccaca
ggttgaatacaattgatctagagtatgaatctctagttctatcacatcaa
tttaagtatatacattgcagaagcattgggtaggattagtattatataca
atcattatataattttaatcatttaaatctagtgtagtccagataaattg
taagtagggaatttgattcaccaaagagcacagataattctctagcaatt
taagtttaattctgtgcattagttttttatacttatattatattctatag
tcatatcaatatctaaaatggttcccacaccatatcgcactataaatgta
gaaggataatcttaatcttcattcacataacttattctaaataggaatag
ttctggacagagtcctgatggaattttatagacaatggcaatgagtttac
aagacaacattatacacaatcaggtcctaatctctaggggggtagagcat
tctctggttgatttataccttgaacactaggtcacagcatctgggatctc
tatccattaggtgccagtacaactccctcccagctgtcaacagcaaaaaa
tacctccaaacattgacaaatgtctactggtgaagaacatacctcgtcca
tggtaagaagcataatctaaaagtaacaaaatgatattaatactccactg
agaaaataaaataaccagggagctaaacttgataacctagtacatgctag
acagcatgtgcatgatgacccagtacatgctaaacatcatgaaacccttg
gaaacatgactatcagtgtgatgtacaaattagagagactttaaagtgta
cataattcctactgaaattacactatgacatgtcaagaaatttggtctat
gtctttctgatctaatggaagtttagctttaaagaaatatttcacacagt
taatcaggcatcctcaaggttgtttcacttcaggaaagacttaggatcac
ttgtaacattgtccttatgtgaagtaagggaaatactatgccggtatgaa

gaattcttttatgtatttgaacattaagcatgagtttaaaatgcccaaca
ggatagttttgaactagactttcctgcttttgtagacaaaaacatttttc
agaggaaaaaagaagtaatgttcaaattccttgttctaatgtgttttata
cttcacaggttgtcctcatgttcatagacatctttaatcaggtggccttt
gtcaactgtaacatagctgagactctgtgagactctgtgagctgcagtac
atcacaggcaacatctagttttgtctccagatttcactcaagctccttct
ctgtctcctgtatcccttttaatagttctagttgtttccatctattccac
ggatcactttcacttcaacaaatctaagccatccttggatcccctcagtt
tcttacatcccagcttctgcctgggggatccacactgtcgatatgctttc
agaaactattggttctaactatgtattttctgctgttttcccacgttttt
cttgttagtaagttttggaagattttgcgatgtggaaatgtgatgtccct
tatagtcaggtaccatgttggtggcgttttggggaggataggtggaggaa
agatgtcactaggggtagcctttgatgtttctttttttttatttttttta
ttagatatttttcttttatatacatttcaaaatttcaaaatgttatccca
aaagttccctataacctcccccgaccctgctcccctacccacccattccc
acttcttggccctggcatttccctgtactgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_68986519_68987804
seq2: B6Ng01-091E14.b_44_1293

seq1  GAATTCTACCAAGAAATCATAGGTATCTGACTTTTATAACTACAAAGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACCAAGAAATCATAGGTATCTGACTTTTATAACTACAAAGTCT  50

seq1  TAGAGTAATGGTTTTCACCTTTCTTTGTGTTACAAACCTTTAATACAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTAATGGTTTTCACCTTTCTTTGTGTTACAAACCTTTAATACAGTT  100

seq1  GTTCATGCTGTGGTGACCCCCAACCATAAAATTATTCCATTGTTACTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATGCTGTGGTGACCCCCAACCATAAAATTATTCCATTGTTACTTCA  150

seq1  TAACTGTAACTGTGCTACCTTTAGGAATCACTATTTAAATATCTGATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGTAACTGTGCTACCTTTAGGAATCACTATTTAAATATCTGATATA  200

seq1  TTATCCCTATGAAAGGGTTATTTGACCCATCAAAGGGGTTCTATCCCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCCTATGAAAGGGTTATTTGACCCATCAAAGGGGTTCTATCCCACA  250

seq1  GGTTGAATACAATTGATCTAGAGTATGAATCTCTAGTTCTATCACATCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAATACAATTGATCTAGAGTATGAATCTCTAGTTCTATCACATCAA  300

seq1  TTTAAGTATATACATTGCAGAAGCATTGGGTAGGATTAGTATTATATACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTATATACATTGCAGAAGCATTGGGTAGGATTAGTATTATATACA  350

seq1  ATCATTATATAATTTTAATCATTTAAATCTAGTGTAGTCCAGATAAATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTATATAATTTTAATCATTTAAATCTAGTGTAGTCCAGATAAATTG  400

seq1  TAAGTAGGGAATTTGATTCACCAAAGAGCACAGATAATTCTCTAGCAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAGGGAATTTGATTCACCAAAGAGCACAGATAATTCTCTAGCAATT  450

seq1  TAAGTTTAATTCTGTGCATTAGTTTTTTATACTTATATTATATTCTATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTAATTCTGTGCATTAGTTTTTTATACTTATATTATATTCTATAG  500

seq1  TCATATCAATATCTAAAATGGTTCCCACACCATATCGCACTATAAATGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATCAATATCTAAAATGGTTCCCACACCATATCGCACTATAAATGTA  550

seq1  GAAGGATAATCTTAATCTTCATTCACATAACTTATTCTAAATAGGAATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGATAATCTTAATCTTCATTCACATAACTTATTCTAAATAGGAATAG  600

seq1  TTCTGGACAGAGTCCTGATGGAATTTTATAGACAATGGCAATGAGTTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGACAGAGTCCTGATGGAATTTTATAGACAATGGCAATGAGTTTAC  650

seq1  AAGACAACATTATACACAATCAGGTCCTAATCTCTAGGGGGGTAGAGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAACATTATACACAATCAGGTCCTAATCTCTAGGGGGGTAGAGCAT  700

seq1  TCTCTGGTTGATTTATACCTTGAACACTAGGTCACAGCATCTGGGATCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGTTGATTTATACCTTGAACACTAGGTCACAGCATCTGGGATCTC  750

seq1  TATCCATTAGGTGCCAGTACAACTCCCTCCCAGCTGTCAACAGCAAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCATTAGGTGCCAGTACAACTCCCTCCCAGCTGTCAACAGCAAAAAA  800

seq1  TACCTCCAAACATTGACAAATGTCTACTGGTGAAGAACATACCTCGTCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCAAACATTGACAAATGTCTACTGGTGAAGAACATACCTCGTCCA  850

seq1  TGGTAAGAAGCATAATCTAAAAGTAACAAAATGATATTAATACTCCACTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAGAAGCATAATCTAAAAGTAACAAAATGATATTAATACTCCACTG  900

seq1  AGAAAAATAAAAATAACCAGGGAGCTAAACTTGATAACCTAGTACATGCT  950
      ||||||   |||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAA--TAAAATAACCAGGGAGCTAAACTTGATAACCTAGTACATGCT  948

seq1  AGACAGCATGTGCATGATGACCCAGTACATGCTAAACATCATTGAAACCC  1000
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGACAGCATGTGCATGATGACCCAGTACATGCTAAACATCA-TGAAACCC  997

seq1  TTGGAAACATGAACTATCAGTGTTGTATGTACAAATTAGGAGAGACTTTA  1050
      ||||||||||| |||||||||||   |||||||||||| |||||||||||
seq2  TTGGAAACATG-ACTATCAGTGT--GATGTACAAATTA-GAGAGACTTTA  1043

seq1  GAGTGTACATAAATTCCCTACTGAAATTTTACAACTATGACATTGTCAAG  1100
       |||||||||||  | ||||||||||  |||| ||||||||| |||||||
seq2  AAGTGTACATAA--TTCCTACTGAAA--TTAC-ACTATGACA-TGTCAAG  1087

seq1  ATATTTGGTCTATGTCTTTCTGATTCTAAATTGAGAGTTTTAGCTTATAA  1150
      | ||||||||||||||||||||| |||||  || ||  |||||||| |||
seq2  AAATTTGGTCTATGTCTTTCTGA-TCTAA--TG-GAAGTTTAGCTT-TAA  1132

seq1  AAGAATATTTCAC-CATTTAATCAGGCAATCCCCTCAACAATGTTGTTTC  1199
      |  |||||||||| || |||||||||||      ||  ||| ||||||||
seq2  AGAAATATTTCACACAGTTAATCAGGCA------TCCTCAAGGTTGTTTC  1176

seq1  ACATCAGGAAAGGACTTTAGGAATTCAAAATCTTGTACCTATTG-CCTTA  1248
      || |||||||| ||| ||||||  |||    |||||| | |||| |||||
seq2  ACTTCAGGAAA-GAC-TTAGGA--TCA----CTTGTAAC-ATTGTCCTTA  1217

seq1  TGTGACAGTAAAAAGGAAAATATACTATG-CGTTATGAA  1286
      ||||| |||   |||| ||  |||||||| || ||||||
seq2  TGTGA-AGT---AAGGGAA--ATACTATGCCGGTATGAA  1250

seq1: chr1_69116156_69116934
seq2: B6Ng01-091E14.g_67_849 (reverse)

seq1  CCCCAGTACAGGGAAATGCCAGGGCCAAGAAGTGGGAATGGGTGGGTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGTACAGGGAAATGCCAGGGCCAAGAAGTGGGAATGGGTGGGTAGG  50

seq1  GGAGCAGGGTCGGGGGAGGGTATAGGGAACTTTTGGGATAACA-TTTGAA  99
      ||||||||||||||||||| ||||||||||||||||||||||| ||||||
seq2  GGAGCAGGGTCGGGGGAGGTTATAGGGAACTTTTGGGATAACATTTTGAA  100

seq1  A-TTTGAAATGTATATAAA--GAAAATATCTAATAAAAAAAATAAAAAAA  146
      | |||||||||||||||||   ||||||||||||||||||||||||||||
seq2  ATTTTGAAATGTATATAAAAGAAAAATATCTAATAAAAAAAATAAAAAAA  150

seq1  AAGAAACATCAAAGGCTACCCCTAGTGACATCTTTCCTCCACCTATCCTC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACATCAAAGGCTACCCCTAGTGACATCTTTCCTCCACCTATCCTC  200

seq1  CCCAAAACGCCACCAACATGGTACCTGACTATAAGGGACATCACATTTCC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAACGCCACCAACATGGTACCTGACTATAAGGGACATCACATTTCC  250

seq1  ACATCGCAAAATCTTCCAAAACTTACTAACAAGAAAAACGTGGGAAAACA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCGCAAAATCTTCCAAAACTTACTAACAAGAAAAACGTGGGAAAACA  300

seq1  GCAGAAAATACATAGTTAGAACCAATAGTTTCTGAAAGCATATCGACAGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAATACATAGTTAGAACCAATAGTTTCTGAAAGCATATCGACAGT  350

seq1  GTGGATCCCCCAGGCAGAAGCTGGGATGTAAGAAACTGAGGGGATCCAAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATCCCCCAGGCAGAAGCTGGGATGTAAGAAACTGAGGGGATCCAAG  400

seq1  GATGGCTTAGATTTGTTGAAGTGAAAGTGATCCGTGGAATAGATGGAAAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTTAGATTTGTTGAAGTGAAAGTGATCCGTGGAATAGATGGAAAC  450

seq1  AACTAGAACTATTAAAAGGGATACAGGAGACAGAGAAGGAGCTTGAGTGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGAACTATTAAAAGGGATACAGGAGACAGAGAAGGAGCTTGAGTGA  500

seq1  AATCTGGAGACAAAACTAGATGTTGCCTGTGATGTACTGCAGCTCACAGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGGAGACAAAACTAGATGTTGCCTGTGATGTACTGCAGCTCACAGA  550

seq1  GTCTCACAGAGTCTCAGCTATGTTACAGTTGACAAAGGCCACCTGATTAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCACAGAGTCTCAGCTATGTTACAGTTGACAAAGGCCACCTGATTAA  600

seq1  AGATGTCTATGAACATGAGGACAACCTGTGAAGTATAAAACACATTAGAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTCTATGAACATGAGGACAACCTGTGAAGTATAAAACACATTAGAA  650

seq1  CAAGGAATTTGAACATTACTTCTTTTTTCCTCTGAAAAATGTTTTTGTCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAATTTGAACATTACTTCTTTTTTCCTCTGAAAAATGTTTTTGTCT  700

seq1  ACAAAAGCAGGAAAGTCTAGTTCAAAACTATCCTGTTGGGCATTTTAAAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGCAGGAAAGTCTAGTTCAAAACTATCCTGTTGGGCATTTTAAAC  750

seq1  TCATGCTTAATGTTCAAATACATAAAAGAATTC  779
      |||||||||||||||||||||||||||||||||
seq2  TCATGCTTAATGTTCAAATACATAAAAGAATTC  783