BAC Information

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BAC

Clone NameB6Ng01-101K06
Chromosome1 (Build37)
Map Location 191,582,468 - 191,714,723
singlet/doubletdoublet
Overlap genePtpn14, LOC100042438, Smyd2
Upstream geneUsh2a, Kctd3, Kcnk2, LOC100042424, LOC100039307, Cenpf
Downstream geneProx1, LOC100039394, EG666975, Rps6kc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101K06.bB6Ng01-101K06.g
ACCDH910761DH910762
length9481,010
definitionDH910761|Mus musculus domesticus DNA, BAC clone: B6Ng01-101K06, 5' end.DH910762|Mus musculus domesticus DNA, BAC clone: B6Ng01-101K06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(191,713,764 - 191,714,723)(191,582,468 - 191,583,496)
sequence
gaattccagaacagttggtccctatttcacaggagcagccagggaaacct
ttgtgcaccctgaacagatccacaccgtcattccacgatgcagagggtgg
gagtgtttggggttctgttgaagacccctggggatgcctgctgctcctca
cgtgccattccatgtgctagtgctgggtgtttgtgtctgctgctgggctg
caggcatcagggaagtcaggagaaggggacctgagtgagcagatcttggc
ttgggcagctttctccagagagagaaaaggtagcggtgttggcccttagg
ccaaggtgaggtctcttggcagagattctcatagacttttgggaagagaa
cagagaaaaggacaggcatgggctctgcgaagacagcccaggcagccatt
gaattctgcactgtgggctgtttatgaatgtctgaggatgtctgaattag
agacctcaccatgtcccatggcagccaaaaatgacaactgtggatcctga
gctgcctgcctgtttgttttactgccatccccaccacctctgtttagaga
gacagcctagcacttttccaagaaggttctagaaacctgttattcgttgc
ttttaacctgcgcctttgggagctttgccgagcagacatcccggcacctg
atgccctaagcgtccctgtgggaacctaagtaggctgtagtatcaggtag
agacgtccccccacaagaataagaacaggagccggctacccgttcgtgcc
agtgtgaagctcatcgcccgctctgctcagctctctagcagcaggataga
ggacggtcgcttctctcgagaccaccacaatggggcagaaacttcagtgg
tcctgagacccatttgggttttttgttgtgttgttgctttgttctcgttt
gaatccgggggaagtaagagaagggtctagttcttctgggccaggcag
gaattctaagcccatttggtagttcaggagtcttcctcagacgatccatc
agtgggagaacgatccatcagtggaagaacgatccatcagtgggagaacg
atccatcagtgggagaacgatccatcagtgggagaacgatccatcagtgg
gagaacgatccatcagtgggagaacgatccatcagtgggagaacggccca
gggaagttctcatgacctacagggctcctttacaaagtaccttaaaatta
tgaccaccaagcacactgtacagagaggttgaaggctttcagcccccctc
cttaatgcccttaaataaggggtgctatgcctggactcggacaccctcag
gctaattctgcccgccggatctggagactgactgctttctgggagcatgg
agatggctagaaataagccacgggccctcaggttccctctcagaatcacc
tgaagctaaagaaagagaaggcacacaagggataatggggagatggctca
aggaggggacgcttccaagattagatgatcgtgaagatggcgctggcaac
aatgagtgagcatatccagtcatgctcttaccggctgtaaatccttggca
tgcgttacaacaaccttgtgaagtaagtgctgttactgtcagccctggct
caccggcggggaaacggaggtaggggttagttggccgaggctgttgtggt
ggatgtgggattctgatccagaagtcaggtggcacagtagagttcaggtg
aacccgcagaagatggcattcaaaggagagagagtgctggctctgtatat
ggatgtcacttagaccctggtcaactgttctaggcagaaagtaagccagc
gatgttaggtttggctttttaagaactgagaggaatcagtactttttggt
gagtaatttgatgtttaagcggtaggatccctttcaaaattggaagatta
ctttatatagttatatagagttcctacgtgatgtctgtgcacctgtgtgt
gtccgtgccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_191713764_191714723
seq2: B6Ng01-101K06.b_45_992 (reverse)

seq1  CTGCCTGGCCCATGAGAGACTAGAACCCTTCTCTTACTTACCCCAGGATT  50
      ||||||||||||  ||| ||||| ||||||||||||||| |||| |||||
seq2  CTGCCTGGCCCAGAAGA-ACTAG-ACCCTTCTCTTACTT-CCCCCGGATT  47

seq1  CAAAACAAAAAACAAAACAACAACAACAACAAAAAAACCCAAATGGGTCT  100
      ||||    | |||||| ||||||| ||||| |||||||||||||||||||
seq2  CAAA--CGAGAACAAAGCAACAAC-ACAAC-AAAAAACCCAAATGGGTCT  93

seq1  CAGGACCACTGAAGGTTTCTGCCCCATTGTGGTGTGTCTCGGAGAGAAGC  150
      ||||||||||||| |||||||||||||||||||| ||||| |||||||||
seq2  CAGGACCACTGAA-GTTTCTGCCCCATTGTGGTG-GTCTC-GAGAGAAGC  140

seq1  GACCGTCCTCTATCCTGCCTGCTAGAGAGCTGAGCAGAGCGGGCGATGAG  200
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GACCGTCCTCTATCCTG-CTGCTAGAGAGCTGAGCAGAGCGGGCGATGAG  189

seq1  CTTCACACCTGGCACGAACGGGTAGCCGGCTCCTGTTCTTATTCTTGTGG  250
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACA-CTGGCACGAACGGGTAGCCGGCTCCTGTTCTTATTCTTGTGG  238

seq1  GGGGACGTCTCTACCTGATACTACAGCCTACTTAGGTTCCCACAGGGACG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACGTCTCTACCTGATACTACAGCCTACTTAGGTTCCCACAGGGACG  288

seq1  CTTAGGGCATCAGGTGCCGGGATGTCTGCTCGGCAAAGCTCCCAAAGGCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGGCATCAGGTGCCGGGATGTCTGCTCGGCAAAGCTCCCAAAGGCG  338

seq1  CAGGTTAAAAGCAACGAATAACAGGTTTCTAGAACCTTCTTGGAAAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTAAAAGCAACGAATAACAGGTTTCTAGAACCTTCTTGGAAAAGTG  388

seq1  CTAGGCTGTCTCTCTAAACAGAGGTGGTGGGGATGGCAGTAAAACAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCTGTCTCTCTAAACAGAGGTGGTGGGGATGGCAGTAAAACAAACA  438

seq1  GGCAGGCAGCTCAGGATCCACAGTTGTCATTTTTGGCTGCCATGGGACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGCAGCTCAGGATCCACAGTTGTCATTTTTGGCTGCCATGGGACAT  488

seq1  GGTGAGGTCTCTAATTCAGACATCCTCAGACATTCATAAACAGCCCACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGGTCTCTAATTCAGACATCCTCAGACATTCATAAACAGCCCACAG  538

seq1  TGCAGAATTCAATGGCTGCCTGGGCTGTCTTCGCAGAGCCCATGCCTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAATTCAATGGCTGCCTGGGCTGTCTTCGCAGAGCCCATGCCTGTC  588

seq1  CTTTTCTCTGTTCTCTTCCCAAAAGTCTATGAGAATCTCTGCCAAGAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTCTGTTCTCTTCCCAAAAGTCTATGAGAATCTCTGCCAAGAGAC  638

seq1  CTCACCTTGGCCTAAGGGCCAACACCGCTACCTTTTCTCTCTCTGGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCTTGGCCTAAGGGCCAACACCGCTACCTTTTCTCTCTCTGGAGAA  688

seq1  AGCTGCCCAAGCCAAGATCTGCTCACTCAGGTCCCCTTCTCCTGACTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCCAAGCCAAGATCTGCTCACTCAGGTCCCCTTCTCCTGACTTCC  738

seq1  CTGATGCCTGCAGCCCAGCAGCAGACACAAACACCCAGCACTAGCACATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGCCTGCAGCCCAGCAGCAGACACAAACACCCAGCACTAGCACATG  788

seq1  GAATGGCACGTGAGGAGCAGCAGGCATCCCCAGGGGTCTTCAACAGAACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCACGTGAGGAGCAGCAGGCATCCCCAGGGGTCTTCAACAGAACC  838

seq1  CCAAACACTCCCACCCTCTGCATCGTGGAATGACGGTGTGGATCTGTTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACACTCCCACCCTCTGCATCGTGGAATGACGGTGTGGATCTGTTCA  888

seq1  GGGTGCACAAAGGTTTCCCTGGCTGCTCCTGTGAAATAGGGACCAACTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCACAAAGGTTTCCCTGGCTGCTCCTGTGAAATAGGGACCAACTGT  938

seq1  TCTGGAATTC  960
      ||||||||||
seq2  TCTGGAATTC  948

seq1: chr1_191582468_191583496
seq2: B6Ng01-101K06.g_67_1076

seq1  GAATTCTAAGCCCATTTGGTAGTTCAGGAGTCTTCCTCAGACGATCCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGCCCATTTGGTAGTTCAGGAGTCTTCCTCAGACGATCCATC  50

seq1  AGTGGGAGAACGATCCATCAGTGGAAGAACGATCCATCAGTGGGAGAACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGAGAACGATCCATCAGTGGAAGAACGATCCATCAGTGGGAGAACG  100

seq1  ATCCATCAGTGGGAGAACGATCCATCAGTGGGAGAACGATCCATCAGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCAGTGGGAGAACGATCCATCAGTGGGAGAACGATCCATCAGTGG  150

seq1  GAGAACGATCCATCAGTGGGAGAACGATCCATCAGTGGGAGAACGGCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACGATCCATCAGTGGGAGAACGATCCATCAGTGGGAGAACGGCCCA  200

seq1  GGGAAGTTCTCATGACCTACAGGGCTCCTTTACAAAGTACCTTAAAATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGTTCTCATGACCTACAGGGCTCCTTTACAAAGTACCTTAAAATTA  250

seq1  TGACCACCAAGCACACTGTACAGAGAGGTTGAAGGCTTTCAGCCCCCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCACCAAGCACACTGTACAGAGAGGTTGAAGGCTTTCAGCCCCCCTC  300

seq1  CTTAATGCCCTTAAATAAGGGGTGCTATGCCTGGACTCGGACACCCTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATGCCCTTAAATAAGGGGTGCTATGCCTGGACTCGGACACCCTCAG  350

seq1  GCTAATTCTGCCCGCCGGATCTGGAGACTGACTGCTTTCTGGGAGCATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATTCTGCCCGCCGGATCTGGAGACTGACTGCTTTCTGGGAGCATGG  400

seq1  AGATGGCTAGAAATAAGCCACGGGCCCTCAGGTTCCCTCTCAGAATCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCTAGAAATAAGCCACGGGCCCTCAGGTTCCCTCTCAGAATCACC  450

seq1  TGAAGCTAAAGAAAGAGAAGGCACACAAGGGATAATGGGGAGATGGCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTAAAGAAAGAGAAGGCACACAAGGGATAATGGGGAGATGGCTCA  500

seq1  AGGAGGGGACGCTTCCAAGATTAGATGATCGTGAAGATGGCGCTGGCAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGGACGCTTCCAAGATTAGATGATCGTGAAGATGGCGCTGGCAAC  550

seq1  AATGAGTGAGCATATCCAGTCATGCTCTTACCGGCTGTAAATCCTTGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTGAGCATATCCAGTCATGCTCTTACCGGCTGTAAATCCTTGGCA  600

seq1  TGCGTTACAACAACCTTGTGAAGTAAGTGCTGTTACTGTCAGCCCTGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTTACAACAACCTTGTGAAGTAAGTGCTGTTACTGTCAGCCCTGGCT  650

seq1  CACCGGCGGGGAAACGGAGGTAGGGGTTAGTTGGCCGAGGCTGTTGTGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGGCGGGGAAACGGAGGTAGGGGTTAGTTGGCCGAGGCTGTTGTGGT  700

seq1  GGATGTGGGATTCTGATCCAGAAGTCAGGTGGCACAGGTAGAGTTCAGGG  750
      |||||||||||||||||||||||||||||||||||| |||||||||| ||
seq2  GGATGTGGGATTCTGATCCAGAAGTCAGGTGGCACA-GTAGAGTTCA-GG  748

seq1  TGAACCCGCAGAAGATGGCATTCAAAGGAGAGAGAGTGCTGGCTCTGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCGCAGAAGATGGCATTCAAAGGAGAGAGAGTGCTGGCTCTGTAT  798

seq1  ATGGATGTCACTTAGACCCTGGTCAACTGTTGCTAGGCAGAAAGTAAGGC  850
      ||||||||||||||||||||||||||||||| ||||||||||||||| ||
seq2  ATGGATGTCACTTAGACCCTGGTCAACTGTT-CTAGGCAGAAAGTAA-GC  846

seq1  CAGCGATGTTAGGTTTGGCTTTTTAAGAACTGAGAGGAATCAGTACTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGATGTTAGGTTTGGCTTTTTAAGAACTGAGAGGAATCAGTACTTTT  896

seq1  TGGTGAAGTAATTTGATGTTTAAGCGGTAGGATCCCTTTCAAAAATTTGT  950
      ||||| ||||||||||||||||||||||||||||||||||||||     |
seq2  TGGTG-AGTAATTTGATGTTTAAGCGGTAGGATCCCTTTCAAAA----TT  941

seq1  GAAAGATTTACTTTTATATAAGTTTATATAAGAGTTTCCCTACGTGTATG  1000
      | |||| |||| ||||||||   |||||| ||||||  |||||||| |||
seq2  GGAAGA-TTAC-TTTATATA--GTTATAT-AGAGTT--CCTACGTG-ATG  983

seq1  TCTGTGCACCGTGTGTGTGCCCGGTGCCC  1029
      |||||||||| |||||||| || ||||||
seq2  TCTGTGCACC-TGTGTGTGTCC-GTGCCC  1010