BAC Information

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BAC

Clone NameB6Ng01-092D14
Chromosome1 (Build37)
Map Location 103,696,143 - 103,697,250
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041909, LOC100040993, LOC383650
Downstream geneLOC100041056, LOC100041067
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092D14.bB6Ng01-092D14.g
ACCDH904044DH904045
length1,2911,092
definitionDH904044|Mus musculus domesticus DNA, BAC clone: B6Ng01-092D14, 5' end.DH904045|Mus musculus domesticus DNA, BAC clone: B6Ng01-092D14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctctgaggaaacagactgggaggaagaagcagcccattacca
gccagctaattggtcaagaaaaaagccaaaagcggctggcgaaagccagc
gtactgttcaacctcccggcagtcggtttcaaggtccgccctatgcggag
cccccgccctgcgtagtgcgtcagcaatgcgcagagaggcaatgcgcaga
gagatgcgcagagaggcaatgcgcagagagatgcgcagagaggcagtgcg
cagagaggcaatgcgcagagaggcagtgcgcagactcattcattcccaga
gaggaacaaaggaaaatacaacaggcatttccggtctttgaaggagccga
gggtgggcgtgtccacgctccggtagaatacttacaaattaaagaacttg
ccgagtcggtccgtaaatacggaaccaatgctaattttaccttggtgcag
ttagacaggctcgccggcatggcactaactcctgctgactggcaaacggt
tgtaaaagccgctctccctagtatgggcaaatatatggaatggagagctc
tttggcatgaaactgcacaagcgcaggcccgagcaaacgcagctgctttg
actccagagcagagagattggacttttgacttgttaacgggtcagggagc
ttattctgctgatcaaacaaactaccattggggagcttatgcccaagttt
cctccacggctattagggcctggaaggcgctctcccgagcaggtgaaacc
actggtcaattaacaaaagttgtccagggacctcagagtccttctcagat
tttgtggccagaatgacagaggcagcagagcgtatttttggagattcaga
gcaagccgcgcctctggtagaacagctaatctatgagcaagccacaaagg
agtgccgagcggccatagccccaagaaagaacaaaggcttacagactggc
tcaggtctgtcgagagcttgggggacctctcacaatgcaggcttagcggc
cgccatcctccaatctcagaaccgctccatgagcagaaatgatcagagga
cattgttttaactgttggaaagcctgggcattttagaaagattgcaaggc
ctccgataaaaaggagggacctctcactctttggctctaagtgtggccag
ggtatctatgaggcgacacaggtgtcgccctctgtgagggaataaaggca
gaattcctctctcaactgaattcatcacgctagggccaaaacgaggtcac
tgacctagttcaaggtcttaaagaatggaacgtgtgtcaga
gaattcaaaaccactccacttatgaatgcaggggccttagagacacatat
aatgctcctaaaacattgggactagagacaacatcaaatatatttaacga
ttcattttattttaaggaatgtgtgtttctttgggagggaaaagcaagga
aaagcattagcatgtaaatataggtcactgcagtatccagaataaccctt
tatatttatcagagctgaagttacagataaatgttgtattggtcagggtt
ctctagagtcacagaatttatgggcagtctctacatagtaagggaatttg
ttgacgccttacagtctgtaatccaactcccaaaaatggtcagcagcagc
tgtgaacggaaaactaaggatctagcagttactcagtcctataaggcaag
catgtaaatgggagagaataaataatccttcttcccatgtttatgtgggt
ctctgtcaggaggagtatatgtcaccatgacttcaatcccagatgacctt
gaactcagagatgtccctgtcttaatgtcagagatgtccctgtctccatg
aaaagatcctagtcagaaacttgtatttctcagatacacacacacaaaca
aacacacacacacacacacacacacacacacacacagaaagagagagaca
gagacagagacagagagtcagagacagaggcagagaaagagagagacaga
gagacagaggcatagatatatatttgtcccatccagcagggctcagttat
tcgtgggtaagaggggaacagcaaaccagaagagaaacgggcaggaaaga
agagcaagaccaagcaaagaatgtcaaggtctgtttaatgaaggctagga
gcatgatataagcacacagtgagagaaatagggaggggctgagggagaat
taacaaagaacaaagagtaggcatctggggacatgatggctgaattctaa
ctgcaggagggaggcaccctgagtctatctcaggaatgtagattcctcct
acagcccggggtgtcagctgggctcagcacataactcaggtctagagtct
tgaaatcaggagagataagaagagggtactataatcaacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_103696143_103697250
seq2: B6Ng01-092D14.g_67_1158

seq1  GAATTCAAAACCACTCCACTTATGAATGCAGGGGCCTTAGAGACACATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAACCACTCCACTTATGAATGCAGGGGCCTTAGAGACACATAT  50

seq1  AATGCTCCTAAAACATTGGGACTAGAGACAACATCAAATATATTTAACGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTCCTAAAACATTGGGACTAGAGACAACATCAAATATATTTAACGA  100

seq1  TTCATTTTATTTTAAGGAATGTGTGTTTCTTTGGGAGGGAAAAGCAAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTATTTTAAGGAATGTGTGTTTCTTTGGGAGGGAAAAGCAAGGA  150

seq1  AAAGCATTAGCATGTAAATATAGGTCACTGCAGTATCCAGAATAACCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATTAGCATGTAAATATAGGTCACTGCAGTATCCAGAATAACCCTT  200

seq1  TATATTTATCAGAGCTGAAGTTACAGATAAATGTTGTATTGGTCAGGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTATCAGAGCTGAAGTTACAGATAAATGTTGTATTGGTCAGGGTT  250

seq1  CTCTAGAGTCACAGAATTTATGGGCAGTCTCTACATAGTAAGGGAATTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGAGTCACAGAATTTATGGGCAGTCTCTACATAGTAAGGGAATTTG  300

seq1  TTGACGCCTTACAGTCTGTAATCCAACTCCCAAAAATGGTCAGCAGCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACGCCTTACAGTCTGTAATCCAACTCCCAAAAATGGTCAGCAGCAGC  350

seq1  TGTGAACGGAAAACTAAGGATCTAGCAGTTACTCAGTCCTATAAGGCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACGGAAAACTAAGGATCTAGCAGTTACTCAGTCCTATAAGGCAAG  400

seq1  CATGTAAATGGGAGAGAATAAATAATCCTTCTTCCCATGTTTATGTGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAAATGGGAGAGAATAAATAATCCTTCTTCCCATGTTTATGTGGGT  450

seq1  CTCTGTCAGGAGGAGTATATGTCACCATGACTTCAATCCCAGATGACCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCAGGAGGAGTATATGTCACCATGACTTCAATCCCAGATGACCTT  500

seq1  GAACTCAGAGATGTCCCTGTCTTAATGTCAGAGATGTCCCTGTCTCCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGAGATGTCCCTGTCTTAATGTCAGAGATGTCCCTGTCTCCATG  550

seq1  AAAAGATCCTAGTCAGAAACTTGTATTTCTCAGATACACACACACAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATCCTAGTCAGAAACTTGTATTTCTCAGATACACACACACAAACA  600

seq1  AACACACACACACACACACACACACACACACACACAGAAAGAGAGAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACACACACACACACACACACACACACACACAGAAAGAGAGAGACA  650

seq1  GAGACAGAGACAGAGAGTCAGAGACAGAGGCAGAGAAAGAGAGAGACAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAGACAGAGAGTCAGAGACAGAGGCAGAGAAAGAGAGAGACAGA  700

seq1  GAGACAGAGGCATAGATATATATTTGTCCCATCCAGCAGGGCTCAGTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAGGCATAGATATATATTTGTCCCATCCAGCAGGGCTCAGTTAT  750

seq1  TCGTGGGTAAGAGGGGAACAGCAAACCAGAAGAGAAACGGGCAGGAAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGGGTAAGAGGGGAACAGCAAACCAGAAGAGAAACGGGCAGGAAAGA  800

seq1  AGAGCAAGACCAAGCAAAGAATTGTCAAGGTCTGTTTAATGAAGGCTAGG  850
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGAGCAAGACCAAGCAAAGAA-TGTCAAGGTCTGTTTAATGAAGGCTAGG  849

seq1  AGCATGATTATAAGCACACAGTGAGAGAAAATAGGGAGGGGCTGAGGGAG  900
      ||||||| ||||||||||||||||||| ||||||||||||||||||||||
seq2  AGCATGA-TATAAGCACACAGTGAGAG-AAATAGGGAGGGGCTGAGGGAG  897

seq1  AATTAACAAAGAACAAAGAAGTAGGCATCTGGGGACATGATGGCTGAATT  950
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AATTAACAAAGAACAAAG-AGTAGGCATCTGGGGACATGATGGCTGAATT  946

seq1  CTAACTGCAGGAGGGAGGCACCCTGAGTCTTATCTCAGGAATGTAGATTC  1000
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTAACTGCAGGAGGGAGGCACCCTGAGTC-TATCTCAGGAATGTAGATTC  995

seq1  CTCCTTAACAGCCCGGGGTGTCAAGCTGGGCTCAGCACATAACTCAGGTC  1050
      |||||  ||||||||||||||| |||||||||||||||||||||||||||
seq2  CTCCT--ACAGCCCGGGGTGTC-AGCTGGGCTCAGCACATAACTCAGGTC  1042

seq1  CTTAGAAGTCTTGGAAATCAGGAAGAGATAAGGAAGAGGGGACTATAATT  1100
        ||| |||||| ||||||||| |||||||| |||||||| |||||||| 
seq2  --TAG-AGTCTT-GAAATCAGG-AGAGATAA-GAAGAGGGTACTATAAT-  1085

seq1  CAAACTTT  1108
        ||||||
seq2  -CAACTTT  1092