BAC Information

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BAC

Clone NameB6Ng01-110L03
Chromosome1 (Build37)
Map Location 110,269,159 - 110,424,410
singlet/doubletdoublet
Overlap geneLOC435640
Upstream geneSerpinb11, Serpinb7, Serpinb2, Serpinb10, Serpinb8
Downstream geneEG626474
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110L03.bB6Ng01-110L03.g
ACCDH917246DH917247
length1,1141,153
definitionDH917246|Mus musculus domesticus DNA, BAC clone: B6Ng01-110L03, 5' end.DH917247|Mus musculus domesticus DNA, BAC clone: B6Ng01-110L03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,269,159 - 110,270,284)(110,423,242 - 110,424,410)
sequence
gaattctcatcagaggtcagatgtttttaatgactgcacaagacttcatg
tttgctttcacaaagccatgacttcttttgaacctttatattgttagaga
attttatacatacaagttttgataaaatctaccacttcatttatgtttgt
tcagcttttatcacaacctatccaccccaaatttatgtgctgtgttgttt
aaactcatcatgtcttttttgtgccatcagtatgtgcgtgaatgtaaagt
gatctgctatatcatgggtattttttgagtttctgcatctctgaagaaca
ttttataaattcttgtacttcttatggagatctgaaataaccaatgacaa
ggttacttctcctgtaactccggtaagaacaggtgacctttagtccttgt
ttcactagactacatcatctggagtcatcatcttaaaatagctctccagc
tggttgtgggatttggaagtcaatcatccattcatgtttggatactggct
aaattgaccttgcataggtcttgtgtgtcactccctctgtgagctcatgg
atgcaaggactttgccatgtctcaaaaatattgatttgctgtagtcattc
agtaccccagtatcttatgatatttaagaactctcataagagatgaacct
tgatccttgagaaggtgagtataatatagtagatctatttaaaaaggaac
ctcaaagtctctgatgttaggcatcataatatctctgtatcagtcacaac
ctattgcaaaaagaagctttttatgatgaaggttataactgtgagtgcat
aaataagtacatatgtggttatctgatattgtgtctatttagcagaataa
tagtaacatattcatctctagttcctataatatagagttctcattacatc
tttcataactccatcttcatcacttgaagtctgaaaaattattttatttt
atattaatgtatacattaataaagcttatgttattgagttagcagagtta
caggatctagatcagaaataaagatagttattgcttgaaacataatacaa
tatttgtctcatattgagctcagatgctagaagcaaatgtgatcaagaat
agagcatgtctttc
gaattctaaaaaggccatttgctcaattaatttatcccttgaaatgtaaa
aaataagttatattatactaagtctcatattaattaggccaattacaggg
ccaatggaggcataagaaaagttaccatctgtgcattactagcaacgagg
acactaattttgtttgtggagtcaacagaaaaatcatgccagatttccct
gatggttgtgagagattacatgaataatgggactctaaaattaacctaag
agttaccagcaggcacaagctcttccaacctgtcagtcaatattgaggtt
ttctgaataaactacctcctctgagtaaatccattcatttggacatttca
ttgcttttttttttttttaactgcatctaaagtgctttcatatggcacac
gggtcattagtgccacttttctttttcctcttcattgtaccaaaacctca
aacctttaaaaaaaattaaaaattagagtctatttctttaaaattggaag
gtttagcaaagtacactgcaacaagattgagaagtcttgaataaacatta
ggaggagtggaatgtgattgatacctagcatattacataaaaattatgtc
ctcactattattaactgaggtcaaataaaactgagcataaatagctgttt
gagttgatgaaaaatggaaacatttattttcttttctaaatgtttttatt
ggcaataattcaaaagactaaaatttcaacaaagtgacaacaagaaattt
gagaaaatattaaactgttttatcgaattcctccattggtaatcttttgc
ccagatatgaatgacacagtctggttaatccagaaatctggtgatgccag
ctaaatgttgtctcaatcatttatcataaagcaaagatgtcttttgaaat
tccatttattgtagatgtaaatcggttcagttccaagctgtgtctaaatc
atatgaccatttgttttgccagtaagtcccaagcccttcatactactgca
agatcctcagaagattcttcaatggctaatgtctctatgacctctgaaac
ttttctaactcctgagaatttgagaatctgatgaaagttgtctccttttt
tatctgataatgcctgaactctcttttagtctggctggaaatgtcttcca
aga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_110269159_110270284
seq2: B6Ng01-110L03.b_45_1158

seq1  GAATTCTCATCAGAGGTCAGATGTTTTTAATGACTGCACAAGACTTCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATCAGAGGTCAGATGTTTTTAATGACTGCACAAGACTTCATG  50

seq1  TTTGCTTTCACAAAGCCATGACTTCTTTTGAACCTTTATATTGTTAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTCACAAAGCCATGACTTCTTTTGAACCTTTATATTGTTAGAGA  100

seq1  ATTTTATACATACAAGTTTTGATAAAATCTACCACTTCATTTATGTTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATACATACAAGTTTTGATAAAATCTACCACTTCATTTATGTTTGT  150

seq1  TCAGCTTTTATCACAACCTATCCACCCCAAATTTATGTGCTGTGTTGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTTTATCACAACCTATCCACCCCAAATTTATGTGCTGTGTTGTTT  200

seq1  AAACTCATCATGTCTTTTTTGTGCCATCAGTATGTGCGTGAATGTAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCATCATGTCTTTTTTGTGCCATCAGTATGTGCGTGAATGTAAAGT  250

seq1  GATCTGCTATATCATGGGTATTTTTTGAGTTTCTGCATCTCTGAAGAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCTATATCATGGGTATTTTTTGAGTTTCTGCATCTCTGAAGAACA  300

seq1  TTTTATAAATTCTTGTACTTCTTATGGAGATCTGAAATAACCAATGACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAAATTCTTGTACTTCTTATGGAGATCTGAAATAACCAATGACAA  350

seq1  GGTTACTTCTCCTGTAACTCCGGTAAGAACAGGTGACCTTTAGTCCTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACTTCTCCTGTAACTCCGGTAAGAACAGGTGACCTTTAGTCCTTGT  400

seq1  TTCACTAGACTACATCATCTGGAGTCATCATCTTAAAATAGCTCTCCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTAGACTACATCATCTGGAGTCATCATCTTAAAATAGCTCTCCAGC  450

seq1  TGGTTGTGGGATTTGGAAGTCAATCATCCATTCATGTTTGGATACTGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTGGGATTTGGAAGTCAATCATCCATTCATGTTTGGATACTGGCT  500

seq1  AAATTGACCTTGCATAGGTCTTGTGTGTCACTCCCTCTGTGAGCTCATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGACCTTGCATAGGTCTTGTGTGTCACTCCCTCTGTGAGCTCATGG  550

seq1  ATGCAAGGACTTTGCCATGTCTCAAAAATATTGATTTGCTGTAGTCATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAGGACTTTGCCATGTCTCAAAAATATTGATTTGCTGTAGTCATTC  600

seq1  AGTACCCCAGTATCTTATGATATTTAAGAACTCTCATAAGAGATGAACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCCCAGTATCTTATGATATTTAAGAACTCTCATAAGAGATGAACCT  650

seq1  TGATCCTTGAGAAGGTGAGTATAATATAGTAGATCTATTTAAAAAGGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCTTGAGAAGGTGAGTATAATATAGTAGATCTATTTAAAAAGGAAC  700

seq1  CTCAAAGTCTCTGATGTTAGGCATCATAATATCTCTGTATCAGTCACAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGTCTCTGATGTTAGGCATCATAATATCTCTGTATCAGTCACAAC  750

seq1  CTATTGCAAAAAGAAGCTTTTTATGATGAAGGTTATAACTGTGAGTGCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGCAAAAAGAAGCTTTTTATGATGAAGGTTATAACTGTGAGTGCAT  800

seq1  AAATAAGTACATATGTGGTTATCTGATATTGTGTCTATTTAGCAGAATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGTACATATGTGGTTATCTGATATTGTGTCTATTTAGCAGAATAA  850

seq1  TAGTAACATATTCATCTCTAGTTCCTATAATATAGAGTTCTCATTACATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAACATATTCATCTCTAGTTCCTATAATATAGAGTTCTCATTACATC  900

seq1  TTTCATAACTCCATCTTCATCACTTGAAGTCTGAAAAAATTATTTTATTT  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTTCATAACTCCATCTTCATCACTTGAAGTCTG-AAAAATTATTTTATTT  949

seq1  TATATTAATGTATACAATTAATAAAGCCTTATGTTATTGAGGTTAGCAGA  1000
      ||||||||||||||| |||||||||| ||||||||||||| |||||||| 
seq2  TATATTAATGTATAC-ATTAATAAAG-CTTATGTTATTGA-GTTAGCAG-  995

seq1  AGTTACAGGATCTAGATCAGAAAATAAAAGATAGTTTATTGCTTGAAAAC  1050
      |||||||||||||||||||||||   |||||||| |||||||||| ||||
seq2  AGTTACAGGATCTAGATCAGAAA--TAAAGATAG-TTATTGCTTG-AAAC  1041

seq1  ATAATACAATATTTGTCTCCATAATTGAGGCTCAGATGCTAGAAGCAAAT  1100
      |||||||||||||||||| ||| ||||| |||||||||||||||||||||
seq2  ATAATACAATATTTGTCT-CAT-ATTGA-GCTCAGATGCTAGAAGCAAAT  1088

seq1  GTGATCAAGAATAGAGCATGTCTTTC  1126
      ||||||||||||||||||||||||||
seq2  GTGATCAAGAATAGAGCATGTCTTTC  1114

seq1: chr1_110423242_110424410
seq2: B6Ng01-110L03.g_66_1218 (reverse)

seq1  TCTTGTGAAGACATGTCTCAGCCAGCATAAAAGAGAATGGTTCAAAGCAT  50
      ||||| |||||||| || |||||||  |||||||||   |||| | ||| 
seq2  TCTTG-GAAGACATTTC-CAGCCAGACTAAAAGAGA---GTTC-AGGCA-  43

seq1  TTATCAGATAAAAAAGGAGACAAC-TTCATCAGATACCCCAAATTCTCA-  98
      |||||||||||||||||||||||| ||||||||||  | |||||||||| 
seq2  TTATCAGATAAAAAAGGAGACAACTTTCATCAGAT-TCTCAAATTCTCAG  92

seq1  GAGTTAAGAAAAGTTTCAGAGGTCATAGAGAACATTAAGCCACTGAAGAA  148
      ||||| |||||||||||||||||||||||| ||||| ||||| |||||||
seq2  GAGTT-AGAAAAGTTTCAGAGGTCATAGAG-ACATT-AGCCATTGAAGAA  139

seq1  TCTTCTGA-GATCTTGCAGTAGGTATTGAAGGGCTTGGGACTTACTGGCA  197
      |||||||| |||||||||||| ||| ||||||||||||||||||||||| 
seq2  TCTTCTGAGGATCTTGCAGTA-GTA-TGAAGGGCTTGGGACTTACTGGC-  186

seq1  AAAACAAATGGTTCAATATGATTTTAGACAACAGCTTGGAACTGAACCGA  247
      ||||||||||||   |||||| ||||||| ||||||||||||||||||||
seq2  AAAACAAATGGT--CATATGA-TTTAGAC-ACAGCTTGGAACTGAACCGA  232

seq1  TTTACATCTACAATAAATGGAATTTCAAAAGACATCTTTTGCTTTATGAT  297
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTTACATCTACAATAAATGGAATTTCAAAAGACATC-TTTGCTTTATGAT  281

seq1  AAATGATTGAGACAACATTTAGCTGGCATCACCAGATTTCTGGATTAACC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATTGAGACAACATTTAGCTGGCATCACCAGATTTCTGGATTAACC  331

seq1  AGACTGTGTCATTCATATCTGGGCAAAAGATTACCAATGGAGGAATTCGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTGTCATTCATATCTGGGCAAAAGATTACCAATGGAGGAATTCGA  381

seq1  TAAAACAGTTTAATATTTTCTCAAATTTCTTGTTGTCACTTTGTTGAAAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAGTTTAATATTTTCTCAAATTTCTTGTTGTCACTTTGTTGAAAT  431

seq1  TTTAGTCTTTTGAATTATTGCCAATAAAAACATTTAGAAAAGAAAATAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTCTTTTGAATTATTGCCAATAAAAACATTTAGAAAAGAAAATAAA  481

seq1  TGTTTCCATTTTTCATCAACTCAAACAGCTATTTATGCTCAGTTTTATTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCATTTTTCATCAACTCAAACAGCTATTTATGCTCAGTTTTATTT  531

seq1  GACCTCAGTTAATAATAGTGAGGACATAATTTTTATGTAATATGCTAGGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCAGTTAATAATAGTGAGGACATAATTTTTATGTAATATGCTAGGT  581

seq1  ATCAATCACATTCCACTCCTCCTAATGTTTATTCAAGACTTCTCAATCTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATCACATTCCACTCCTCCTAATGTTTATTCAAGACTTCTCAATCTT  631

seq1  GTTGCAGTGTACTTTGCTAAACCTTCCAATTTTAAAGAAATAGACTCTAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAGTGTACTTTGCTAAACCTTCCAATTTTAAAGAAATAGACTCTAA  681

seq1  TTTTTAATTTTTTTTAAAGGTTTGAGGTTTTGGTACAATGAAGAGGAAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATTTTTTTTAAAGGTTTGAGGTTTTGGTACAATGAAGAGGAAAA  731

seq1  AGAAAAGTGGCACTAATGACCCGTGTGCCATATGAAAGCACTTTAGATGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGTGGCACTAATGACCCGTGTGCCATATGAAAGCACTTTAGATGC  781

seq1  AGTTAAAAAAAAAAAAAAGCAATGAAATGTCCAAATGAATGGATTTACTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAAAAAAAAAAAAAGCAATGAAATGTCCAAATGAATGGATTTACTC  831

seq1  AGAGGAGGTAGTTTATTCAGAAAACCTCAATATTGACTGACAGGTTGGAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGGTAGTTTATTCAGAAAACCTCAATATTGACTGACAGGTTGGAA  881

seq1  GAGCTTGTGCCTGCTGGTAACTCTTAGGTTAATTTTAGAGTCCCATTATT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTGTGCCTGCTGGTAACTCTTAGGTTAATTTTAGAGTCCCATTATT  931

seq1  CATGTAATCTCTCACAACCATCAGGGAAATCTGGCATGATTTTTCTGTTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAATCTCTCACAACCATCAGGGAAATCTGGCATGATTTTTCTGTTG  981

seq1  ACTCCACAAACAAAATTAGTGTCCTCGTTGCTAGTAATGCACAGATGGTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCACAAACAAAATTAGTGTCCTCGTTGCTAGTAATGCACAGATGGTA  1031

seq1  ACTTTTCTTATGCCTCCATTGGCCCTGTAATTGGCCTAATTAATATGAGA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTCTTATGCCTCCATTGGCCCTGTAATTGGCCTAATTAATATGAGA  1081

seq1  CTTAGTATAATATAACTTATTTTTTACATTTCAAGGGATAAATTAATTGA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTATAATATAACTTATTTTTTACATTTCAAGGGATAAATTAATTGA  1131

seq1  GCAAATGGCCTTTTTAGAATTC  1169
      ||||||||||||||||||||||
seq2  GCAAATGGCCTTTTTAGAATTC  1153