BAC Information

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BAC

Clone NameB6Ng01-102O05
Chromosome1 (Build37)
Map Location 28,603,159 - 28,604,206
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040952, EG433281
Downstream geneEG665903, Gm597, LOC435614, EG623924, EG433283
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102O05.bB6Ng01-102O05.g
ACCDH911647DH911648
length1,0451,208
definitionDH911647|Mus musculus domesticus DNA, BAC clone: B6Ng01-102O05, 5' end.DH911648|Mus musculus domesticus DNA, BAC clone: B6Ng01-102O05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttatttatctctgtacctcatttataatggggttatttgaatt
tctggagtccaacttcttgagctctttgtatatattggatattagtcccc
tatcagatttaggattggtacaaatcctttcccaatctcttggtgccctt
tttgtcttattaacagtttcttttgccttacagaagcgttgcaattttga
ggtcccatttgtcaattcttgatcttacagcacaagccattgctgttctg
tttaggaatttttcccctgtgcccatatcttcaaggcttttccccacttt
ctcctctataatcttcagtgtctctggttttatgtcaaggcctttgatac
acttagacttgagctttgtacaaggagataagaatagaacaattcacatt
cttctacatgataaccaccagttgtgccagcaccatttgttgaaaatgct
gtcatttttccactggatgattttagctcccttgtcaaagatcaagtgag
tttcttttccagcatttcttgtgaacccttttttgaatttgaaagtagca
acatgcttctcttgaagagtatcactatgaattgtgaattttaggttgta
gaatctcaaaataaccagatcctgtccaagaaattcaggcaagaagcctt
ttagaatccatttgggattcagtctgatgactattttattgttcccctgt
ggtggttccttcactatctatccttaacactgacatatgtgttaaccata
ttactaactaccaacactgtaagtgtaacaacctttgattactctcagtc
tgtatttgtttcttctacccacatttgtttctctctttttaaaatttttt
attagatattttcttcatttacatttcaaatgctatctcctttcctgttt
cctcccccaaagtaccctgtaccccctccctgccctgttcccaacccacc
cactcccacttactgggcctggcatcacagtcatctattggatggaacac
aggggcccaatgaaggagttaaaaaagtatctaagagctaaaggg
gaattcacgcagttgaatccttctcaacagtctgttttacgggaacactt
cattaccatgacccgcagttctggttccggactgagggatcttccttgcg
ccggttatggtaaccgtcccaggttttctcatcccaggatttctcgtccc
gggttttctcctctcgggtttcagcaccaactcttacacgcgttctcgag
accggccaggaagaacgcaacaaaccggaatcttctgcggcaaaacttta
ttgcttacatcttcaggagcaagagtgcaagagagcaagagctctattgc
ttacatctttaggagccagagcgcaagagcgcaagagcgcaagagtgcaa
gagagcaagagccagagcaagagctctattgcttacatctttaggagcca
gagcgcaagagcgcaagagagcaagagccagagcaagagagagaatggcg
aaaccccgtcccttttaaggagaattattctccgcctaggacgtattact
ccttgattggctgcagcccatcggccgagttgtcgtcacggggaaggcag
agcacatggggtggaaaactacccttggcacatgcgcagattatttgttt
accacttagaacacaggatgtcagcgccatcttgcaacggcgaatgtgag
ggcggctccccacatgtatgctttaaagattgtcaagcattagaatgtaa
atcattggatgtgttgtcctggggaagagatttttgtttatatttccaca
gattatgaaagaccatgggttccatcaaaattgttgaagatatgatctga
ataagagaaacgtccataagaaagatagtgctgtgttttatttatttatt
ttttattttatgatttattttttactggatatttttctttatttgccttt
aaatgttatcccctttccggtttcccccaccccaagaaacaccttatacc
atccctctacccttgcttttatgagggtatcccccactcattcacccact
cctttttttttcctctggcattcccctacactggatcatctatgcttcac
aggacattctctttccacggatgccttgaacagcaattctcttctacata
tagactgctggagccatggttctctatggtatctccttggttgtgattta
gactgaagaatcggggtactggtttgattggtaatgtgaattctctttca
atgagcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_28603159_28604206
seq2: B6Ng01-102O05.b_47_1090 (reverse)

seq1  CCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTTCATTGGGGCCCCTGT  50
      |||||||||| ||| | |||||| | || |||||||||| ||||||||||
seq2  CCCTTTAGCT-CTTAGATACTTT-TTTAACTCCTTCATT-GGGCCCCTGT  47

seq1  GTTCCATCCAATAGATGACTGTGATGCCAGGGCCAGTAAGTGGGAGTGGG  100
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTTCCATCCAATAGATGACTGTGATGCCAGGCCCAGTAAGTGGGAGTGGG  97

seq1  TGGGTTGGGGAACAGGGCAGGGAGGGGGTACAGGGTACTTTGGGGGAGGA  150
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTT-GGGAACAGGGCAGGGAGGGGGTACAGGGTACTTTGGGGGAGGA  146

seq1  AACAGGAAAGGAGATAGCATTTGAAATGTAAATGAAGAAAATATCTAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGAAAGGAGATAGCATTTGAAATGTAAATGAAGAAAATATCTAATA  196

seq1  AAAAATTTTAAAAAGAGAGAAACAAATGTGGGTAGAAGAAACAAATACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTTTAAAAAGAGAGAAACAAATGTGGGTAGAAGAAACAAATACAG  246

seq1  ACTGAGAGTAATCAAAGGTTGTTACACTTACAGTGTTGGTAGTTAGTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGAGTAATCAAAGGTTGTTACACTTACAGTGTTGGTAGTTAGTAAT  296

seq1  ATGGTTAACACATATGTCAGTGTTAAGGATAGATAGTGAAGGAACCACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTAACACATATGTCAGTGTTAAGGATAGATAGTGAAGGAACCACCA  346

seq1  CAGGGGAACAATAAAATAGTCATCAGACTGAATCCCAAATGGATTCTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGAACAATAAAATAGTCATCAGACTGAATCCCAAATGGATTCTAAA  396

seq1  AGGCTTCTTGCCTGAATTTCTTGGACAGGATCTGGTTATTTTGAGATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCTTGCCTGAATTTCTTGGACAGGATCTGGTTATTTTGAGATTCT  446

seq1  ACAACCTAAAATTCACAATTCATAGTGATACTCTTCAAGAGAAGCATGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCTAAAATTCACAATTCATAGTGATACTCTTCAAGAGAAGCATGTT  496

seq1  GCTACTTTCAAATTCAAAAAAGGGTTCACAAGAAATGCTGGAAAAGAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTTCAAATTCAAAAAAGGGTTCACAAGAAATGCTGGAAAAGAAAC  546

seq1  TCACTTGATCTTTGACAAGGGAGCTAAAATCATCCAGTGGAAAAATGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGATCTTTGACAAGGGAGCTAAAATCATCCAGTGGAAAAATGACA  596

seq1  GCATTTTCAACAAATGGTGCTGGCACAACTGGTGGTTATCATGTAGAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTCAACAAATGGTGCTGGCACAACTGGTGGTTATCATGTAGAAGA  646

seq1  ATGTGAATTGTTCTATTCTTATCTCCTTGTACAAAGCTCAAGTCTAAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAATTGTTCTATTCTTATCTCCTTGTACAAAGCTCAAGTCTAAGTG  696

seq1  TATCAAAGGCCTTGACATAAAACCAGAGACACTGAAGATTATAGAGGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAGGCCTTGACATAAAACCAGAGACACTGAAGATTATAGAGGAGA  746

seq1  AAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTAAAC  796

seq1  AGAACAGCAATGGCTTGTGCTGTAAGATCAAGAATTGACAAATGGGACCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGCAATGGCTTGTGCTGTAAGATCAAGAATTGACAAATGGGACCT  846

seq1  CAAAATTGCAACGCTTCTGTAAGGCAAAAGAAACTGTTAATAAGACAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTGCAACGCTTCTGTAAGGCAAAAGAAACTGTTAATAAGACAAAA  896

seq1  AGGGCACCAAGAGATTGGGAAAGGATTTGTACCAATCCTAAATCTGATAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCACCAAGAGATTGGGAAAGGATTTGTACCAATCCTAAATCTGATAG  946

seq1  GGGACTAATATCCAATATATACAAAGAGCTCAAGAAGTTGGACTCCAGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTAATATCCAATATATACAAAGAGCTCAAGAAGTTGGACTCCAGAA  996

seq1  ATTCAAATAACCCCATTATAAATGAGGTACAGAGATAAATAAAGAATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAATAACCCCATTATAAATGAGGTACAGAGATAAATAAAGAATT  1044