BAC Information

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BAC

Clone NameB6Ng01-093E19
Chromosome1 (Build37)
Map Location 72,682,307 - 72,869,128
singlet/doubletdoublet
Overlap geneAnkar, Rpl37a
Upstream geneFn1, LOC100042814, Gabarapl2-ps1_652.1, LOC383528, LOC675667, EG667931, EG433319, LOC667937, LOC100043255, Mreg, Pecr, Tmem169, Xrcc5, March4, Smarcal1
Downstream geneIgfbp2, Igfbp5, LOC672187, LOC100042860, Tnp1, 1700027A15Rik, Pinc, LOC672208, LOC100043291
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093E19.bB6Ng01-093E19.g
ACCDH904825DH904826
length423779
definitionDH904825|Mus musculus domesticus DNA, BAC clone: B6Ng01-093E19, 5' end.DH904826|Mus musculus domesticus DNA, BAC clone: B6Ng01-093E19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,868,700 - 72,869,128)(72,682,307 - 72,683,081)
sequence
tgcttattcaatgtcattgaatcagtaataagtatgaaaattataaaggc
aagagtatccatgcacatcccgagatgaccttggactcacaatcctcctg
cctcggtgtttagagtgctgagatcacaggcatgaaccactgggaatttc
tagaatttctctttctggtgagtcgaatcagtgctgatccctttcccctt
atccccagttaatagccagctttaccctgcacaaccccagatacccacac
cccaagaggaaccttatctcagtccttccctaaccaaacaacctccaagt
cctactcaagaaaagcctgcggacacaggcgtctgatgccggcaccttct
gtaaaacacaagggaaattagtgaagcagaattcacataggttttggttt
tgggggtttggtttggtttggtt
gaattctgagtgcttccgaagagcgaggcgattgattcagacaaggtttt
tactgagactcgcattggagcatgctgtggtgaacatctataactcaggg
tcctctaatggcatggaaatttgcccataaatcagacgaattgagaattt
atgagaggcacaattttctgcagtcacttagagctgatttcatgagagct
atttgtatctccctgagcttactatttagagagaattgctgggtttgatg
aaattgctgtgagcatgaaggatttcctcctatcataaagtgtctcattt
tcacatctcgctcatgcacggtctcttctcatccctgtcgcagcaggcca
gaagccatgccaggggacatagttcatttgctgagtggtgatccatatta
gactatagaaccaaggtagagttcactctgcatggcctagtctgccttaa
cacaaacccagtgttggaggatgtttctgtgcacatgtattcaactgtga
ttggagtaaggccattaatgtatcttgcttctatctggcctactcaagaa
tatctggtatagaaaacagaaaaaccagggggtgaggggtgaaaggtggg
agtggcctgagagggggtgctggagagttacccatctggaacataaagga
tatgccaaagctgagattaagatggtaggtgacaggcccacatggcagga
tgtaggccatgtcagtatggtcagcttagaatagccagagtctgcccagt
tatagcgcctaactcttatgataaataaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_72868700_72869128
seq2: B6Ng01-093E19.b_44_472 (reverse)

seq1  AACCAAACCAAACCAAACCCCCAAAACCAAAACCTATGTGAATTCTGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAACCAAACCAAACCCCCAAAACCAAAACCTATGTGAATTCTGCTT  50

seq1  CACTAATTTCCCTTGTGTTTTACAGAAGGTGCCGGCATCAGACGCCTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATTTCCCTTGTGTTTTACAGAAGGTGCCGGCATCAGACGCCTGTG  100

seq1  TCCGCAGGCTTTTCTTGAGTAGGACTTGGAGGTTGTTTGGTTAGGGAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCAGGCTTTTCTTGAGTAGGACTTGGAGGTTGTTTGGTTAGGGAAGG  150

seq1  ACTGAGATAAGGTTCCTCTTGGGGTGTGGGTATCTGGGGTTGTGCAGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGATAAGGTTCCTCTTGGGGTGTGGGTATCTGGGGTTGTGCAGGGT  200

seq1  AAAGCTGGCTATTAACTGGGGATAAGGGGAAAGGGATCAGCACTGATTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGGCTATTAACTGGGGATAAGGGGAAAGGGATCAGCACTGATTCG  250

seq1  ACTCACCAGAAAGAGAAATTCTAGAAATTCCCAGTGGTTCATGCCTGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACCAGAAAGAGAAATTCTAGAAATTCCCAGTGGTTCATGCCTGTGA  300

seq1  TCTCAGCACTCTAAACACCGAGGCAGGAGGATTGTGAGTCCAAGGTCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCACTCTAAACACCGAGGCAGGAGGATTGTGAGTCCAAGGTCATC  350

seq1  TCGGGATGTGCATGGATACTCTTGCCTTTATAATTTTCATACTTATTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGATGTGCATGGATACTCTTGCCTTTATAATTTTCATACTTATTACT  400

seq1  GATTCAATGACATTGAATAAGCAGAATTC  429
      |||||||||||||||||||||||||||||
seq2  GATTCAATGACATTGAATAAGCAGAATTC  429

seq1: chr1_72682307_72683081
seq2: B6Ng01-093E19.g_65_843

seq1  GAATTCTGAGTGCTTCCGAAGAGCGAGGCGATTGATTCAGACAAGGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGTGCTTCCGAAGAGCGAGGCGATTGATTCAGACAAGGTTTT  50

seq1  TACTGAGACTCGCATTGGAGCATGCTGTGGTGAACATCTATAACTCAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGACTCGCATTGGAGCATGCTGTGGTGAACATCTATAACTCAGGG  100

seq1  TCCTCTAATGGCATGGAAATTTGCCCATAAATCAGACGAATTGAGAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTAATGGCATGGAAATTTGCCCATAAATCAGACGAATTGAGAATTT  150

seq1  ATGAGAGGCACAATTTTCTGCAGTCACTTAGAGCTGATTTCATGAGAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGGCACAATTTTCTGCAGTCACTTAGAGCTGATTTCATGAGAGCT  200

seq1  ATTTGTATCTCCCTGAGCTTACTATTTAGAGAGAATTGCTGGGTTTGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTATCTCCCTGAGCTTACTATTTAGAGAGAATTGCTGGGTTTGATG  250

seq1  AAATTGCTGTGAGCATGAAGGATTTCCTCCTATCATAAAGTGTCTCATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCTGTGAGCATGAAGGATTTCCTCCTATCATAAAGTGTCTCATTT  300

seq1  TCACATCTCGCTCATGCACGGTCTCTTCTCATCCCTGTCGCAGCAGGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCTCGCTCATGCACGGTCTCTTCTCATCCCTGTCGCAGCAGGCCA  350

seq1  GAAGCCATGCCAGGGGACATAGTTCATTTGCTGAGTGGTGATCCATATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCATGCCAGGGGACATAGTTCATTTGCTGAGTGGTGATCCATATTA  400

seq1  GACTATAGAACCAAGGTAGAGTTCACTCTGCATGGCCTAGTCTGCCTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATAGAACCAAGGTAGAGTTCACTCTGCATGGCCTAGTCTGCCTTAA  450

seq1  CACAAACCCAGTGTTGGAGGATGTTTCTGTGCACATGTATTCAACTGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACCCAGTGTTGGAGGATGTTTCTGTGCACATGTATTCAACTGTGA  500

seq1  TTGGAGTAAGGCCATTAATGTATCTTGCTTCTATCTGGCCTACTCAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTAAGGCCATTAATGTATCTTGCTTCTATCTGGCCTACTCAAGAA  550

seq1  TATCTGGTATAGAAAACAGAAAAACCAGGGGGTGAGGGGTGAAAGGTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGTATAGAAAACAGAAAAACCAGGGGGTGAGGGGTGAAAGGTGGG  600

seq1  AGTGGCCTGAGA-GGGGTGCTGGAGAGTTACCCATCTGG-ACATAAAGGA  648
      |||||||||||| |||||||||||||||||||||||||| ||||||||||
seq2  AGTGGCCTGAGAGGGGGTGCTGGAGAGTTACCCATCTGGAACATAAAGGA  650

seq1  TATGCC-AAGCTGAGATTAAGATGGCAGGTGACAGG-CCACATGGCAGGA  696
      |||||| |||||||||||||||||| |||||||||| |||||||||||||
seq2  TATGCCAAAGCTGAGATTAAGATGGTAGGTGACAGGCCCACATGGCAGGA  700

seq1  TGTAGGCCAGGTCAGTATGGTCAGCTTAGAATAGCCAGAGTCTGCCCAGC  746
      ||||||||| ||||||||||||||||||||||||||||||||||||||| 
seq2  TGTAGGCCATGTCAGTATGGTCAGCTTAGAATAGCCAGAGTCTGCCCAGT  750

seq1  TATAGCGCCTAACGCTTATAATAAATAAA  775
      ||||||||||||| ||||| |||||||||
seq2  TATAGCGCCTAACTCTTATGATAAATAAA  779