BAC Information

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BAC

Clone NameB6Ng01-106I07
Chromosome1 (Build37)
Map Location 14,624,964 - 14,626,091
singlet/doubletsinglet
Overlap genenone
Upstream geneLactb2, Xkr9, LOC100039843, EG433273, LOC100039859, LOC100039869, Eya1, LOC665391
Downstream geneMsc, Smt3h2-ps4, EG665407, Trpa1, EG269105, LOC100039949, LOC100039959, Kcnb2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106I07.bB6Ng01-106I07.g
ACCDH914234DH914235
length1,1241,170
definitionDH914234|Mus musculus domesticus DNA, BAC clone: B6Ng01-106I07, 5' end.DH914235|Mus musculus domesticus DNA, BAC clone: B6Ng01-106I07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacatattttaacaatttcctccatccccagtgaaattatgctaa
tattttagttgagtttcctcaagtctggaactcaaattaagtctgtctgt
ttcatttttatgatagtgcttgaaatcacttgcagacaaggggttgttgg
gctatgagatttatagcagcattgccacgaaggtcaaacgcatcctgagg
aagaggaaagcaatctgtagaaccagtgttttcactgcaataaactttat
agcagcattaagggagtagttacaaatcagccggacggtgttgatttcat
tgagaataagtgtatttacacttgtaagcctcctcttcataatattctca
atgttttacacaatggggttagtgaaggttggatctgggcatatttcacc
actgacaaaatttgtttttctttttcccacccatccttgttgcctttcag
aaaatgggtttacactgcctctataggggctggtcaagtcaagactgaga
aatgttctgacatttgcaaagaagtcaaagataatatagaaatgaaaatt
aaatgtatttactctatttatgtggttaaagatgagagaaatctaaagga
ataaaagtgctcagaatacttttttaaagtaccctttagattagtaattt
cttcttgttgtagctagttttgcagtatttaaattttcaatgaatttttt
tgcttatattatttaaattgctggtttggtttcctcatttaaaagggcaa
ggcacgggcaagcaatgtggctccttgatggagcaggtgacatactcaag
ttcccaggttcaatccccagttcaggaagcatgtaattagacagaaaata
aatacattttaagaagcggcaaggtattcctcatcctttattagacctat
ataaaatgtttatgctaaacattgtcttcattagtatcatgcactggtta
cttcttataactaatccaaggaaaagtgtatagctatgttgatttgatta
caggaacagtgtttgcctgttggttatttccttatgtatcctgcctcttg
tccactaggttttaaacacaaggagtcagggaacttgtccattcccaatt
actacccagggacgcgaagactga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcctgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaagaacacatgctccactat
gttcatagcagccttgtttacagtagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggtatcatcctgagtgaagtaacccaatcacaaa
gaaactcgcacaatatgtactcactgataagtggatattagcccagaaac
ttaggataccaaagatataagatacaacttgccaaatgcatgaaattcaa
gaagaacgaagaccaaagtgtggacaccttaccctttcttagaaatggga
acaaaacacccatagaaggagttacagagacaaaatttggagctgtgacg
aaaggatggaccatctagtgattgccatatgcagggatccatcctgtaat
cagcttccaaatgctgacaccattgcatacactagcaagattttgctgaa
aggacccagatatagctctctcttgtgagactatgccggggcctagcaaa
cacagaagtggatgatcacagtcagctattggatgggtcacacggcccca
aatgcaggagctagaagatattatccaaggagctaaaggtactgcaaccc
tataggtgaacaacaatatgaactaccagtacctgggagctcttgtcttc
gctgcaatatgtatcaaagatgcttagttggccatcacttcaagagaagt
cccttgactgcaaatcttatattgccagtatcaggaacctcagggccaaa
tggggattgtgtgtggtagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_14624964_14626091
seq2: B6Ng01-106I07.b_47_1170 (reverse)

seq1  TCAGTCATCGCGTACCCTGGGTATGTAATTGGGAATGAGACAAGGTCCCT  50
      |||||| |||||| ||||||||| ||||||||||||| |||||| |||||
seq2  TCAGTCTTCGCGT-CCCTGGGTA-GTAATTGGGAATG-GACAAGTTCCCT  47

seq1  GACTTCCTGGTGTTTAAAACCTAGTGGACAAGAGGCAGGATACATAAGGA  100
      ||| |||| |||||||||||||||||||||||||||||||||||||||||
seq2  GAC-TCCTTGTGTTTAAAACCTAGTGGACAAGAGGCAGGATACATAAGGA  96

seq1  AATAAACAACAGGCAAAACAACTGTCCCTGTAAATCAAATC-ACATAGCT  149
      ||||| |||||||||||   ||||| ||||| ||||||||| ||||||||
seq2  AATAACCAACAGGCAAA--CACTGTTCCTGT-AATCAAATCAACATAGCT  143

seq1  ATACAC-TTTCCTTGGATTAGTTATAAG-AGTAA-CAGTGCATGATACTA  196
      |||||| ||||||||||||||||||||| ||||| |||||||||||||||
seq2  ATACACTTTTCCTTGGATTAGTTATAAGAAGTAACCAGTGCATGATACTA  193

seq1  ATGAAGACAATGTTTAGCATAAACATTTTATATTAGGTCTAATAAAGGAT  246
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATGAAGACAATGTTTAGCATAAACATTTTATA-TAGGTCTAATAAAGGAT  242

seq1  GAGGAATACCTTGCCGCTTCTTAAAATGTATTTATTTTCTGTCTAATTAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAATACCTTGCCGCTTCTTAAAATGTATTTATTTTCTGTCTAATTAC  292

seq1  CTGCTTCCTGAACTGGGGATTGAACCTGGGAACTTGAGTATGTCACCTGC  346
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTCCTGAACTGGGGATTGAACCTGGGAACTTGAGTATGTCACCTGC  342

seq1  TCCATCAAGGAGCCACATTGCTTGCCCCTGCCTTGCCCTTTTAAATGAGG  396
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCCATCAAGGAGCCACATTGCTTGCCCGTGCCTTGCCCTTTTAAATGAGG  392

seq1  AAACCAAACCAGCAATTTAAATAATATAAGCAAAAAAATTCATTGAAAAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAACCAGCAATTTAAATAATATAAGCAAAAAAATTCATTGAAAAT  442

seq1  TTAAATACTGCAAAACTAGCTACAACAAGAAGAAATTACTAATCTAAAGG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATACTGCAAAACTAGCTACAACAAGAAGAAATTACTAATCTAAAGG  492

seq1  GTACTTTAAAAAAGTATTCTGAGCACTTTTATTCCTTTAGATTTCTCTCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTAAAAAAGTATTCTGAGCACTTTTATTCCTTTAGATTTCTCTCA  542

seq1  TCTTTAACCACATAAATAGAGTAAATACATTTAATTTTCATTTCTATATT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAACCACATAAATAGAGTAAATACATTTAATTTTCATTTCTATATT  592

seq1  ATCTTTGACTTCTTTGCAAATGTCAGAACATTTCTCAGTCTTGACTTGAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGACTTCTTTGCAAATGTCAGAACATTTCTCAGTCTTGACTTGAC  642

seq1  CAGCCCCTATAGAGGCAGTGTAAACCCATTTTCTGAAAGGCAACAAGGAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCCTATAGAGGCAGTGTAAACCCATTTTCTGAAAGGCAACAAGGAT  692

seq1  GGGTGGGAAAAAGAAAAACAAATTTTGTCAGTGGTGAAATATGCCCAGAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGAAAAAGAAAAACAAATTTTGTCAGTGGTGAAATATGCCCAGAT  742

seq1  CCAACCTTCACTAACCCCATTGTGTAAAACATTGAGAATATTATGAAGAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCTTCACTAACCCCATTGTGTAAAACATTGAGAATATTATGAAGAG  792

seq1  GAGGCTTACAAGTGTAAATACACTTATTCTCAATGAAATCAACACCGTCC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTTACAAGTGTAAATACACTTATTCTCAATGAAATCAACACCGTCC  842

seq1  GGCTGATTTGTAACTACTCCCTTAATGCTGCTATAAAGTTTATTGCAGTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGATTTGTAACTACTCCCTTAATGCTGCTATAAAGTTTATTGCAGTG  892

seq1  AAAACACTGGTTCTACAGATTGCTTTCCTCTTCCTCAGGATGCGTTTGAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACTGGTTCTACAGATTGCTTTCCTCTTCCTCAGGATGCGTTTGAC  942

seq1  CTTCGTGGCAATGCTGCTATAAATCTCATAGCCCAACAACCCCTTGTCTG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGTGGCAATGCTGCTATAAATCTCATAGCCCAACAACCCCTTGTCTG  992

seq1  CAAGTGATTTCAAGCACTATCATAAAAATGAAACAGACAGACTTAATTTG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGATTTCAAGCACTATCATAAAAATGAAACAGACAGACTTAATTTG  1042

seq1  AGTTCCAGACTTGAGGAAACTCAACTAAAATATTAGCATAATTTCACTGG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAGACTTGAGGAAACTCAACTAAAATATTAGCATAATTTCACTGG  1092

seq1  GGATGGAGGAAATTGTTAAAATATGTGAATTC  1128
      ||||||||||||||||||||||||||||||||
seq2  GGATGGAGGAAATTGTTAAAATATGTGAATTC  1124