BAC Information

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BAC

Clone NameB6Ng01-113G15
Chromosome1 (Build37)14 (Build37)
Map Location 174,860,366 - 174,861,0553,059,394 - 3,059,425
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSlamf6, Vangl2, LOC100040199, Nhlh1, Ncstn, Copa, Pex19, LOC100041219, Wdr42a, Pea15a, Casq1, Timm23p, Atp1a2, Igsf8, Kcnj9, Kcnj10, Pigm, LOC665819, Slamf9, LOC100040274, Igsf9, Tagln2, Ccdc19, EG240916, Slamf8, Fcrl6, Dusp23, LOC100040320, Crp, LOC665875, Apcs
Downstream geneOlfr16, GA_x5J8B7W5Q1F-395172-396104, Olfr1408, GA_x5J8B7W5Q1F-344462-343889, Olfr1406, Olfr218, Olfr1405-ps1, Olfr1404, Fcer1a, Olfr1403, Darc, Cadm3, Aim2, EG240921, BC094916, LOC623121, AI447904, E430029J22Rik, LOC665972, AI607873, Ifi204, EG666028, LOC100040462, Mnda, Ifi203
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113G15.bB6Ng01-113G15.g
ACCDH919216DH919217
length949316
definitionDH919216|Mus musculus domesticus DNA, BAC clone: B6Ng01-113G15, 5' end.DH919217|Mus musculus domesticus DNA, BAC clone: B6Ng01-113G15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(174,860,366 - 174,861,055)(3,059,394 - 3,059,425)
sequence
gaattccttcaaaggaatgctcttgatgacttacatcccccaagtaggcc
tagttcccaaaagacccattcagctatgaactcgtgcattaaccaatcta
gtaaaaactccagcaccttcacgatccagtcacttcatagtaatgccatc
tgcttaagatcaagactttaacatgagcctttataggacccttcatatcc
aaaccacacaaccttccacccctggtcctcagaagctcaattttatatca
taatataaaatgcatttagtatttttctaaggacatttctcaaaattcca
aactcaaagtgtcctctgaggctccctatcaaggcagacaatgttggttg
tgagctcctataaaataaagcaaatataaacagaaacaattgcacagagt
aagtaccatcattcccaaaaggaaaaatgggacaaagaatgggggcagaa
ttaggcaagacctaagcccatgaaagtaaacactaaatctcatcagtctg
tctggagtcacgagaattggtagtagaatgtgagcttctaagaccttgat
gccatcaaaccacatggttctccttcaggctggctcttctcactgcctag
gctttttctttgtagatgttccatgtcctcagtgatttctagtccctgta
tccactgtggcttaaattttgccctctgagcttcacacatcctcttatct
agaaactactcacagagaatccaaactgctatatatttggctgaatttca
ggatttccttttaaatccctgagaaaacctccatgaccctgtacctatgg
cattccacgtacctgcagaatcagcattgcatggacaatggtaagttctg
cctccagctttgaacttggaccacagttgtgctgacctctgtgtgcctga
gtgtaatgaattgaattctgatgaagcaacattccaggagccccagaag
tacttagctattaagaacgaggacatcctgagttttgcaggcaaatgggt
ggaactagaaaacatcatcctgagtgaggtaactcagacccaaaaggaca
ttcatggtatttactcactaataagtggatattagccaaaacaaacaaac
aaacaaacaaacaaatccctcatacagaatatgcaagatacagtccacag
aactcaaaaaggtcaacaagctgaagtgcccaagtgaagatacctcagtc
ccacttaggagagagaagaaagcaaccacaagtggggaaggagggaagga
cttgggagggaaagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_174860366_174861055
seq2: B6Ng01-113G15.b_47_736 (reverse)

seq1  ATGTGTGAAGCTCAGAGGGCAAAATTTAAGCCACAGTGGATACAGGGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGAAGCTCAGAGGGCAAAATTTAAGCCACAGTGGATACAGGGACT  50

seq1  AGAAATCACTGAGGACATGGAACATCTACAAAGAAAAAGCCTAGGCAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCACTGAGGACATGGAACATCTACAAAGAAAAAGCCTAGGCAGTG  100

seq1  AGAAGAGCCAGCCTGAAGGAGAACCATGTGGTTTGATGGCATCAAGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGCCAGCCTGAAGGAGAACCATGTGGTTTGATGGCATCAAGGTCT  150

seq1  TAGAAGCTCACATTCTACTACCAATTCTCGTGACTCCAGACAGACTGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGCTCACATTCTACTACCAATTCTCGTGACTCCAGACAGACTGATG  200

seq1  AGATTTAGTGTTTACTTTCATGGGCTTAGGTCTTGCCTAATTCTGCCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTAGTGTTTACTTTCATGGGCTTAGGTCTTGCCTAATTCTGCCCCC  250

seq1  ATTCTTTGTCCCATTTTTCCTTTTGGGAATGATGGTACTTACTCTGTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTGTCCCATTTTTCCTTTTGGGAATGATGGTACTTACTCTGTGCA  300

seq1  ATTGTTTCTGTTTATATTTGCTTTATTTTATAGGAGCTCACAACCAACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTCTGTTTATATTTGCTTTATTTTATAGGAGCTCACAACCAACAT  350

seq1  TGTCTGCCTTGATAGGGAGCCTCAGAGGACACTTTGAGTTTGGAATTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCCTTGATAGGGAGCCTCAGAGGACACTTTGAGTTTGGAATTTTG  400

seq1  AGAAATGTCCTTAGAAAAATACTAAATGCATTTTATATTATGATATAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGTCCTTAGAAAAATACTAAATGCATTTTATATTATGATATAAAA  450

seq1  TTGAGCTTCTGAGGACCAGGGGTGGAAGGTTGTGTGGTTTGGATATGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTTCTGAGGACCAGGGGTGGAAGGTTGTGTGGTTTGGATATGAAG  500

seq1  GGTCCTATAAAGGCTCATGTTAAAGTCTTGATCTTAAGCAGATGGCATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTATAAAGGCTCATGTTAAAGTCTTGATCTTAAGCAGATGGCATTA  550

seq1  CTATGAAGTGACTGGATCGTGAAGGTGCTGGAGTTTTTACTAGATTGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAAGTGACTGGATCGTGAAGGTGCTGGAGTTTTTACTAGATTGGTT  600

seq1  AATGCACGAGTTCATAGCTGAATGGGTCTTTTGGGAACTAGGCCTACTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCACGAGTTCATAGCTGAATGGGTCTTTTGGGAACTAGGCCTACTTG  650

seq1  GGGGATGTAAGTCATCAAGAGCATTCCTTTGAAGGAATTC  690
      ||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATGTAAGTCATCAAGAGCATTCCTTTGAAGGAATTC  690

seq1: chr14_3059394_3059425
seq2: B6Ng01-113G15.g_359_390 (reverse)

seq1  CACTTTCCCTCCCAGGTCCTTCCCTCCTTCCC  32
      |||||||||||||| |||||||||||||||||
seq2  CACTTTCCCTCCCAAGTCCTTCCCTCCTTCCC  32