BAC Information

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BAC

Clone NameB6Ng01-106K15
Chromosome1 (Build37)
Map Location 134,597,055 - 134,752,454
singlet/doubletdoublet
Overlap geneNfasc
Upstream gene5430435G22Rik, Slc26a9, 4732466D17Rik, Slc41a1, Rab7l1, Nucks1, Slc45a3, Elk4, Mfsd4, Pctk3, LOC100042221, Lemd1, EG638532, Klhdc8a, Nuak2, Tmcc2, Ripk5, Rbbp5, Tmem81, Cntn2
Downstream geneLrrn2, Mdm4, LOC638636, Pik3c2b, Ppp1r15b, Plekha6, Golt1a, Kiss1, LOC100038824, Ren1, Etnk2, Sox13, LOC667371, Snrpe, Zc3h11a, LOC667118, Lax1, Atp2b4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106K15.bB6Ng01-106K15.g
ACCDH914339DH914340
length1,110529
definitionDH914339|Mus musculus domesticus DNA, BAC clone: B6Ng01-106K15, 5' end.DH914340|Mus musculus domesticus DNA, BAC clone: B6Ng01-106K15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,597,055 - 134,598,167)(134,751,920 - 134,752,454)
sequence
gaattctttgtttagctctgagccccatttttaatggggttatttgattt
tctggagtccagcttcttgagttctttatatatattggatattagtcccc
tatcagatttaggataggtaaagatcctttcccaatctgttgggggcttt
tttgtcttattgacggtgtcttttgccttacagaagctttgcaattttat
gaggtcccatttgtcttcttaaggaaaacataattttgccagatacccat
gataacctgggtaatagttattcaaaaagaacaatacttgtatacttaag
aaataatcctgacaatatctttgctatataagtctctcatctagccaaat
ggccagacttggggtctcctgatctgtttaaactgttcaaagtctagctt
caggctgtgacctaacagagatttcaggataacagaatacgtaaaattca
taagcctaagttgtatacaagttattgaaatcttctatttaaggccagct
cccatttgagcatgagccagacctggacccacatgtgctatcagagcctt
ttcctttatgaatctgtaagtgtacaagagtgatttctcactggaaagga
atattatttctgtaacaaaataagccaaacacaaaaagacaaatgatgaa
tggctgcatctatctgagttcctgatatagttaaacttgcagaggcagag
gcggcatggcacttatctatcaggggacagaaggaaggaaaatggagagt
taatgtctaatgagaatgcttttgcattgggagtgaggcagcatagagag
gcagggaaatgaaaaagacacgggaagaggaaggaccaccttactgtggg
gatctggctgagcagccagaatttcaacataactgaaaccagggactact
tagagacagatagactatccaagagatatctcgagggtataaggataaca
gaccatgcctagtgagaccagagtgtcttcggcttcaggttacacttctc
atcatccatacacctaagcatgcatctcataaaaatccacttgcatgtca
ttcatgaaagggaatcactaaagaaaatgggcctagcaggtcatgtacat
tttactactt
ttggatgaacttaagaatatgggggacagttatgccaatagccagttctt
tctgtcagaggcatagatgagatatagaaaacagtgaaagacagctagtg
cagcatacttcaccagcttagggcacagtcttcacagatcttctgttttt
aattgctttcctttatttttactttatgggcatgagtgtttgcttggatg
gattgttgtgcactgttgaatccagcacccacagaggcaggcagagggag
tcagatgacctggaactggagttacagacagttgtgagccatcatgtggg
tgaagggaactcaggtcctttggaagtgaagcctgggctccgaactgctg
aacctctttccccatcccagacagatcggttaatatgtaaatgaatcctc
cagggagccacctgaaaaggaagttctgcttctacagcttggtgccttct
ccttctctcctcatgttggtaagaaaaaaaatgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgagactgaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_134597055_134598167
seq2: B6Ng01-106K15.b_46_1155

seq1  GAATTCTTTGTTTAGCTCTGAGCCCCATTTTTAATGGGGTTATTTGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGAGCCCCATTTTTAATGGGGTTATTTGATTT  50

seq1  TCTGGAGTCCAGCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGTCCAGCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCC  100

seq1  TATCAGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGGGGCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGGGGCTTT  150

seq1  TTTGTCTTATTGACGGTGTCTTTTGCCTTACAGAAGCTTTGCAATTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTATTGACGGTGTCTTTTGCCTTACAGAAGCTTTGCAATTTTAT  200

seq1  GAGGTCCCATTTGTCTTCTTAAGGAAAACATAATTTTGCCAGATACCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCCCATTTGTCTTCTTAAGGAAAACATAATTTTGCCAGATACCCAT  250

seq1  GATAACCTGGGTAATAGTTATTCAAAAAGAACAATACTTGTATACTTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACCTGGGTAATAGTTATTCAAAAAGAACAATACTTGTATACTTAAG  300

seq1  AAATAATCCTGACAATATCTTTGCTATATAAGTCTCTCATCTAGCCAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATCCTGACAATATCTTTGCTATATAAGTCTCTCATCTAGCCAAAT  350

seq1  GGCCAGACTTGGGGTCTCCTGATCTGTTTAAACTGTTCAAAGTCTAGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGACTTGGGGTCTCCTGATCTGTTTAAACTGTTCAAAGTCTAGCTT  400

seq1  CAGGCTGTGACCTAACAGAGATTTCAGGATAACAGAATACGTAAAATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGTGACCTAACAGAGATTTCAGGATAACAGAATACGTAAAATTCA  450

seq1  TAAGCCTAAGTTGTATACAAGTTATTGAAATCTTCTATTTAAGGCCAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCTAAGTTGTATACAAGTTATTGAAATCTTCTATTTAAGGCCAGCT  500

seq1  CCCATTTGAGCATGAGCCAGACCTGGACCCACATGTGCTATCAGAGCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTGAGCATGAGCCAGACCTGGACCCACATGTGCTATCAGAGCCTT  550

seq1  TTCCTTTATGAATCTGTAAGTGTACAAGAGTGATTTCTCACTGGAAAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTATGAATCTGTAAGTGTACAAGAGTGATTTCTCACTGGAAAGGA  600

seq1  ATATTATTTCTGTAACAAAATAAGCCAAACACAAAAAGACAAATGATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATTTCTGTAACAAAATAAGCCAAACACAAAAAGACAAATGATGAA  650

seq1  TGGCTGCATCTATCTGAGTTCCTGATATAGTTAAACTTGCAGAGGCAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCATCTATCTGAGTTCCTGATATAGTTAAACTTGCAGAGGCAGAG  700

seq1  GCGGCATGGCACTTATCTATCAGGGGACAGAAGGAAGGAAAATGGAGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCATGGCACTTATCTATCAGGGGACAGAAGGAAGGAAAATGGAGAGT  750

seq1  TAATGTCTAATGAGAATGCTTTTGCATTGGGAGTGAGGCAGCATAGAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCTAATGAGAATGCTTTTGCATTGGGAGTGAGGCAGCATAGAGAG  800

seq1  GCAGGGAAATGAAAAAGACACGGGAAGAGGAAGGACCACCTTACTGT-GG  849
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GCAGGGAAATGAAAAAGACACGGGAAGAGGAAGGACCACCTTACTGTGGG  850

seq1  GATCTGGCTGAGCAGCCAGAATTTCAACATAACTGAAACCA-GGACTACT  898
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GATCTGGCTGAGCAGCCAGAATTTCAACATAACTGAAACCAGGGACTACT  900

seq1  TAGAGACAGATAGACTATCCAAGAGATATCTCGAGGGTATTAAGAATAAC  948
      ||||||||||||||||||||||||||||||||||||||| |||| |||||
seq2  TAGAGACAGATAGACTATCCAAGAGATATCTCGAGGGTA-TAAGGATAAC  949

seq1  AGACCATGCCTAGTGAAGACCAGAGTGTCTTCGGCCTTCAGTTTACACTT  998
      ||||||||||||||| |||||||||||||||||| |||||| ||||||||
seq2  AGACCATGCCTAGTG-AGACCAGAGTGTCTTCGG-CTTCAGGTTACACTT  997

seq1  CTCCATCATCCATACACCTAAGCAATGCATCTCATAAAAACCACCTTGCA  1048
      || |||||||||||||||||||| |||||||||||||||| |  ||||| 
seq2  CT-CATCATCCATACACCTAAGC-ATGCATCTCATAAAAATCCACTTGC-  1044

seq1  ATGTCATTCATGAAAGGAAATCACTAAAGAAAAATGGGCCTAGCAGTTCA  1098
      ||||||||||||||||| ||||||||||| |||||||||||||||| |||
seq2  ATGTCATTCATGAAAGGGAATCACTAAAG-AAAATGGGCCTAGCAGGTCA  1093

seq1  TGTACATTTT--TACTT  1113
      ||||||||||  |||||
seq2  TGTACATTTTACTACTT  1110

seq1: chr1_134751920_134752454
seq2: B6Ng01-106K15.g_65_599 (reverse)

seq1  CCTTCAGTCTCACACACACACACACACACACACACACACACACACACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGTCTCACACACACACACACACACACACACACACACACACACATT  50

seq1  TTTTTTCTTACCAACATGAGGAGAGAAGGAGAAGGCACCAAGCTGTAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTACCAACATGAGGAGAGAAGGAGAAGGCACCAAGCTGTAGAA  100

seq1  GCAGAACTTCCTTTTCAGGTGGCTCCCTGGAGGATTCATTTACATATTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAACTTCCTTTTCAGGTGGCTCCCTGGAGGATTCATTTACATATTAA  150

seq1  CCGATCTGTCTGGGATGGGGAAAGAGGTTCAGCAGTTCGGAGCCCAGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGATCTGTCTGGGATGGGGAAAGAGGTTCAGCAGTTCGGAGCCCAGGCT  200

seq1  TCACTTCCAAAGGACCTGAGTTCCCTTCACCCACATGATGGCTCACAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCCAAAGGACCTGAGTTCCCTTCACCCACATGATGGCTCACAACT  250

seq1  GTCTGTAACTCCAGTTCCAGGTCATCTGACTCCCTCTGCCTGCCTCTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTAACTCCAGTTCCAGGTCATCTGACTCCCTCTGCCTGCCTCTGTG  300

seq1  GGTGCTGGATTCAACAGTGCACAACAATCCATCCAAGCAAACACTCATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGGATTCAACAGTGCACAACAATCCATCCAAGCAAACACTCATGC  350

seq1  CCATAAAGTAAAAATAAAGGAAAGCAATTAAAAACAGAAGATCTGTGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAAGTAAAAATAAAGGAAAGCAATTAAAAACAGAAGATCTGTGAAG  400

seq1  ACTGTGCCCTAAGCTGGTGAAGTATGCTGCACTAGCTGTCTTTCACTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGCCCTAAGCTGGTGAAGTATGCTGCACTAGCTGTCTTTCACTGTT  450

seq1  TTCTATATCTCATCTATGCCTCTGACAGAAAGAACTGGCTATTGGCATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATATCTCATCTATGCCTCTGACAGAAAGAACTGGCTATTGGCATAA  500

seq1  CTGTCCCCCATATTCTTAAGTTCATCCAAGAATTC  535
      |||||||||||||||||||||||||||||||||||
seq2  CTGTCCCCCATATTCTTAAGTTCATCCAAGAATTC  535