BAC Information

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BAC

Clone NameB6Ng01-107C02
Chromosome1 (Build37)
Map Location 64,094,929 - 64,223,495
singlet/doubletdoublet
Overlap geneKlf7, Ppia-ps1_583.1
Upstream geneA430093A21Rik, Ndufs1, Eef1b2, Gpr1, 1700039I01Rik, 4930431J08Rik, LOC667644, LOC100042638, Adam23, Gm215, Mdh1b, Fastkd2, 4933402D24Rik, LOC671842, OTTMUSG00000013918
Downstream geneLOC100043124, Creb1, 2310038H17Rik, Ccnyl1, Fzd5, 9430067K14Rik, LOC667245, LOC100043141, 4921521F21Rik, LOC667276, Cryge, Crygd, Crygc, Crygb, LOC654356, Cryga, D630023F18Rik, Idh1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107C02.bB6Ng01-107C02.g
ACCDH914684DH914685
length1,225742
definitionDH914684|Mus musculus domesticus DNA, BAC clone: B6Ng01-107C02, 5' end.DH914685|Mus musculus domesticus DNA, BAC clone: B6Ng01-107C02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,094,929 - 64,096,183)(64,222,754 - 64,223,495)
sequence
gaattctaatcccttgctgctgtaagaggtaaaacttgcttggcctttta
aatctgacattcctcttgaacatgtgctcctctacgatgtattccttcac
tagcaggggtcacttccatctcttccctatctctcagggcctaaagaatg
aaggtcctgaccatctctatctcacacctaaggatccaggtctcctgagc
aactgccccctggaaagcatcaatttatgaagcccattttaaaaggctgc
ctctggactggactagagagcatccctggtggagcagatgcactgagctt
caagttcacctttaagatacagatggtaccatgaaataggagcatgaagc
aggatcctgcactcagggatttttttttttaaagaaacatgtaaatgagc
attgtgcatgcaaatactctaaatccacttcctgatctgcaaaaaacgtc
atttctaacccacgtcttaaaaagaggagaactttgacgtggctagagta
ctgcataggttaatctgaatctttatttatttgcaatgtgattactaggc
atctggacatgtcaaggttagggtcctttcaggacttggattaagaacgt
ggaactctctcaggtgagaaggatagagaatccttacagtttccctttag
aagcaaccatcagccatttgcaaagacccagggaatgaatcgtagaggca
atgccacggagctcccaaatgccaggaagagaacaactagcaaacatccg
tccacaacctggcaatgctgagagctcagactataggtcctgcagttaaa
aagtgccaatgctgagttactgatggcttctgcagaaaactgtccagatt
tctctttgattctagctgtatcttaagtagtttctcttcttctccagtaa
aggcttagctgacagagagaaaagaagacaaaaactgtacttcctccaga
acattaaaagcatctgcaatagctaccacatataataaaagagcatctcc
actaatccccgtcccgcactgaccttctactcatccactatccctcacca
gccttcgcagtgccagaccaagccattgcatccacacaagcatgtatcca
tctcaggcagtcacaatattccatttttatcatccttcaacagcttaggc
aatgccagctggttatctgaactctctagcttgagtctcccatagtgtcc
aaaaaatacctgaaatcacattctc
gaattctctgtttacatctgtacccagagttttagttgggttatttgttt
tcttgatgtctagttttgttagcttcttatatattttatgtattagccct
ctatctgatgtgcagttggtaaacattgtcacaggggagtcagaatgttg
ttggataatcaaaagataattttttaattcaaactgctgtcaagcatagg
aagggagagacctggcctctgctcaccatgtgggacgtatacggctctgg
tgccctggtaatacatgaggcttcttcctctgcatcagctctggccttca
ggttcctgccctgcttggttttctgtcctcactgctttttataatgaact
gttacatggaactgtgaatgaaatacaccctttcctccccaagttgcttt
tggtcatggggtttcatcccagcaataaggacctaagacatatgctcaag
acattttttgctttgtggtttgtgtagtttcttttgagataggattcttt
cctgatggagaacgatttgcaaaagtagtaaatttttagattgataaaat
aaattaatgctaattataagaatcagaacgaaacaatcacatgacaagaa
ctggaatcacatgagagataaaattctgagcatatctgcaagggagactt
tagaatagcattataactgagataagaatatgccccagtacaggggaacg
ccagggcaaaaaaatgggaatgggtgggtaggggattcgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_64094929_64096183
seq2: B6Ng01-107C02.b_42_1266

seq1  GAATTCTAATCCCTTGCTGCTGTAAGAGGTAAAACTTGCTTGGCCTTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATCCCTTGCTGCTGTAAGAGGTAAAACTTGCTTGGCCTTTTA  50

seq1  AATCTGACATTCCTCTTGAACATGTGCTCCTCTACGATGTATTCCTTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGACATTCCTCTTGAACATGTGCTCCTCTACGATGTATTCCTTCAC  100

seq1  TAGCAGGGGTCACTTCCATCTCTTCCCTATCTCTCAGGGCCTAAAGAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGGGGTCACTTCCATCTCTTCCCTATCTCTCAGGGCCTAAAGAATG  150

seq1  AAGGTCCTGACCATCTCTATCTCACACCTAAGGATCCAGGTCTCCTGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCCTGACCATCTCTATCTCACACCTAAGGATCCAGGTCTCCTGAGC  200

seq1  AACTGCCCCCTGGAAAGCATCAATTTATGAAGCCCATTTTAAAAGGCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCCCCCTGGAAAGCATCAATTTATGAAGCCCATTTTAAAAGGCTGC  250

seq1  CTCTGGACTGGACTAGAGAGCATCCCTGGTGGAGCAGATGCACTGAGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGACTGGACTAGAGAGCATCCCTGGTGGAGCAGATGCACTGAGCTT  300

seq1  CAAGTTCACCTTTAAGATACAGATGGTACCATGAAATAGGAGCATGAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTCACCTTTAAGATACAGATGGTACCATGAAATAGGAGCATGAAGC  350

seq1  AGGATCCTGCACTCAGGGATTTTTTTTTTTAAAGAAACATGTAAATGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCCTGCACTCAGGGATTTTTTTTTTTAAAGAAACATGTAAATGAGC  400

seq1  ATTGTGCATGCAAATACTCTAAATCCACTTCCTGATCTGCAAAAAACGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGCATGCAAATACTCTAAATCCACTTCCTGATCTGCAAAAAACGTC  450

seq1  ATTTCTAACCCACGTCTTAAAAAGAGGAGAACTTTGACGTGGCTAGAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAACCCACGTCTTAAAAAGAGGAGAACTTTGACGTGGCTAGAGTA  500

seq1  CTGCATAGGTTAATCTGAATCTTTATTTATTTGCAATGTGATTACTAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATAGGTTAATCTGAATCTTTATTTATTTGCAATGTGATTACTAGGC  550

seq1  ATCTGGACATGTCAAGGTTAGGGTCCTTTCAGGACTTGGATTAAGAACGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGACATGTCAAGGTTAGGGTCCTTTCAGGACTTGGATTAAGAACGT  600

seq1  GGAACTCTCTCAGGTGAGAAGGATAGAGAATCCTTACAGTTTCCCTTTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTCTCTCAGGTGAGAAGGATAGAGAATCCTTACAGTTTCCCTTTAG  650

seq1  AAGCAACCATCAGCCATTTGCAAAGACCCAGGGAATGAATCGTAGAGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACCATCAGCCATTTGCAAAGACCCAGGGAATGAATCGTAGAGGCA  700

seq1  ATGCCACGGAGCTCCCAAATGCCAGGAAGAGAACAACTAGCAAACATCCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCACGGAGCTCCCAAATGCCAGGAAGAGAACAACTAGCAAACATCCG  750

seq1  TCCACAACCTGGCAATGCTGAGAGCTCAGACTATAGGTCCTGCAGTTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAACCTGGCAATGCTGAGAGCTCAGACTATAGGTCCTGCAGTTAAA  800

seq1  AAGTGCCAATGCTGAGTTACTGATGGCTTCTGCAGAAAACTGTCCAGATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCCAATGCTGAGTTACTGATGGCTTCTGCAGAAAACTGTCCAGATT  850

seq1  TCTCTTTGATTCTAGCTGTATCTTAAGTAGTTTCTCTTCTTCTCCAGTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTGATTCTAGCTGTATCTTAAGTAGTTTCTCTTCTTCTCCAGTAA  900

seq1  AGGCTTAGCTGACAGAGAGAAAAGAAGACAAAAACTGTACTT-CTCCAGA  949
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGGCTTAGCTGACAGAGAGAAAAGAAGACAAAAACTGTACTTCCTCCAGA  950

seq1  ACATTAAAAGCATCTGCAATAGCTACCACATATAAT-AAAGAGCATCTCC  998
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACATTAAAAGCATCTGCAATAGCTACCACATATAATAAAAGAGCATCTCC  1000

seq1  ACTAATCCCCGTCCCGCACTGACCTTCTACTCATCCACTATTCCCTCACC  1048
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACTAATCCCCGTCCCGCACTGACCTTCTACTCATCCACTA-TCCCTCACC  1049

seq1  AAGGCCTCGCAGGTGCCAGGACCAAAGCCATTGCATTCACACAAAGCATG  1098
       || | ||||| |||||| |||| |||||||||||| ||||| |||||||
seq2  -AGCCTTCGCA-GTGCCA-GACC-AAGCCATTGCATCCACAC-AAGCATG  1094

seq1  TATCCATTCTTCAGGGCAAGTCACTATATATTCCATTTTTTAATTCATTC  1148
      |||||||   |||||   ||||||   |||||||||||||    |||| |
seq2  TATCCAT--CTCAGG--CAGTCAC--AATATTCCATTTTT---ATCATCC  1135

seq1  TTCAAACAGCTTTAAGGCGATGGCCAGCTTGGGTTATCTGAACTCTTCAT  1198
      ||| ||||||||  |||| || |||||||  |||||||||||||||   |
seq2  TTC-AACAGCTT--AGGCAAT-GCCAGCT--GGTTATCTGAACTCT--CT  1177

seq1  AGCCTTGGATGTCTTCACAATAGTTGTTCAAAAATAAATAACTGAAATCA  1248
      || ||||  | ||    | |||| ||| ||||   ||||| |||||||||
seq2  AG-CTTGAGTCTC----CCATAG-TGTCCAAA---AAATACCTGAAATCA  1218

seq1  CATTCTC  1255
      |||||||
seq2  CATTCTC  1225

seq1: chr1_64222754_64223495
seq2: B6Ng01-107C02.g_66_807 (reverse)

seq1  CCCCGAATCCCCTACCCACCCATTCCCATTTTTTTGCCCTGGCGTTCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGAATCCCCTACCCACCCATTCCCATTTTTTTGCCCTGGCGTTCCCC  50

seq1  TGTACTGGGGCATATTCTTATCTCAGTTATAATGCTATTCTAAAGTCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGGGGCATATTCTTATCTCAGTTATAATGCTATTCTAAAGTCTCC  100

seq1  CTTGCAGATATGCTCAGAATTTTATCTCTCATGTGATTCCAGTTCTTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGATATGCTCAGAATTTTATCTCTCATGTGATTCCAGTTCTTGTC  150

seq1  ATGTGATTGTTTCGTTCTGATTCTTATAATTAGCATTAATTTATTTTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATTGTTTCGTTCTGATTCTTATAATTAGCATTAATTTATTTTATC  200

seq1  AATCTAAAAATTTACTACTTTTGCAAATCGTTCTCCATCAGGAAAGAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAAAAATTTACTACTTTTGCAAATCGTTCTCCATCAGGAAAGAATC  250

seq1  CTATCTCAAAAGAAACTACACAAACCACAAAGCAAAAAATGTCTTGAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTCAAAAGAAACTACACAAACCACAAAGCAAAAAATGTCTTGAGCA  300

seq1  TATGTCTTAGGTCCTTATTGCTGGGATGAAACCCCATGACCAAAAGCAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTTAGGTCCTTATTGCTGGGATGAAACCCCATGACCAAAAGCAAC  350

seq1  TTGGGGAGGAAAGGGTGTATTTCATTCACAGTTCCATGTAACAGTTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGAGGAAAGGGTGTATTTCATTCACAGTTCCATGTAACAGTTCATT  400

seq1  ATAAAAAGCAGTGAGGACAGAAAACCAAGCAGGGCAGGAACCTGAAGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAGCAGTGAGGACAGAAAACCAAGCAGGGCAGGAACCTGAAGGCC  450

seq1  AGAGCTGATGCAGAGGAAGAAGCCTCATGTATTACCAGGGCACCAGAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGATGCAGAGGAAGAAGCCTCATGTATTACCAGGGCACCAGAGCC  500

seq1  GTATACGTCCCACATGGTGAGCAGAGGCCAGGTCTCTCCCTTCCTATGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACGTCCCACATGGTGAGCAGAGGCCAGGTCTCTCCCTTCCTATGCT  550

seq1  TGACAGCAGTTTGAATTAAAAAATTATCTTTTGATTATCCAACAACATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGCAGTTTGAATTAAAAAATTATCTTTTGATTATCCAACAACATTC  600

seq1  TGACTCCCCTGTGACAATGTTTACCAACTGCACATCAGATAGAGGGCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCCCCTGTGACAATGTTTACCAACTGCACATCAGATAGAGGGCTAA  650

seq1  TACATAAAATATATAAGAAGCTAACAAAACTAGACATCAAGAAAACAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAAATATATAAGAAGCTAACAAAACTAGACATCAAGAAAACAAAT  700

seq1  AACCCAACTAAAACTCTGGGTACAGATGTAAACAGAGAATTC  742
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAACTAAAACTCTGGGTACAGATGTAAACAGAGAATTC  742