BAC Information

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BAC

Clone NameB6Ng01-094B18
Chromosome1 (Build37)
Map Location 28,006,740 - 28,007,658
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC677427, LOC100040952, EG433281
Downstream geneEG665903, Gm597, LOC435614, EG623924
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094B18.bB6Ng01-094B18.g
ACCDH905415DH905416
length1,0711,204
definitionDH905415|Mus musculus domesticus DNA, BAC clone: B6Ng01-094B18, 5' end.DH905416|Mus musculus domesticus DNA, BAC clone: B6Ng01-094B18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacacatgtgtttgtaataaataatactgattctttgtttctcat
ttttatcccagttgaaaactgatagtacagtatcacaaccagtaaatggg
catttatacagtagacaaacagacgatttctatcaatgtactgcaatgtt
aagcatccttgtcaatggtgaaaatagcctgttctctcttttctaatata
gaagatggatagctctgagatttaaaaaggaaagatgaaagttggaatga
tttttcttatgacaatgtaagtttaattcagtgaataaatatatttctta
aagttagctatcataacattacaaactcttgatatataaaatacaattct
cttgatatatttctatttgggattcagaattagttattatagaacatata
atatcttattggcttcctgcctgtcttaatcagggtttctattcctgcac
aaacatcatgaccaagaagcaatttggggaggaaagggtttattcggctt
acatttccatactgctgttgatcaccaaaagatgcaggactggacctcaa
gcaggtcagaaagcaggacctgatgcagaggccatggagggatgttcttt
accggcttgcttcccctggcttgctcagcctgctctcttatagaacaaag
actaccagcccagagatggtcccaccaacaagaggcctttcccccttgat
cactaattgaaaaaatgcctgacagttgtatctcatggaggcatttcctc
aactgaagctcctttctctgtgataacaacagctgtgtcaagttgacaca
aaactagccaatactctgccttaaaataatgttttaaaaaccaagtatta
atttatgtatttaagaatgttaactttcacattaaatgatcaaaagagct
acagtgttacacagcagctgtaaactacaggtgaagtcaatactgatttg
actactacacatactatcatgagataaaactcagtttaattatattctat
ttataatcgtcaagactaagttgagaacacaatgacatgaacaatagttt
agttagaaatgtatcatctga
gaattcactcttgcacctgcatacaaggcttgtttactagttaggcacag
cggaggcccgtgccatcttataatggcgattgctcgcggcacacacggct
ctcctcagagattactggcggcacacatgcgattgctcgcagcacgtact
ggctttccacaatatccaatatataaacaactaaaaaggttggactcccg
aaaatcaaataaccctattaaaaatggggtacagagctaaacaaataatt
ctctactgaggaatatcaaatgtctgagaggcacctgacaaaatgttcaa
catccctagtcatcagggaaatgtaaatcaaaacaaccctgagaatctac
ctcaaaccagtcagaatggctaaaatcaaaagtttaggtgataccagatg
ctagaaaggatgtgtagaaagaggaacactcatccattgctggtgggatt
gcaagttggtacaactactctggaaatcagttttgtggttcctcatatat
ccagaagatgttccaacttgtagtaaggacacatgctcctcaatgttcat
aacatccttatttatcatagccagaagctagaaataacccagatgacctc
aaaagatgaatggatacataaaatgtggtacatttacacaatggagtact
actcagttagtaaaaacaaagaatttatgaaattcttagacaaatagatg
gatctggaggatatcattctgagtgaggtaacccaatcacaaaagaacac
acatgatatgcactcactgagaagtggctattagcccagaaacagaatac
ctgagatataatttgcaaaacacatgaaactccagaggaaggtagactaa
agtatggatactatttttccttcttagatggggaacaaaatacccatgga
aggagttacaagagacaaatttctgagcagagcctgaggaacactatcca
gagactgtccctaataggtatccatccataaacaccacaaacccagacac
tagacagatgcacagagcatgctgagaggagcgacataaatgtcattgtg
aggctccgcagtgctgacaaattacaagtcttttgcctcccagtatcaat
ggaggggcacaggtctcatggttaacgggatcatggaagtcagggcagta
agcttgagctcctagagaactctcattttaactcatcagcagttatccac
tcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_28006740_28007658
seq2: B6Ng01-094B18.b_225_1117 (reverse)

seq1  TCAGATGAATTACATTTTCTAAACTAAAACTATTGTTTCATGGTCATTTT  50
      ||||||||  |||| ||||| |||| ||||||||| ||||| ||||||  
seq2  TCAGATGA--TACA-TTTCT-AACT-AAACTATTG-TTCAT-GTCATT--  41

seq1  GTTGTTCTCAAACTTTAGTCTTTGACCGATTTATAAATAGAATTATAATT  100
        |||||||||   |||||| |||| ||| |||||||||||| |||||||
seq2  -GTGTTCTCAA--CTTAGTC-TTGA-CGA-TTATAAATAGAA-TATAATT  84

seq1  AAACCTGAGTTTTTAATCTCATGATAGTTAATGTGTAGTAGTTCAAATCA  150
      ||| |||||||||  |||||||||||||  ||||||||||| ||||||||
seq2  AAA-CTGAGTTTT--ATCTCATGATAGT--ATGTGTAGTAG-TCAAATCA  128

seq1  GTATTGACTTCACCTGTAGTTTTACAGCTGCTGTTGTAACACTGTAGCTC  200
      ||||||||||||||||||| ||||||||||||| ||||||||||||||||
seq2  GTATTGACTTCACCTGTAG-TTTACAGCTGCTG-TGTAACACTGTAGCTC  176

seq1  TTTTGATCATTTAATGTGAAAGTTAACATTCTTAAATACATAAATTTAAT  250
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTTTGATCATTTAATGTGAAAGTTAACATTCTTAAATACATAAA-TTAAT  225

seq1  ACCTTGGTTTTTAAAACATTATTTTAAGGCAGAGTATTGGCTAGTTTTGT  300
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-CTTGGTTTTTAAAACATTATTTTAAGGCAGAGTATTGGCTAGTTTTGT  274

seq1  GTCAACTTGACACAGCTGTTGTTATCACAGAGAAAGGAGCTTCAGTTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACTTGACACAGCTGTTGTTATCACAGAGAAAGGAGCTTCAGTTGAG  324

seq1  GAAATGCCTCCATGAGATACAACTGTCAGGCATTTTTTCAATTAGTGATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCCTCCATGAGATACAACTGTCAGGCATTTTTTCAATTAGTGATC  374

seq1  AAGGGGGAAAGGCCTCTTGTTGGTGGGACCATCTCTGGGCTGGTAGTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGGAAAGGCCTCTTGTTGGTGGGACCATCTCTGGGCTGGTAGTCTT  424

seq1  TGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGGGAAGCAAGCCGGTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGGGAAGCAAGCCGGTAAA  474

seq1  GAACATCCCTCCATGGCCTCTGCATCAGGTCCTGCTTTCTGACCTGCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATCCCTCCATGGCCTCTGCATCAGGTCCTGCTTTCTGACCTGCTTG  524

seq1  AGGTCCAGTCCTGCATCTTTTGGTGATCAACAGCAGTATGGAAATGTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCAGTCCTGCATCTTTTGGTGATCAACAGCAGTATGGAAATGTAAG  574

seq1  CCGAATAAACCCTTTCCTCCCCAAATTGCTTCTTGGTCATGATGTTTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAATAAACCCTTTCCTCCCCAAATTGCTTCTTGGTCATGATGTTTGTG  624

seq1  CAGGAATAGAAACCCTGATTAAGACAGGCAGGAAGCCAATAAGATATTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATAGAAACCCTGATTAAGACAGGCAGGAAGCCAATAAGATATTAT  674

seq1  ATGTTCTATAATAACTAATTCTGAATCCCAAATAGAAATATATCAAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTATAATAACTAATTCTGAATCCCAAATAGAAATATATCAAGAGA  724

seq1  ATTGTATTTTATATATCAAGAGTTTGTAATGTTATGATAGCTAACTTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATTTTATATATCAAGAGTTTGTAATGTTATGATAGCTAACTTTAA  774

seq1  GAAATATATTTATTCACTGAATTAAACTTACATTGTCATAAGAAAAATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATATTTATTCACTGAATTAAACTTACATTGTCATAAGAAAAATCA  824

seq1  TTCCAACTTTCATCTTTCCTTTTTAAATCTCAGAGCTATCCATCTTCTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAACTTTCATCTTTCCTTTTTAAATCTCAGAGCTATCCATCTTCTAT  874

seq1  ATTAGAAAAGAGAGAACAG  919
      |||||||||||||||||||
seq2  ATTAGAAAAGAGAGAACAG  893