BAC Information

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BAC

Clone NameB6Ng01-101B05
Chromosome1 (Build37)
Map Location 143,072,945 - 143,074,090
singlet/doubletsinglet
Overlap genenone
Upstream geneCfh, Kcnt2
Downstream geneEG226472, LOC639376
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101B05.bB6Ng01-101B05.g
ACCDH910378DH910379
length1,140857
definitionDH910378|Mus musculus domesticus DNA, BAC clone: B6Ng01-101B05, 5' end.DH910379|Mus musculus domesticus DNA, BAC clone: B6Ng01-101B05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctattgtgattggtttccaaggtcacagaatgtaagagaatatgt
aatcaacttgaaaatgagaaagttttctagtaacaacagaaacatagaga
aaattttcttacaatggtaagctaaccagataagagttaactgagacttt
ttactaggccttaacacttaagaactataatatgttatgtatccatcaaa
aacttaatccattgttcagttcagtgttcctctgaaccaatcttctctga
aaagaacaacacagacccactttgatgtgtctcactaaattcgtaggcac
tgctcaatacaatcaattttaaaatcaagatcaattagcatgctaaactt
tcaataattgtaacagatttgattaattataatttgaaagagggagagct
tgatgtttaaacagaaaataggtttgatgttgccaatctaatctgttttt
attgatatactttgccaattggtcaaaaataataattttaaatgtttatc
taataaaaaaattttaagtaacaatgtttaaaactgtaaaattaatgttt
gagtataaattaatgtatttgtgtatgtatgtatgattgtgtgttatgct
acaaataaaattcagagttttatgcaaggcagacaagggctctagacaat
atcagattaatttttaaccaatattttaattaactactgcacatttgagt
tatggttttgtttatcctttttgcaaattttcatgtaagtggccaccttc
ctgtcagaaaatcaatttagatcaatattaagtttattattccctaatgt
aatcttatcttagctatttactttctaagatgctagctaatttgaaattt
atgtgcatgctttttaggaagttttagatgcaactgtttctacaccatga
tttagcatcatttgacattgtattagaaagtcctaccttagaaattctac
tttaatactgtaaattataagtgataaatgcagtggtgtttatatatttt
agttgtatgaaatgaacatttaaatgtgagaatttttttactgtgggtca
taatttttatattaatcaaagaacaattgctgagtttatctaatgattta
gaagttcagcaagattttaattttatttattttgggtgtg

gaattctttcaagtccttgtctttaagagcaaatctgcatctgcggtaca
ttaatccaaaacagaccatctcaagaagatcacctgctagttattagctt
gtcctattatggctcctgacaatcaccaaatatttcctttatttctgtaa
gcataatttttattctagtgactgctcctttgtgggtagcctttaatttc
tagcaatccccttagctcttgttattgttctgtgtgtactagaagagttc
tcagaaagttcttgctatgccactagtagaccaacaatttcagatctgat
catcttaaaagtgttttacactgtttgattttatttcagttcaacattag
atatatgaatctgattccattcttctacatgtagctatgtgtttttccaa
gcactattagttgaagaggctgtctttgtgccaatataagtttttgtatt
tttgtcaaggtaggccttgcctgagctttcctaaactctttctttaattt
ttcatatttcataaaacaataaatatgtgagtacatatatgtgtgtgtgc
tagtctataggtgtttagtatgtttagtatgtgtgtatacatatgtgtat
gtgtgcaaagaagtctgagtatgtataatatgaatgcatatgaatgattg
tgtttatatgtgtttgtatatatgtgtagagtgctatgatggtttgtata
tccttggactagtgaggtgtggctttgttggaataggtgacctgctggaa
tgggtgtgtcactgtgggtgtgggtataatatccccacctagttgcctgg
aagtagtcttccactacaaccttggaagaagacatagaactctcagctcc
ccctgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_143072945_143074090
seq2: B6Ng01-101B05.b_45_1184

seq1  GAATTCTATTGTGATTGGTTTCCAAGGTCACAGAATGTAAGAGAATATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTGTGATTGGTTTCCAAGGTCACAGAATGTAAGAGAATATGT  50

seq1  AATCAACTTGAAAATGAGAAAGTTTTCTAGTAACAACAGAAACATAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAACTTGAAAATGAGAAAGTTTTCTAGTAACAACAGAAACATAGAGA  100

seq1  AAATTTTCTTACAATGGTAAGCTAACCAGATAAGAGTTAACTGAGACTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTCTTACAATGGTAAGCTAACCAGATAAGAGTTAACTGAGACTTT  150

seq1  TTACTAGGCCTTAACACTTAAGAACTATAATATGTTATGTATCCATCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAGGCCTTAACACTTAAGAACTATAATATGTTATGTATCCATCAAA  200

seq1  AACTTAATCCATTGTTCAGTTCAGTGTTCCTCTGAACCAATCTTCTCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAATCCATTGTTCAGTTCAGTGTTCCTCTGAACCAATCTTCTCTGA  250

seq1  AAAGAACAACACAGACCCACTTTGATGTGTCTCACTAAATTCGTAGGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACAACACAGACCCACTTTGATGTGTCTCACTAAATTCGTAGGCAC  300

seq1  TGCTCAATACAATCAATTTTAAAATCAAGATCAATTAGCATGCTAAACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAATACAATCAATTTTAAAATCAAGATCAATTAGCATGCTAAACTT  350

seq1  TCAATAATTGTAACAGATTTGATTAATTATAATTTGAAAGAGGGAGAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAATTGTAACAGATTTGATTAATTATAATTTGAAAGAGGGAGAGCT  400

seq1  TGATGTTTAAACAGAAAATAGGTTTGATGTTGCCAATCTAATCTGTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTTAAACAGAAAATAGGTTTGATGTTGCCAATCTAATCTGTTTTT  450

seq1  ATTGATATACTTTGCCAATTGGTCAAAAATAATAATTTTAAATGTTTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATATACTTTGCCAATTGGTCAAAAATAATAATTTTAAATGTTTATC  500

seq1  TAATAAAAAAATTTTAAGTAACAATGTTTAAAACTGTAAAATTAATGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAAAAATTTTAAGTAACAATGTTTAAAACTGTAAAATTAATGTTT  550

seq1  GAGTATAAATTAATGTATTTGTGTATGTATGTATGATTGTGTGTTATGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATAAATTAATGTATTTGTGTATGTATGTATGATTGTGTGTTATGCT  600

seq1  ACAAATAAAATTCAGAGTTTTATGCAAGGCAGACAAGGGCTCTAGACAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATAAAATTCAGAGTTTTATGCAAGGCAGACAAGGGCTCTAGACAAT  650

seq1  ATCAGATTAATTTTTAACCAATATTTTAATTAACTACTGCACATTTGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGATTAATTTTTAACCAATATTTTAATTAACTACTGCACATTTGAGT  700

seq1  TATGGTTTTGTTTATCCTTTTTGCAAATTTTCATGTAAGTGGCCACCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTTTTGTTTATCCTTTTTGCAAATTTTCATGTAAGTGGCCACCTTC  750

seq1  CTGTCAGAAAATCAATTTAGATCAATATTAAGTTTATTATTCCCTAATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGAAAATCAATTTAGATCAATATTAAGTTTATTATTCCCTAATGT  800

seq1  AATCTTATCTTAGCTATTTACTTTCTAAGATGCTAGCTAATTTGAAATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTATCTTAGCTATTTACTTTCTAAGATGCTAGCTAATTTGAAATTT  850

seq1  ATGTGCATGCTTTTTAGGAAGTTTTAGATGCAACTGTTTCTACACCATGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCATGCTTTTTAGGAAGTTTTAGATGCAACTGTTTCTACACCATGA  900

seq1  TTTAGCATCATTTGACAATTGTATTAGAAAGTCCTACCTTAGAAATTCTA  950
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTTAGCATCATTTGAC-ATTGTATTAGAAAGTCCTACCTTAGAAATTCTA  949

seq1  CTTTAATACTGTAAATTACAGGTGATAAATGCAGTGGTGTTTATATATTT  1000
      |||||||||||||||||| | |||||||||||||||||||||||||||||
seq2  CTTTAATACTGTAAATTATAAGTGATAAATGCAGTGGTGTTTATATATTT  999

seq1  TAGTTGTATGAAATGAACCATTTAAATGTGAGATTTTTTTTACTGT-GGT  1049
      ||||||||||||||||| ||||||||||||||| |||||||||||| |||
seq2  TAGTTGTATGAAATGAA-CATTTAAATGTGAGAATTTTTTTACTGTGGGT  1048

seq1  CATAATTTTTATATTATTCATAGAACAATTGGCTGAGTTTATCTTATGAT  1099
      |||||||||||||||| ||| ||||||||| ||||||||||||| |||||
seq2  CATAATTTTTATATTAATCAAAGAACAATT-GCTGAGTTTATCTAATGAT  1097

seq1  TTAGAAGTTCCAGCAAGTATTTTTTATTTTATTTTATTTTGTGTGTG  1146
      ||||||||| |||||||   |||| |||||| ||||||||| |||||
seq2  TTAGAAGTT-CAGCAAG--ATTTTAATTTTA-TTTATTTTGGGTGTG  1140


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