BAC Information

Click to search

BAC

Clone NameB6Ng01-105A16
Chromosome1 (Build37)
Map Location 145,419,387 - 145,419,911
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC545369
Downstream geneCdc73, B3galt2, LOC623138, Glrx2, Trove2, Uchl5, Rgs2, Rgs13, Rbm6-ps2, Rgs1, EG639456, Rgs21
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105A16.bB6Ng01-105A16.g
ACCDH913170DH913171
length5191,180
definitionDH913170|Mus musculus domesticus DNA, BAC clone: B6Ng01-105A16, 5' end.DH913171|Mus musculus domesticus DNA, BAC clone: B6Ng01-105A16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tgcatgtatgtgggtaccagccaaagccagaagaaggcactgggtcctct
gaagctagaattacatgcatttatgagacactcaacatggatgctaggaa
ctgagcgtgggttctttgcaagagcagcaagtggtcttaaccactgagcc
atgtaccctgtctctcaatattattttaagaccatgtaaataccatgcct
cctctaaaatatttcttctgtatttagcatctattaacttgtcttccctg
aatatatcttttccataattattacaaattgtggctttccaactcccaca
cctttgtcatcattccacagagactttatttttcaatcaatatatttaaa
tatatacttttatcttaactcaaatgttccaacttttaaaaaagacagaa
ccatcactctgccacctttgccctgtggaatatctttccacctacttctt
gtgtttttatgacatttctccattggtgtgtgtatgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgccaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaagaatgaatttatgaaattcctagccaaa
tggatggacctggagggcatcatcctgagtgaggtaacacattcacaaag
gaactcacacaatatgtactcactgataggtggatattagaccaaaacct
aggatacccaaagatataagatacaatttcctaaacacatgaaactcaaa
aatgaagactgaagagtggatactatgcccctccttagaagtgggaacaa
aacacccatggaaggagttacagagataaagtttggagctgagatgaaag
ggatggaccatgtagagactgccatatccagggatccaccccataatcag
catccaaatgctgacaccattgcatacactagcaatattttatcgaaagg
acccagatgtagctgtctctgtgagaactatgcaggggcctagcaaacac
aagagtggatgctcacagtcagcttaatgggatggattcacagggctccc
aattggaggagctagaagaaagaacccaagggagcctaaaggaatcttgc
atccttatagtggaacaacattatgactaaccagataccccggacttctt
tgactctagctgcatatgttatcaaaagatggtctagtctggcacttcac
tggaagaagaaaccattggaacagcaactttatatgcccagacacgggtg
actgctatgtgtaaaatatgagagtagtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_145419387_145419911
seq2: B6Ng01-105A16.b_42_566 (reverse)

seq1  ACACACACACACACACACACACACACACACACACATACACACACCAATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACATACACACACCAATGG  50

seq1  AGAAATGTCATAAAAACACAAGAAGTAGGTGGAAAGATATTCCACAGGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGTCATAAAAACACAAGAAGTAGGTGGAAAGATATTCCACAGGGC  100

seq1  AAAGGTGGCAGAGTGATGGTTCTGTCTTTTTTAAAAGTTGGAACATTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGGCAGAGTGATGGTTCTGTCTTTTTTAAAAGTTGGAACATTTGA  150

seq1  GTTAAGATAAAAGTATATATTTAAATATATTGATTGAAAAATAAAGTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGATAAAAGTATATATTTAAATATATTGATTGAAAAATAAAGTCTC  200

seq1  TGTGGAATGATGACAAAGGTGTGGGAGTTGGAAAGCCACAATTTGTAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAATGATGACAAAGGTGTGGGAGTTGGAAAGCCACAATTTGTAATA  250

seq1  ATTATGGAAAAGATATATTCAGGGAAGACAAGTTAATAGATGCTAAATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGGAAAAGATATATTCAGGGAAGACAAGTTAATAGATGCTAAATAC  300

seq1  AGAAGAAATATTTTAGAGGAGGCATGGTATTTACATGGTCTTAAAATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAATATTTTAGAGGAGGCATGGTATTTACATGGTCTTAAAATAAT  350

seq1  ATTGAGAGACAGGGTACATGGCTCAGTGGTTAAGACCACTTGCTGCTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGAGACAGGGTACATGGCTCAGTGGTTAAGACCACTTGCTGCTCTT  400

seq1  GCAAAGAACCCACGCTCAGTTCCTAGCATCCATGTTGAGTGTCTCATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGAACCCACGCTCAGTTCCTAGCATCCATGTTGAGTGTCTCATAAA  450

seq1  TGCATGTAATTCTAGCTTCAGAGGACCCAGTGCCTTCTTCTGGCTTTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTAATTCTAGCTTCAGAGGACCCAGTGCCTTCTTCTGGCTTTGGC  500

seq1  TGGTACCCACATACATGCAGAATTC  525
      |||||||||||||||||||||||||
seq2  TGGTACCCACATACATGCAGAATTC  525