BAC Information

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BAC

Clone NameB6Ng01-095O15
Chromosome1 (Build37)
Map Location 49,729,854 - 49,730,993
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666903, LOC666909, 2900045O20Rik, LOC666924, C230029F24Rik, LOC627430, LOC100041981
Downstream geneEG666962, EG666970, LOC100041993
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095O15.bB6Ng01-095O15.g
ACCDH906722DH906723
length1,2411,125
definitionDH906722|Mus musculus domesticus DNA, BAC clone: B6Ng01-095O15, 5' end.DH906723|Mus musculus domesticus DNA, BAC clone: B6Ng01-095O15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgagaatattggaaataattctacttaaattccaagctatatc
actctggggcatatacccaaagatgccttaccatgccacaggggcacatg
ttccactatgcttatagcagccttatttgtgatagccagaaactggtaac
aatccatatgcctcacatcagaagaatgcatacacaaaacgtgatccatt
tatacaatagaatattagtcagctattaggaacaaggacatcatgagttt
tgcaggcaaatggatggatctagaaaatatcctgtgtaagataactcaga
caaaacagtacatgcatggtatgtactcactaataagtggacattagcca
taaaagtatagaatacccaggataaaatccacagaactcaagaaaattaa
cagttctgaagggtccaagtgaggatgtctcaatcccacttggaaggaag
aagaaagcaatcatggagtcgggggaaagggaggggcatggagagggagc
gttctgggtgggaaaggggacagggaagtgaagaggaaaacatgatcaga
tatcacatcttgggatgttgtaggtggaggaaccctctaaaatatataag
agacctgggaggtgggagactctcaagattcaaagtaggaacatcagatg
aaatttcctacagtggggagaaggaacttgtagagcttgcctccagtaga
cagacagggcatcaattagagggatgaggttgccatcccacattcaaaaa
ctctgagccagaatagtacctgtctcttagaactgcagggacacaaatgt
agagaagcctgagggaaaggagttacagtgacagtcccaaattagggtcc
agcgcaaggggaggctcaaagaactgaaactattactgatggcatagtat
gcttacaaacaggaggctaacataactgcttgttgaaaggcccaaaagca
tctaaaagagcagatgcaaataattacacccaccaatggccagaatttga
tgaccctgtgctgatttgagaaagctggaaaatctgaggagaagcgcctt
tagaaagactagcagtctctacttactggatcttcagagtagctctgaac
tcttatacaccagctattagaagccctcacactttcagcaagaaatctgc
aaatcttgtactcatatggagaagagatgacctaaccttaaggctcagta
atggagaattggatctctcttcgcgactaactattgtgaag
gaattcattaaaccaagacaagcaggatggctgtggtacccagaaattca
gcaaaagtgaacatgactttgtacatttttgtgcctagttttctgttggg
gatactggcacaactattaaagtccacagaactaacaccacaaacaacat
tttcaaaaccaattgtatgaaaagaataaacctgagaggtttattttatt
ttattttattttatttttgtgttttgttttgttttttgtttgtttgtttg
ttttttgagatccatgaatttattcatctttgatcctgattacagatgtg
atctgaccaattccatgagctcttccaactgtgacttccttgctagagat
caatagccattcagaatcatgatccaaaataagccctttcaccattatat
tggtactattattttctttttccttttttttcaaaaaatttttattagat
attttctttaaaaaaacaaacaaaaacaaaaacaaaaaataaacaaacaa
ataaaaaaacaaacaaacagaggttttgatagatggagaggtaagcaaca
ttgccaaacagaggattgggttgtaatagatagaaaggtgagcatcatag
ccaaatagagattcagggttgtgattaaagttcacactaccaccaactgt
gagacaaagcaccttaatttcattatgtggcatcataagtagcaaacttg
aggataaagaagttactttggcttttttccatttcaattccatcatttat
taaagcatatggagtagcaactagctattttaagggcatgctggacaaac
cgggtagagaaaagatttgacaaaatgttttgaggctgctggatgtctac
cagcttgatcagtacagtgtagtgacatagcatcatggaatgcatgtata
cttatttgatttccatgtggaagacctataaaaactaagataaaaaaata
tgtgtcttgacctgaaatgtgacttttttgtatcaaagagttctgtacaa
acatgcaccaattaaagccttaagagtctcttcactttcagccactgaaa
gtatggctgtcaaaataacaatactgaataagaaactcaaggaaaagtaa
tgttgtcctggaattttaatgacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_49729854_49730993
seq2: B6Ng01-095O15.g_69_1193

seq1  GAATTCATTAAACCAAGACAAGCAGGATGGCTGTGGTACCCAGAAATTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAAACCAAGACAAGCAGGATGGCTGTGGTACCCAGAAATTCA  50

seq1  GCAAAAGTGAACATGACTTTGTACATTTTTGTGCCTAGTTTTCTGTTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAGTGAACATGACTTTGTACATTTTTGTGCCTAGTTTTCTGTTGGG  100

seq1  GATACTGGCACAACTATTAAAGTCCACAGAACTAACACCACAAACAACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTGGCACAACTATTAAAGTCCACAGAACTAACACCACAAACAACAT  150

seq1  TTTCAAAACCAATTGTATGAAAAGAATAAACCTGAGAGGTTTATTTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAACCAATTGTATGAAAAGAATAAACCTGAGAGGTTTATTTTATT  200

seq1  TTATTTTATTTTATTTTTGTGTTTTGTTTTGTTTTTTGTTTGTTTGTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATTTTATTTTTGTGTTTTGTTTTGTTTTTTGTTTGTTTGTTTG  250

seq1  TTTTTTGAGATCCATGAATTTATTCATCTTTGATCCTGATTACAGATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGAGATCCATGAATTTATTCATCTTTGATCCTGATTACAGATGTG  300

seq1  ATCTGACCAATTCCATGAGCTCTTCCAACTGTGACTTCCTTGCTAGAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGACCAATTCCATGAGCTCTTCCAACTGTGACTTCCTTGCTAGAGAT  350

seq1  CAATAGCCATTCAGAATCATGATCCAAAATAAGCCCTTTCACCATTATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGCCATTCAGAATCATGATCCAAAATAAGCCCTTTCACCATTATAT  400

seq1  TGGTACTATTATTTTCTTTTTCCTTTTTTTTCAAAAAATTTTTATTAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACTATTATTTTCTTTTTCCTTTTTTTTCAAAAAATTTTTATTAGAT  450

seq1  ATTTTCTTTAAAAAAACAAACAAAAACAAAAACAAAAAATAAACAAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTTAAAAAAACAAACAAAAACAAAAACAAAAAATAAACAAACAA  500

seq1  ATAAAAAAACAAACAAACAGAGGTTTTGATAGATGGAGAGGTAAGCAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAAACAAACAAACAGAGGTTTTGATAGATGGAGAGGTAAGCAACA  550

seq1  TTGCCAAACAGAGGATTGGGTTGTAATAGATAGAAAGGTGAGCATCATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAAACAGAGGATTGGGTTGTAATAGATAGAAAGGTGAGCATCATAG  600

seq1  CCAAATAGAGATTCAGGGTTGTGATTAAAGTTCACACTACCACCAACTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATAGAGATTCAGGGTTGTGATTAAAGTTCACACTACCACCAACTGT  650

seq1  GAGACAAAGCACCTTAATTTCATTATGTGGCATCATAAGTAGCAAACTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAAAGCACCTTAATTTCATTATGTGGCATCATAAGTAGCAAACTTG  700

seq1  AGGATAAAGAAGTTACTTTGGCTTTTTTCCATTTCAATTCCATCATTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAAAGAAGTTACTTTGGCTTTTTTCCATTTCAATTCCATCATTTAT  750

seq1  TAAAGCATATGGAGTAGCAACTAGCTATTTTAAGGGCATGCTGGACAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCATATGGAGTAGCAACTAGCTATTTTAAGGGCATGCTGGACAAAC  800

seq1  CGGGTAGAGAAAAGATTTGACAAAATGTTTTGAGGCTGCTGGATGTCTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTAGAGAAAAGATTTGACAAAATGTTTTGAGGCTGCTGGATGTCTAC  850

seq1  CAGCTTGATCAGTACAGTGGTAGTGACATAGCATCATGGAATGCATGTAT  900
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CAGCTTGATCAGTACAGT-GTAGTGACATAGCATCATGGAATGCATGTAT  899

seq1  ACTTATTTGATTTCCATGTTGGAAGACCTTATAAAAACTAAGATTAAAAA  950
      |||||||||||||||||| ||||||||| |||||||||||||||  ||||
seq2  ACTTATTTGATTTCCATG-TGGAAGACC-TATAAAAACTAAGAT--AAAA  945

seq1  AAATATGTGTCTTGACCTGAAAATGTGACTTTTTTGTATCAAAGAGTTCT  1000
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AAATATGTGTCTTGACCTG-AAATGTGACTTTTTTGTATCAAAGAGTTCT  994

seq1  TGTTACAAACATTGCCACCATTATAGCCTTAAGAGTCTTCTTCACTTTCA  1050
         |||||||| |||  | |||| ||||||||||||| ||||||||||||
seq2  --GTACAAACA-TGCACCAATTAAAGCCTTAAGAGTC-TCTTCACTTTCA  1040

seq1  GCCACTGAAAGTAATGGCTGGTCAAAATAACCATACTGAATAAGACACTA  1100
      |||||||||||| |||||| ||||||||||| ||||||||||||| ||| 
seq2  GCCACTGAAAGT-ATGGCT-GTCAAAATAACAATACTGAATAAGAAACTC  1088

seq1  CAAGAAAAGTAATGTTGTCCCTGGGAATTTTTAATGACAG  1140
       | ||||||||||||||| |||||  | ||||||||||||
seq2  AAGGAAAAGTAATGTTGT-CCTGG--AATTTTAATGACAG  1125