BAC Information

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BAC

Clone NameB6Ng01-111N12
Chromosome1 (Build37)
Map Location 106,463,226 - 106,464,481
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383546
Downstream geneLOC100041134, Cdh20, Rnf152, LOC100041985, Pign
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111N12.bB6Ng01-111N12.g
ACCDH918074DH918075
length1,227652
definitionDH918074|Mus musculus domesticus DNA, BAC clone: B6Ng01-111N12, 5' end.DH918075|Mus musculus domesticus DNA, BAC clone: B6Ng01-111N12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacttctgcactttgacaggcatactttgagttatttgaggtgac
aaaggtaatgatttagcagtgacatttcactgtctgttaaaagaaaagat
ggcactgctgtcacatgatttagccatgatagaggtgcagccttttgaag
atattgacagaaaatgtcccataataaattcaaaagccagcagagctgca
ttacgtttggccatatattacaggcactggtttgttataactaagatatg
ttgctgtctttgtgtaattttgagatactacaacccacatgtcatatatt
tttatcatcctgacagttattagcaaatattgaaagctcatttgtttttt
cttcaaatgaagctatagaatattaatttcagcttaaaaattatttttct
ctctccagaaggatgaaagccaattatgagaaactacatttctgcttaaa
tatttttcttcatgaaaattaaagctatttcagaattttgcaagaggggt
gggatgaagtaccaggagggaatgcaatactgaatcaaataaaatgtatt
gtttcttgtatggtaagagagataagccaatttttgcaacaattattctg
gttgatttcaaatttacactgtagatactcaatataattctgattcttat
tttcctaaaagcatagataaatatcagtaaatagaggatccattccattg
gaaaatgtgctcttgtcaatgttaattctagggctaagattgttttaaaa
gcaatatgaaatcatattcctcttaaagcacttctcttataatgtataga
atatactaggatctaatctttcccaacaccctggtacctatgaattcaga
tgatggaaaggacacaaatacaagattactggatatttataaagtattcc
atccacttaaacttcatcacatcactaagtgatacatgatccaatctgga
gccagataattcctactgagcatcataagtctcctaactctttcttcatt
tgtcctctatgacctgcttctacaaacaaagattgctagcataaactcat
ttgggtgttcctaatctgtgatatcccatgattacttgacttgttgcctt
cattaaaaaaatgatcctctcctcccataatatatccctggatatggtcc
cctattcatcctcacctgttcacctaccctccaccttttctgcctcttta
gaaaagagtgagttccaatgcgctaat

gaattctgcacaaaagccatctggtcctggattttttttttggtagtggg
gaggcttttaattgaggttcctaccttctttttgggttacagggctattt
aaaacgtttatctgatcttgatttaactttggtaagtggtatgtctctag
gaaactaaccatttcattaagctttttcattttgggggagtataggcttt
tgaagtaagaactaatgattctttgaatttcctccatgtcagtgcttatg
tctcccttttcaatactgatttgtttatttggatactatctctctgtctc
ttggttagtttgatctatcttgttgattttcggggggggtattgtcattc
tttggttgttttgtttgtcacttactgatttcaaccatgatttttactac
ttcctgagttctattcctctttggtgtgcttacttatttccctagagctt
tcaggtgtactttaaattactggtatgataccaccccccccccccccaga
actcatgtttctagctgcatatgtatcaaatgatggcctagtcggccatc
attggaaagagagccccatcagtctggcaaactttatatgtctcagtaca
ggggaacgaatgccagggccaagaagtgggagtgggtggatatggaggtg
gg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_106463226_106464481
seq2: B6Ng01-111N12.b_50_1276

seq1  GAATTCACTTCTGCACTTTGACAGGCATACTTTGAGTTATTTGAGGTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTCTGCACTTTGACAGGCATACTTTGAGTTATTTGAGGTGAC  50

seq1  AAAGGTAATGATTTAGCAGTGACATTTCACTGTCTGTTAAAAGAAAAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTAATGATTTAGCAGTGACATTTCACTGTCTGTTAAAAGAAAAGAT  100

seq1  GGCACTGCTGTCACATGATTTAGCCATGATAGAGGTGCAGCCTTTTGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTGCTGTCACATGATTTAGCCATGATAGAGGTGCAGCCTTTTGAAG  150

seq1  ATATTGACAGAAAATGTCCCATAATAAATTCAAAAGCCAGCAGAGCTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGACAGAAAATGTCCCATAATAAATTCAAAAGCCAGCAGAGCTGCA  200

seq1  TTACGTTTGGCCATATATTACAGGCACTGGTTTGTTATAACTAAGATATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGTTTGGCCATATATTACAGGCACTGGTTTGTTATAACTAAGATATG  250

seq1  TTGCTGTCTTTGTGTAATTTTGAGATACTACAACCCACATGTCATATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTCTTTGTGTAATTTTGAGATACTACAACCCACATGTCATATATT  300

seq1  TTTATCATCCTGACAGTTATTAGCAAATATTGAAAGCTCATTTGTTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCATCCTGACAGTTATTAGCAAATATTGAAAGCTCATTTGTTTTTT  350

seq1  CTTCAAATGAAGCTATAGAATATTAATTTCAGCTTAAAAATTATTTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAATGAAGCTATAGAATATTAATTTCAGCTTAAAAATTATTTTTCT  400

seq1  CTCTCCAGAAGGATGAAAGCCAATTATGAGAAACTACATTTCTGCTTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGAAGGATGAAAGCCAATTATGAGAAACTACATTTCTGCTTAAA  450

seq1  TATTTTTCTTCATGAAAATTAAAGCTATTTCAGAATTTTGCAAGAGGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCTTCATGAAAATTAAAGCTATTTCAGAATTTTGCAAGAGGGGT  500

seq1  GGGATGAAGTACCAGGAGGGAATGCAATACTGAATCAAATAAAATGTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGAAGTACCAGGAGGGAATGCAATACTGAATCAAATAAAATGTATT  550

seq1  GTTTCTTGTATGGTAAGAGAGATAAGCCAATTTTTGCAACAATTATTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTGTATGGTAAGAGAGATAAGCCAATTTTTGCAACAATTATTCTG  600

seq1  GTTGATTTCAAATTTACACTGTAGATACTCAATATAATTCTGATTCTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATTTCAAATTTACACTGTAGATACTCAATATAATTCTGATTCTTAT  650

seq1  TTTCCTAAAAGCATAGATAAATATCAGTAAATAGAGGATCCATTCCATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTAAAAGCATAGATAAATATCAGTAAATAGAGGATCCATTCCATTG  700

seq1  GAAAATGTGCTCTTGTCAATGTTAATTCTAGGGCTAAGATTGTTTTAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGTGCTCTTGTCAATGTTAATTCTAGGGCTAAGATTGTTTTAAAA  750

seq1  GCAATATGAAATCATATTCCTCTTAAAGCACTTCTCTTATAATGTATAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATATGAAATCATATTCCTCTTAAAGCACTTCTCTTATAATGTATAGA  800

seq1  ATATACTAGGATCTAATCTTTCCCAACACCCTGGTACCTATGAATTCAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTAGGATCTAATCTTTCCCAACACCCTGGTACCTATGAATTCAGA  850

seq1  TGATGGAAAGGACACAAAATACAAGATTACTGGATATTTATAAAGTATTC  900
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGATGGAAAGGACAC-AAATACAAGATTACTGGATATTTATAAAGTATTC  899

seq1  CATCCACTTAAACTTCATCACATCACTAAGTGATACATGATCCAATCTGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCACTTAAACTTCATCACATCACTAAGTGATACATGATCCAATCTGG  949

seq1  AGCCAGATAATTCCTTACTGAGCATTCATAAGTCTTCCTAACTCTTTCTT  1000
      |||||||||||||| ||||||||| ||||||||| |||||||||||||||
seq2  AGCCAGATAATTCC-TACTGAGCA-TCATAAGTC-TCCTAACTCTTTCTT  996

seq1  CATTTGTTCCTTCTATGACCTTGCTTTCTACAAACAAAAGATTGCTAGCA  1050
      |||||||  | ||||||||| ||| |||||||||| ||||||||||||||
seq2  CATTTGT--CCTCTATGACC-TGC-TTCTACAAAC-AAAGATTGCTAGCA  1041

seq1  TAAACTCATTTTGTGTTGTTTCTATATCTGTTGATATTCCATGATTTACT  1100
      |||||||||||   | |||| ||| ||||| |||||| |||||| |||| 
seq2  TAAACTCATTT--GGGTGTTCCTA-ATCTG-TGATATCCCATGA-TTAC-  1085

seq1  TTTGACTTTGTTTGCCTTTCATTAAAAAAAAATGGATTCTTCTCTCCTAT  1150
       |||||||   ||||| |||||||||||||    ||| ||   |||| ||
seq2  -TTGACTT--GTTGCC-TTCATTAAAAAAA---TGATCCTCTCCTCCCAT  1128

seq1  AATATATCC--TGATATGGTTTCCTCTATTTCTACTCTACCCTGTTTCAC  1198
      |||||||||   |||||||  ||| |||||  | |||   |||| |||||
seq2  AATATATCCCTGGATATGG--TCCCCTATTCATCCTC--ACCTG-TTCAC  1173

seq1  TCTA-CCTCCACTCTTTTTCTGTCTCTTAATAGAAAAGAGTAGAGTTACA  1247
       ||| ||||||  | ||||||| |||||  ||||||||||| ||||| ||
seq2  -CTACCCTCCA--CCTTTTCTGCCTCTT--TAGAAAAGAGT-GAGTTCCA  1217

seq1  AT-AGCTAAT  1256
      ||  ||||||
seq2  ATGCGCTAAT  1227


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