BAC Information

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BAC

Clone NameB6Ng01-103N24
Chromosome1 (Build37)
Map Location 81,435,355 - 81,605,806
singlet/doubletdoublet
Overlap geneEG621020
Upstream gene1700016L21Rik, Dock10, LOC665092, 9430031J16Rik
Downstream geneLOC433328, EG665145, Irs1, Rhbdd1, Col4a4, Col4a3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103N24.bB6Ng01-103N24.g
ACCDH912334DH912335
length1,1781,018
definitionDH912334|Mus musculus domesticus DNA, BAC clone: B6Ng01-103N24, 5' end.DH912335|Mus musculus domesticus DNA, BAC clone: B6Ng01-103N24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,435,355 - 81,436,524)(81,604,785 - 81,605,806)
sequence
gaattcacttaaagtagaataaattgttagaattgctcccctgggtgtcc
attagagctttatggcagatttaaggagttagaatgtctcacggcagacc
caggaggcttgagtatctctttgatcaattattgtgcttccattaaaata
tttttacttcactgtgggacatcttgatcgccctgcatattggtagaact
gtcagatcatctaagcttttgattttaaaggttattgcctcgtagtgcca
atgtgtcctatgtttaagaattgaacatgccatggatacaaatctttcat
gctggatacaattggcttctctatgcagtgaaagatgctccacaaaatat
ccagcgaaatctgtgcactgcttctcaacaattttgatgataaagtgaca
tacacagtgtctttgatgattgtgctatgccagtagctttataaaaaact
aaatggtatagatatctactgtgtctctctatatgatttagtagtatttc
tttgaattcaacgttgatgcaaagggcattattggcaaatggatattcac
taccacaaccatctgtcctacaaacattacctgtgaatgttaaacctatt
ctttaagaatttgttggatcatttactaaatagtaacaatgtgtaacaaa
tacttaccccattaaatcagagggaagatatgaaaattgcttggaaatct
ggagaatattttgatgccttgatctataatgtacagagtggtatatatca
taacagttcaaacaaaagtttttattactaatataatatataatataatt
tatttcttacttattttatatttgtagtgagattatatacaacacttcca
gacatgaagtgtccagtccaatatttgaacaagagtgttcagtcatattt
atacaggcattaaatgctgttgttgttgaaattttaaaattaatttttat
tatctttcatttatatttatttaattcagaatcagttctagtgaaatatt
atgaatacaatgaaagtcatgttaaggggatgggaaatgtttgctccagt
agtggaatttgtttttctcttaagcataaagtcctaggttctaacccttt
gaactgaaaaacaagcagaaaagaaatgtcaggtgattcatgttctgcca
cctagccaaccagcattttataagtaaa
gaattctgctgagggtaattaaacgtggtacttccttaagatgtttgtta
ttattcagtgtaattcatctctgtaaagtgctagagtgaacctcctttga
aggactcctctttgctgtcaaggtggaattcccaacattgtttctttgcc
cctgaggtcattcccaacccccttccttgagctgtgggaaagaaaggtca
gaaggctgtgtgtcactcattttaatgtatgccagcccacctagaaggtt
gcaatatttcctccgggaagttttcattcacttgacatcctgaagggtta
aaaaaacagagccatagcattatagagttgttgctgatgttgccaaggaa
accagagaaggaatgttggagtatcttgtttctccctaaatccacagggg
tgtagcttgtttgggggtttgatgtcctcttgattcttggtgtagtttct
ccatgggaaggtttccggctgggccaggacgccatggaagccaacagtga
ggatcacaggcccttgaagctctggcagaactgactttgcaccttcctcc
aaaaaacaggctaagggaaatttgattttattataaaaataagaaaaaca
gagatgagagaagaggaagaaactagaagggagggaaagggaagagaagg
aaagggaggagaatagaaaataatttctaaagtttcctccctaaatattg
gctataaattgtttttctccagatatgaataacagcagcctctcttagta
ttttttccaacaataaataaatggttttgagtagcaacatcatgggaaga
ttgaatatacgagggaagagaaacagtgatggtctttagaggtgttctaa
aggcgcaggatgttgggatatgatgggatggacttactcgatagagattt
ctactgctttccatgggttataaactgagtgatatcatcttcttagaaga
tatattatccaataaaataatatagagaattctgagcctggtatctcaaa
ggtactcattgttacatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_81435355_81436524
seq2: B6Ng01-103N24.b_45_1222

seq1  GAATTCACTTAAAGTAGAATAAATTGTTAGAAGTGCTCCCCTGGGTGTCC  50
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GAATTCACTTAAAGTAGAATAAATTGTTAGAATTGCTCCCCTGGGTGTCC  50

seq1  ATTAGAGCTTTATGGCAGATTTAAGGAGTTAGAATGTCTCACGGCAGACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGCTTTATGGCAGATTTAAGGAGTTAGAATGTCTCACGGCAGACC  100

seq1  CAGGAGGCTTGAGTATCTCTTTGATCAATTATTGTGCTTCCATTAAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGCTTGAGTATCTCTTTGATCAATTATTGTGCTTCCATTAAAATA  150

seq1  TTTTTACTTCACTGTGGGACATCTTGATCGCCCTGCATATTGGTAGAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACTTCACTGTGGGACATCTTGATCGCCCTGCATATTGGTAGAACT  200

seq1  GTCAGATCATCTAAGCTTTTGATTTTAAAGGTTATTGCCTCGTAGTGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGATCATCTAAGCTTTTGATTTTAAAGGTTATTGCCTCGTAGTGCCA  250

seq1  ATGTGTCCTATGTTTAAGAATTGAACATGCCATGGATACAAATCTTTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCCTATGTTTAAGAATTGAACATGCCATGGATACAAATCTTTCAT  300

seq1  GCTGGATACAATTGGCTTCTCTATGCAGTGAAAGATGCTCCACAAAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGATACAATTGGCTTCTCTATGCAGTGAAAGATGCTCCACAAAATAT  350

seq1  CCAGCGAAATCTGTGCACTGCTTCTCAACAATTTTGATGATAAAGTGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCGAAATCTGTGCACTGCTTCTCAACAATTTTGATGATAAAGTGACA  400

seq1  TACACAGTGTCTTTGATGATTGTGCTATGCCAGTAGCTTTATAAAAAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGTGTCTTTGATGATTGTGCTATGCCAGTAGCTTTATAAAAAACT  450

seq1  AAATGGTATAGATATCTACTGTGTCTCTCTATATGATTTAGTAGTATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTATAGATATCTACTGTGTCTCTCTATATGATTTAGTAGTATTTC  500

seq1  TTTGAATTCAACGTTGATGCAAAGGGCATTATTGGCAAATGGATATTCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATTCAACGTTGATGCAAAGGGCATTATTGGCAAATGGATATTCAC  550

seq1  TACCACAACCATCTGTCCTACAAACATTACCTGTGAATGTTAAACCTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACAACCATCTGTCCTACAAACATTACCTGTGAATGTTAAACCTATT  600

seq1  CTTTAAGAATTTGTTGGATCATTTACTAAATAGTAACAATGTGTAACAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGAATTTGTTGGATCATTTACTAAATAGTAACAATGTGTAACAAA  650

seq1  TACTTACCCCATTAAATCAGAGGGAAGATATGAAAATTGCTTGGAAATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACCCCATTAAATCAGAGGGAAGATATGAAAATTGCTTGGAAATCT  700

seq1  GGAGAATATTTTGATGCCTTGATCTATAATGTACAGAGTGGTATATATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAATATTTTGATGCCTTGATCTATAATGTACAGAGTGGTATATATCA  750

seq1  TAACAGTTC-AACAAAAGTTTTTATTACTAATATAATATATAATATAATT  799
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTTCAAACAAAAGTTTTTATTACTAATATAATATATAATATAATT  800

seq1  TATTTCTTACTTATTTTATATTTGTAGTGAGATTTATATACAACACTTCC  849
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TATTTCTTACTTATTTTATATTTGTAGTGAGA-TTATATACAACACTTCC  849

seq1  AGACATGAAGTGTCCAGTCCAATATTTGAACAAGAGTGTTCAGTCATATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGAAGTGTCCAGTCCAATATTTGAACAAGAGTGTTCAGTCATATT  899

seq1  TATACAGGCATTAAATGCTGTTGTTGTTGAAATTTTAAAA-TAATTTTTA  948
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TATACAGGCATTAAATGCTGTTGTTGTTGAAATTTTAAAATTAATTTTTA  949

seq1  TTATCTTTCATTTATAATTATTTAAATTCAGAATCAGTTCTAGTGAAATA  998
      |||||||||||||||| |||||| ||||||||||||||||||||||||||
seq2  TTATCTTTCATTTATATTTATTT-AATTCAGAATCAGTTCTAGTGAAATA  998

seq1  TAATGAATACAATGAAAGTCATGTT-AGGGGATGGG-AATG-TTGCT-CA  1044
      | ||||||||||||||||||||||| |||||||||| |||| ||||| ||
seq2  TTATGAATACAATGAAAGTCATGTTAAGGGGATGGGAAATGTTTGCTCCA  1048

seq1  GTAGTGGAATTTG-TTTTCTCCTAAGCATAAGGTCCTA-GTTTTCATACC  1092
      ||||||||||||| ||||||| ||||||||| |||||| ||| | |  | 
seq2  GTAGTGGAATTTGTTTTTCTCTTAAGCATAAAGTCCTAGGTTCTAACCCT  1098

seq1  TTGAACTGAAAACAAAGCAGAAAAAGAATGTCAGGTGA-TCATG-TCTGC  1140
      ||||||||||||  ||||||||||  |||||||||||| ||||| |||||
seq2  TTGAACTGAAAAACAAGCAGAAAAGAAATGTCAGGTGATTCATGTTCTGC  1148

seq1  ACACTAGGCAAACCAGCA-TTTATGAGTAAA  1170
       |||   || |||||||| ||||| ||||||
seq2  -CACCTAGCCAACCAGCATTTTATAAGTAAA  1178

seq1: chr1_81604785_81605806
seq2: B6Ng01-103N24.g_69_1086 (reverse)

seq1  AATGTAAACAAATGAGTA-CTTTGAGATACCA-GCTCAGAATTCTTCCTA  48
      |||||||   |||||||| ||||||||||||| ||||||||||||  |||
seq2  AATGTAA--CAATGAGTACCTTTGAGATACCAGGCTCAGAATTCT--CTA  46

seq1  TATTTATTTTATTTGGAT-ATATATCTTCTAAAGAAGATGATATCACTCA  97
      || |||||||| |||||| ||||||||||| |||||||||||||||||||
seq2  TA-TTATTTTA-TTGGATAATATATCTTCT-AAGAAGATGATATCACTCA  93

seq1  GTTTATAACCCATGGAAAGCAGTAGAAATCTCTATCGAGTAAGTCCATCC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATAACCCATGGAAAGCAGTAGAAATCTCTATCGAGTAAGTCCATCC  143

seq1  CATCATATCCCAACATCCTGCGCCTTTAGAACACCTCTAAAGACCATCAC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATATCCCAACATCCTGCGCCTTTAGAACACCTCTAAAGACCATCAC  193

seq1  TGTTTCTCTTCCCTCGTATATTCAATCTTCCCATGATGTTGCTACTCAAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTCTTCCCTCGTATATTCAATCTTCCCATGATGTTGCTACTCAAA  243

seq1  ACCATTTATTTATTGTTGGAAAAAATACTAAGAGAGGCTGCTGTTATTCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTATTTATTGTTGGAAAAAATACTAAGAGAGGCTGCTGTTATTCA  293

seq1  TATCTGGAGAAAAACAATTTATAGCCAATATTTAGGGAGGAAACTTTAGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGAGAAAAACAATTTATAGCCAATATTTAGGGAGGAAACTTTAGA  343

seq1  AATTATTTTCTATTCTCCTCCCTTTCCTTCTCTTCCCTTTCCCTCCCTTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTTCTATTCTCCTCCCTTTCCTTCTCTTCCCTTTCCCTCCCTTC  393

seq1  TAGTTTCTTCCTCTTCTCTCATCTCTGTTTTTCTTATTTTTATAATAAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTCTTCCTCTTCTCTCATCTCTGTTTTTCTTATTTTTATAATAAAA  443

seq1  TCAAATTTCCCTTAGCCTGTTTTTTGGAGGAAGGTGCAAAGTCAGTTCTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTTCCCTTAGCCTGTTTTTTGGAGGAAGGTGCAAAGTCAGTTCTG  493

seq1  CCAGAGCTTCAAGGGCCTGTGATCCTCACTGTTGGCTTCCATGGCGTCCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCTTCAAGGGCCTGTGATCCTCACTGTTGGCTTCCATGGCGTCCT  543

seq1  GGCCCAGCCGGAAACCTTCCCATGGAGAAACTACACCAAGAATCAAGAGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAGCCGGAAACCTTCCCATGGAGAAACTACACCAAGAATCAAGAGG  593

seq1  ACATCAAACCCCCAAACAAGCTACACCCCTGTGGATTTAGGGAGAAACAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAAACCCCCAAACAAGCTACACCCCTGTGGATTTAGGGAGAAACAA  643

seq1  GATACTCCAACATTCCTTCTCTGGTTTCCTTGGCAACATCAGCAACAACT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTCCAACATTCCTTCTCTGGTTTCCTTGGCAACATCAGCAACAACT  693

seq1  CTATAATGCTATGGCTCTGTTTTTTTAACCCTTCAGGATGTCAAGTGAAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAATGCTATGGCTCTGTTTTTTTAACCCTTCAGGATGTCAAGTGAAT  743

seq1  GAAAACTTCCCGGAGGAAATATTGCAACCTTCTAGGTGGGCTGGCATACA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTTCCCGGAGGAAATATTGCAACCTTCTAGGTGGGCTGGCATACA  793

seq1  TTAAAATGAGTGACACACAGCCTTCTGACCTTTCTTTCCCACAGCTCAAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGAGTGACACACAGCCTTCTGACCTTTCTTTCCCACAGCTCAAG  843

seq1  GAAGGGGGTTGGGAATGACCTCAGGGGCAAAGAAACAATGTTGGGAATTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGGTTGGGAATGACCTCAGGGGCAAAGAAACAATGTTGGGAATTC  893

seq1  CACCTTGACAGCAAAGAGGAGTCCTTCAAAGGAGGTTCACTCTAGCACTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTGACAGCAAAGAGGAGTCCTTCAAAGGAGGTTCACTCTAGCACTT  943

seq1  TACAGAGATGAATTACACTGAATAATAACAAACATCTTAAGGAAGTACCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGATGAATTACACTGAATAATAACAAACATCTTAAGGAAGTACCA  993

seq1  CGTTTAATTACCCTCAGCAGAATTC  1022
      |||||||||||||||||||||||||
seq2  CGTTTAATTACCCTCAGCAGAATTC  1018