BAC Information

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BAC

Clone NameB6Ng01-113E03
Chromosome1 (Build37)
Map Location 47,392,807 - 47,554,075
singlet/doubletdoublet
Overlap geneEG227061
Upstream geneDnahc7b, LOC666855, Slc39a10
Downstream geneLOC666869, LOC546734, LOC674566
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113E03.bB6Ng01-113E03.g
ACCDH919098DH919099
length1,087225
definitionDH919098|Mus musculus domesticus DNA, BAC clone: B6Ng01-113E03, 5' end.DH919099|Mus musculus domesticus DNA, BAC clone: B6Ng01-113E03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,552,985 - 47,554,075)(47,392,807 - 47,393,026)
sequence
gaattctcatctaattttccacactatcctctcacaatagactgatattt
tcaaagactatcattaacatagataactaatcacagatagttattgccag
acttagaggctcatctttgtagtcccagcacttaagtgtctgaggcaaaa
agattattaagaatttgaacctactttggtctatacagtcaattccaggc
cagctaaagatatagattaggccctatctttaaagacatgaagcaaaaat
ataatgactttatattacttgtatatattaatgcggttcaataggcacca
cacatttgtctgcatgaagagggtgtccatttatcagccttcatcttctc
gattttcctttccaacatccattctgatccatagtcatcatgactgtact
tacactttggctttcctttaagtctaacatttaggggaaatatgcaattc
atttttgtgtgtcttccttatttcacttaatacagtttcctccatttctt
tcccaattccagtattttattcttatttattatctaatgtatatgaatat
atattatatatgtatatataatatatatatcatatatcgcattttcttta
accacgcttatattgatgatagctgatgatagctacatggtagctgaaca
gtgacagtaaatgcagatatgcaagtatttttagtttttttatgtacaca
ttcagaagttgtatgggtggatcatatggtgatcaattctaacttttgga
gaacatgcccaagatatcacacaaaacatcttataagaccctgtctactg
acaggctgtgcctgtggaatatacacttctaggaaacagttaataaagca
gatcaggtactgaactcataccttctacttgtgacatttctcattcttac
taaccactttcctatcctaacagcttttcattcccaagaagcacacgtcc
ttcacttatattgaacacacctagccaatggctgaaatacacctctaaag
tgacgatttaccatttaaatttttattttaaacaaggataaaatatggaa
taatgctccatatatattgaggtttcaatcttacaat
caacctccaaacacgtaagaaagatatttgtcttatctttgttacccagt
ataaactccatctctttatggaagcatgaggcatacagatgaaatttctg
tcttgactaattgcccttcgtcttcttcttcttcttcttcttcttcttct
tcttcttcttcttcttcttcttcctcctcctcctcctcctcctcctcctc
caccatccttctcctccttcctcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_47552985_47554075
seq2: B6Ng01-113E03.b_46_1132 (reverse)

seq1  ATTGTAAGATTGAAACCTCATATA-ATATGGTAGCATTAATCCATAATTT  49
      |||||||||||||||||||| ||| |||||| ||||||| ||||| ||||
seq2  ATTGTAAGATTGAAACCTCA-ATATATATGG-AGCATTATTCCAT-ATTT  47

seq1  TATACTTGTTTTAAATAAAAATTAAGATGGTTAAAATCGGTCACTTTAGA  99
      ||| ||||||| ||||||||||| | |||||  ||||| |||||||||||
seq2  TATCCTTGTTTAAAATAAAAATTTAAATGGT--AAATC-GTCACTTTAGA  94

seq1  GTGGTATTTCAGCCATTGGCTA-GTGTGTTCAATATAAGTGAAGGACGTG  148
      |  ||||||||||||||||||| |||||||||||||||||||||||||| 
seq2  GGTGTATTTCAGCCATTGGCTAGGTGTGTTCAATATAAGTGAAGGACGT-  143

seq1  GTGCTTCTTGGGAATGAAAAGCTGTTAGGATAGGAAAGTGGTTAGTAAGA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTCTTGGGAATGAAAAGCTGTTAGGATAGGAAAGTGGTTAGTAAGA  193

seq1  ATGAGAAATGTCACAAGTAGAAGGTATGAGTTCAGTACCTGATCTGCTTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAATGTCACAAGTAGAAGGTATGAGTTCAGTACCTGATCTGCTTT  243

seq1  ATTAACTGTTTCCTAGAAGTGTATATTCCACAGGCACAGCCTGTCAGTAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTGTTTCCTAGAAGTGTATATTCCACAGGCACAGCCTGTCAGTAG  293

seq1  ACAGGGTCTTATAAGATGTTTTGTGTGATATCTTGGGCATGTTCTCC-AA  347
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ACAGGGTCTTATAAGATGTTTTGTGTGATATCTTGGGCATGTTCTCCAAA  343

seq1  AGTTAGAATTGATCACCATATGATCCACCCATACAACTTCTGAATGTGTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGAATTGATCACCATATGATCCACCCATACAACTTCTGAATGTGTA  393

seq1  CATAAAAAAACTAAAAATACTTGCATATCTGCATTTACTGTCACTGTTCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAAAAACTAAAAATACTTGCATATCTGCATTTACTGTCACTGTTCA  443

seq1  GCTACCATGTAGCTATCATCAGCTATCATCAATATAAGCGTGGTTAAAGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCATGTAGCTATCATCAGCTATCATCAATATAAGCGTGGTTAAAGA  493

seq1  AAATGCGATATATGATATATATATTATATATACATATATAATATATATTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCGATATATGATATATATATTATATATACATATATAATATATATTC  543

seq1  ATATACATTAGATAATAAATAAGAATAAAATACTGGAATTGGGAAAGAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATTAGATAATAAATAAGAATAAAATACTGGAATTGGGAAAGAAA  593

seq1  TGGAGGAAACTGTATTAAGTGAAATAAGGAAGACACACAAAAATGAATTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAAACTGTATTAAGTGAAATAAGGAAGACACACAAAAATGAATTG  643

seq1  CATATTTCCCCTAAATGTTAGACTTAAAGGAAAGCCAAAGTGTAAGTACA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTCCCCTAAATGTTAGACTTAAAGGAAAGCCAAAGTGTAAGTACA  693

seq1  GTCATGATGACTATGGATCAGAATGGATGTTGGAAAGGAAAATCGAGAAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGATGACTATGGATCAGAATGGATGTTGGAAAGGAAAATCGAGAAG  743

seq1  ATGAAGGCTGATAAATGGACACCCTCTTCATGCAGACAAATGTGTGGTGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGCTGATAAATGGACACCCTCTTCATGCAGACAAATGTGTGGTGC  793

seq1  CTATTGAACCGCATTAATATATACAAGTAATATAAAGTCATTATATTTTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGAACCGCATTAATATATACAAGTAATATAAAGTCATTATATTTTT  843

seq1  GCTTCATGTCTTTAAAGATAGGGCCTAATCTATATCTTTAGCTGGCCTGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCATGTCTTTAAAGATAGGGCCTAATCTATATCTTTAGCTGGCCTGG  893

seq1  AATTGACTGTATAGACCAAAGTAGGTTCAAATTCTTAATAATCTTTTTGC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGACTGTATAGACCAAAGTAGGTTCAAATTCTTAATAATCTTTTTGC  943

seq1  CTCAGACACTTAAGTGCTGGGACTACAAAGATGAGCCTCTAAGTCTGGCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACACTTAAGTGCTGGGACTACAAAGATGAGCCTCTAAGTCTGGCA  993

seq1  ATAACTATCTGTGATTAGTTATCTATGTTAATGATAGTCTTTGAAAATAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTATCTGTGATTAGTTATCTATGTTAATGATAGTCTTTGAAAATAT  1043

seq1  CAGTCTATTGTGAGAGGATAGTGTGGAAAATTAGATGAGAATTC  1091
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTATTGTGAGAGGATAGTGTGGAAAATTAGATGAGAATTC  1087

seq1: chr1_47392807_47393026
seq2: B6Ng01-113E03.g_69_299

seq1  GAATTCCAACCTCCAAACACGTAAGAAAGATATTTGTCTTATCTTTGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACCTCCAAACACGTAAGAAAGATATTTGTCTTATCTTTGTTA  50

seq1  CCCAGTATAAACTCCATCTCTTTATGGAAGCATGAGGCATACAGATGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTATAAACTCCATCTCTTTATGGAAGCATGAGGCATACAGATGAAA  100

seq1  TTTCTGTCTTGACTAATTGCCCTTCGTCTTCTTCTTCTTCTTCTTCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTCTTGACTAATTGCCCTTCGTCTTCTTCTTCTTCTTCTTCTTCT  150

seq1  TCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCTCCTCCTCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCTCCTCCTCCTC  200

seq1  CTCCTCCTCC-TCCTCCTCCT----------  220
      ||||||| || |||| |||||          
seq2  CTCCTCCACCATCCTTCTCCTCCTTCCTCCT  231