BAC Information

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BAC

Clone NameB6Ng01-113P07
Chromosome1 (Build37)
Map Location 53,844,226 - 53,845,333
singlet/doubletsinglet
Overlap genenone
Upstream geneInpp1, Hibch, 1700019D03Rik, Gdf8, 1700019A02Rik, Pms1, LOC671024, Ormdl1, Osgepl1, Asnsd1, EG627858, EG627866, LOC100042162, Dnahc7, Stk17b
Downstream geneHecw2, 4930511H11Rik, Gtf3c3, EG627915, D230012E17Rik, Ankrd44
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113P07.bB6Ng01-113P07.g
ACCDH919606DH919607
length1,0711,103
definitionDH919606|Mus musculus domesticus DNA, BAC clone: B6Ng01-113P07, 5' end.DH919607|Mus musculus domesticus DNA, BAC clone: B6Ng01-113P07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatatatattggatattagttc
tctatctgatttaggatacgtaaagatcctttcccaatctgttggtggcc
tttttgtcttattgttggtgtcttttgccttacagaagctttgcagtttc
atgaggtcccatttgtcaattctcgatcttacagcacaagccattgctgt
tctattcaggaatttttcccctgtgccaatatcttggaggcttttcccca
ctttctcctctataagtttcagtgtctctggttttatgtggagctccttg
atccacttcaatttgaccttagtacaaggagataggaatggatcaattcg
cattcttctacatgataacaaccagttgtgccagcaccatttgttgaaaa
tgctgtcttttttccactggatggttttagctcccttgtcgaagatcaag
tgaccataggtatgtgggttcatttctgggtcttcaattctattccattg
gtctacttctgtcgttacaccagtaccatggctttttaaatcccagttgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagata
aatttgcagattgttctttctaattcgttgaagaattgagttggaatttt
gatagggattgcattgaatctatagattgcttttggcaagatagccattt
ttacaatgttgatcctgtcaatccatgagcatgggagatctttccatctt
ttgagattttctttaatttctttcttcagagacttgaagttcttatcata
cagatctttcacttcttagttagagtcacaccaaggaatttaatattata
tgtgacttattgagaaggtgttgttccctaatttcttctcagcctgtttg
gtctttgtgtagagacaggccattgtcttgtttgaattaatttatacctg
ctacttcacgaacgattacgt
gaattcactggtacgtgacagacattgacctatgtgctactttaatgctc
ctgttccagactcatttttgtcctaacatctgccctaagcaacttaggga
acaaagaggtttatttcacttacaataccagatatacagttcatcattat
gaggaagtcaaggcaggaacttcagacagctagttatatcacatccactc
caagaacagaaagagactagttcatacatgcccaattgtttgcttatgct
ctgctctcagctctgaagcagtttagaaacccctgcctaggggatagtgc
tgcccacagtggcctggccttcccacatcagttaatgtaagtaagataat
ccccgcaggcatgtagactggccaacccagtgtagagaatttcttgttaa
catcttaagagattctaggtcaaattaacaaagttaaccattacagtcgc
atcaccttgggcctgttgtcagacttatgctcttccaaaagacattctgc
taaattggcttggtctctggtactgtgattgaagtaacaagtaatttcct
attctggggagaacactgtggtctctcaaggaaattcaagattcagtgca
ctcatagccatgtatgttcctattgttattccttgaagaggaaatcctcc
tatagtgtgatggctattctgctgtcattacctctgccctatttattgag
ctgagctgatatccttgagtgccactgaccagaaacagtggtaaaagact
aattgtattctcccaattcatttgcgccttatatgaacattaaaatagaa
gaaccgtgtcttcatcaacgtttttattgccgtgacaaaacaccatagcc
aaaaagcaagtggggaggaaaagatttattcaacttatactttcagtgca
cagtccacactgtgggaaatcaggacaggaactcaagcagggcagaaccc
agagttaggatcttgatgcagaggccatggagtgtactgcttacgaggct
tgctacctgtgcctccttgggcatgtatgaacctagtttcttctgtcatg
atctacttcgtcatcacataagataggtgatcttttcccagatccatcca
ggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_53844226_53845333
seq2: B6Ng01-113P07.g_67_1169

seq1  GAATTCACTGGTACGTGACAGACATTGACCTATGTGCTACTTTAATGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGGTACGTGACAGACATTGACCTATGTGCTACTTTAATGCTC  50

seq1  CTGTTCCAGACTCATTTTTGTCCTAACATCTGCCCTAAGCAACTTAGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCAGACTCATTTTTGTCCTAACATCTGCCCTAAGCAACTTAGGGA  100

seq1  ACAAAGAGGTTTATTTCACTTACAATACCAGATATACAGTTCATCATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAGGTTTATTTCACTTACAATACCAGATATACAGTTCATCATTAT  150

seq1  GAGGAAGTCAAGGCAGGAACTTCAGACAGCTAGTTATATCACATCCACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGTCAAGGCAGGAACTTCAGACAGCTAGTTATATCACATCCACTC  200

seq1  CAAGAACAGAAAGAGACTAGTTCATACATGCCCAATTGTTTGCTTATGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACAGAAAGAGACTAGTTCATACATGCCCAATTGTTTGCTTATGCT  250

seq1  CTGCTCTCAGCTCTGAAGCAGTTTAGAAACCCCTGCCTAGGGGATAGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTCAGCTCTGAAGCAGTTTAGAAACCCCTGCCTAGGGGATAGTGC  300

seq1  TGCCCACAGTGGCCTGGCCTTCCCACATCAGTTAATGTAAGTAAGATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCACAGTGGCCTGGCCTTCCCACATCAGTTAATGTAAGTAAGATAAT  350

seq1  CCCCGCAGGCATGTAGACTGGCCAACCCAGTGTAGAGAATTTCTTGTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGCAGGCATGTAGACTGGCCAACCCAGTGTAGAGAATTTCTTGTTAA  400

seq1  CATCTTAAGAGATTCTAGGTCAAATTAACAAAGTTAACCATTACAGTCGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTAAGAGATTCTAGGTCAAATTAACAAAGTTAACCATTACAGTCGC  450

seq1  ATCACCTTGGGCCTGTTGTCAGACTTATGCTCTTCCAAAAGACATTCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCTTGGGCCTGTTGTCAGACTTATGCTCTTCCAAAAGACATTCTGC  500

seq1  TAAATTGGCTTGGTCTCTGGTACTGTGATTGAAGTAACAAGTAATTTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGGCTTGGTCTCTGGTACTGTGATTGAAGTAACAAGTAATTTCCT  550

seq1  ATTCTGGGGAGAACACTGTGGTCTCTCAAGGAAATTCAAGATTCAGTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGGGAGAACACTGTGGTCTCTCAAGGAAATTCAAGATTCAGTGCA  600

seq1  CTCATAGCCATGTATGTTCCTATTGTTATTCCTTGAAGAGGAAATCCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAGCCATGTATGTTCCTATTGTTATTCCTTGAAGAGGAAATCCTCC  650

seq1  TATAGTGTGATGGCTATTCTGCTGTCATTACCTCTGCCCTATTTATTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTGTGATGGCTATTCTGCTGTCATTACCTCTGCCCTATTTATTGAG  700

seq1  CTGAGCTGATATCCTTGAGTGCCACTGACCAGAAACAGTGGTAAAAGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTGATATCCTTGAGTGCCACTGACCAGAAACAGTGGTAAAAGACT  750

seq1  AATTGTATTCTCCCAATTCATTTGCGCCTTATATGAACATTAAAATAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTATTCTCCCAATTCATTTGCGCCTTATATGAACATTAAAATAGAA  800

seq1  GAACCGTGTCTTCATCAACG-TTTTATTGCCGTGACAAAACACCATAGCC  849
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAACCGTGTCTTCATCAACGTTTTTATTGCCGTGACAAAACACCATAGCC  850

seq1  AAAAAGCAAGTTGGGGAGGAAAAGATTTATTCAACTTATACTTTCAGTGC  899
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCAAG-TGGGGAGGAAAAGATTTATTCAACTTATACTTTCAGTGC  899

seq1  ACAGTCCACCACTGTGGGAAATCAGGACAGGAACTCAAGCAGGGCAGGAA  949
      |||||||| ||||||||||||||||||||||||||||||||||||| |||
seq2  ACAGTCCA-CACTGTGGGAAATCAGGACAGGAACTCAAGCAGGGCA-GAA  947

seq1  CCCAGAGTTAGGATC-TGATGCAGAGGCCATGGAGTGTACTGCTTACGAG  998
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCCAGAGTTAGGATCTTGATGCAGAGGCCATGGAGTGTACTGCTTACGAG  997

seq1  GCTTGCTACCTGTGGCCTCCTTGGGCATGTATGAA-CTAGTTTCTTTCTG  1047
      ||||||||||||| ||||||||||||||||||||| |||||||| |||||
seq2  GCTTGCTACCTGT-GCCTCCTTGGGCATGTATGAACCTAGTTTC-TTCTG  1045

seq1  TTCATTGATCTACTCTGTTCATCACCATAAGGATAGGTGATC-TTTCCCA  1096
       ||| ||||||||| |  |||||| ||||| ||||||||||| |||||||
seq2  -TCA-TGATCTACT-TCGTCATCA-CATAA-GATAGGTGATCTTTTCCCA  1090

seq1  G-TCCATCCAGGC  1108
      | |||||||||||
seq2  GATCCATCCAGGC  1103