BAC Information

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BAC

Clone NameB6Ng01-115I19
Chromosome1 (Build37)18 (Build37)
Map Location 102,591,503 - 102,592,42750,166,957 - 50,167,249
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneC230078M14Rik, LOC633295, EG666200
Downstream geneLOC100041909, LOC100040993, LOC383650
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115I19.bB6Ng01-115I19.g
ACCDH920783DH920784
length924775
definitionDH920783|Mus musculus domesticus DNA, BAC clone: B6Ng01-115I19, 5' end.DH920784|Mus musculus domesticus DNA, BAC clone: B6Ng01-115I19, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(102,591,503 - 102,592,427)(50,166,957 - 50,167,249)
sequence
gaattctttattagaattatcaatacacctttatgactactaacatgatt
atagcaaacagatatatcttcctccctttagaatccctcatcatgtaact
ttgcttttttttttttttttaatggatattttctttatttacatttcaaa
tgttatcccttttctaagtctgccctctggaaccacctatcctccacccc
ctgcctctatgagggtaatacccacccactcactcactcctacctttcca
ccctggaattcctacagtgtgatatcaaactgcctggggcccaagggcca
ctctgttggagaccaaaccatgagaaagtaagcctttcacagtttcctac
cctaataagccaaatggccttgtgttaggagccggacacctcctcctccc
tatcccttccggggacctaagaccctaaaaatttgaattatagtcccctc
ttcctaatctcttactgactcccaaaacttgtaaagcctgggctgttaag
gaggaatctacattcctgagttaagactcagggtgcctctcccctgcagt
ctgaattcagccttcatgtccccagatgcctacctctttgttctttgtta
attcccccttgcccctccctatttcccctcactgtgtgattataacctgg
cttatcagactaataaactcagacctagacaggaatcctacttgatctct
ctatttttctccgcccgtttctcttgaacgcttgcagttccttgcctgcc
cacgaataactgggtcctgctggttgagatcccctccctcccatttatgt
gcaaaataccatcctctgctacacaaactctcagagctatgggtcctgtc
atgtatactcttcaggttggtgatccagtccctgaaaataccagagatgt
ctggctgactgacactattgctta
gaattctccctctattaacgtgtagagttcaatgtatggtttaaacttta
gtaatgtgtctttatgagtgttggttcctttgcttttggggcatcaatgt
tcagaattgagatgtgatctaggtggatttatcctattatgagtctgcag
tgatcttgcctaactcttttgattaaatttggttgaaagtctattttatt
acatgtcagacttgctactccaacttacttcttaaatccctttgcatgaa
aaatcttttttccagtcccccccttttttttttacaatgctatatttgtt
tcttatatgcaacataattactgatactgttttcacatccattctgttat
tctgtgacttttaattgtggagctgaatatactgatgctgagatatatta
aggacaagcaattgctatttcctattttgatgctggtggtgatggtttta
tgtgtctctgtgtgtgtgtgtgtgtgtgagtgagtgcgaggacagccagg
gctatacagaaaaccctgtcttgaaaaaaaccaaaaccaaaacaaaaaac
aaaacaaacaaacaaaaaataaccaggggaggatggcaggggtgtgagag
gttgctcagtagttagtacctgttgttgtttctgcagggacctcagttca
gtttccattacatataatgttgactttacaagcacgccttaactccggtt
cctaggcatcagatgcccttcttgtggcctcctaagacatccaggggttg
ctcacacctgaacatgcaagcagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_102591503_102592427
seq2: B6Ng01-115I19.b_44_967

seq1  GAATTCTTTATTAAAATTATCAATACACCTTTATGACTACTAACATGATT  50
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATTAGAATTATCAATACACCTTTATGACTACTAACATGATT  50

seq1  ATAGCAAACATCTTTATCTTCCTCCCTTTAGAATCCCTCATCATGTAACT  100
      ||||||||||  | ||||||||||||||||||||||||||||||||||||
seq2  ATAGCAAACAGATATATCTTCCTCCCTTTAGAATCCCTCATCATGTAACT  100

seq1  TTGCTTTTTTTTTTTTTTTTAATGGATATTTTCTTTATTTACATTTCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTTTTTTTTTTTTTTAATGGATATTTTCTTTATTTACATTTCAAA  150

seq1  TGTTATCCCTTTTCTAGGTCTGCCCTCTGGAACCACCTATCCTCCACCCC  200
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGTTATCCCTTTTCTAAGTCTGCCCTCTGGAACCACCTATCCTCCACCCC  200

seq1  CTGCCTCTATGAGGGTAATACCCACCCACTCACTCACTCCTACCTTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCTATGAGGGTAATACCCACCCACTCACTCACTCCTACCTTTCCA  250

seq1  CCCTGGTATTCCTACAGTGTGATATCAAACTCCCTGGGGCCCAAGGGCCA  300
      |||||| |||||||||||||||||||||||| ||||||||||||||||||
seq2  CCCTGGAATTCCTACAGTGTGATATCAAACTGCCTGGGGCCCAAGGGCCA  300

seq1  CTCTGTTGGAGACCATACCATGAGAAAGTAAGCCTTTCACAGTTTCCTAC  350
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTCTGTTGGAGACCAAACCATGAGAAAGTAAGCCTTTCACAGTTTCCTAC  350

seq1  CCTAATAAGCCAAATGGCCTTGTGTTAGGAGCCGGTCACCTCCTCCTCCC  400
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCTAATAAGCCAAATGGCCTTGTGTTAGGAGCCGGACACCTCCTCCTCCC  400

seq1  TATCCCTTCCTGGCACCTAAGACCCTAAAAGTTTGAATTATAGTCCCCTC  450
      |||||||||| || |||||||||||||||| |||||||||||||||||||
seq2  TATCCCTTCCGGGGACCTAAGACCCTAAAAATTTGAATTATAGTCCCCTC  450

seq1  TTCCTAATCTCTTCCTGACTCCCAAGACTTGTAAAGCCTGGGCTGTTAAG  500
      ||||||||||||| ||||||||||| ||||||||||||||||||||||||
seq2  TTCCTAATCTCTTACTGACTCCCAAAACTTGTAAAGCCTGGGCTGTTAAG  500

seq1  GAGGAATCTACATTCCTGAGTTAAGACTCAGGGTGCCTCTCCCCTGCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAATCTACATTCCTGAGTTAAGACTCAGGGTGCCTCTCCCCTGCAGT  550

seq1  CTGAATTCAGCCTTCATGTCCCCAGATGCCTACCTCTTTGTTCTTTGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTCAGCCTTCATGTCCCCAGATGCCTACCTCTTTGTTCTTTGTTA  600

seq1  ATTCCCCCTCAGCCCCTCCCTATTTCCCCTCACTGTGTGATTATAACCTG  650
      |||||||||  |||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCCCT-TGCCCCTCCCTATTTCCCCTCACTGTGTGATTATAACCTG  649

seq1  GCTTTTCAGCCTAATAAACTCAGACCTTGACAGGAATCCTCCTTGGTCTC  700
      |||| |||| ||||||||||||||||| |||||||||||| |||| ||||
seq2  GCTTATCAGACTAATAAACTCAGACCTAGACAGGAATCCTACTTGATCTC  699

seq1  TCTTTTTTTCCCCGCCCGTTTCTCTTGCAGGTTTGCAGTTCCCCTCGTGC  750
      ||| |||||| |||||||||||||||| | | ||||||||||   | |||
seq2  TCTATTTTTCTCCGCCCGTTTCTCTTGAACGCTTGCAGTTCCTTGCCTGC  749

seq1  CCACGAATAACTGGGTCCTGCTGGTCAGGACACCACTCCTCCCATTTATG  800
      |||||||||||||||||||||||||   ||  ||   |||||||||||||
seq2  CCACGAATAACTGGGTCCTGCTGGTTGAGATCCCCTCCCTCCCATTTATG  799

seq1  TCCAACAATACCATCCTCTGCTACACATACGCCCAGAGCCATGGGTCCCT  850
      | ||| ||||||||||||||||||||| || | |||||| ||||||||  
seq2  TGCAA-AATACCATCCTCTGCTACACAAACTCTCAGAGCTATGGGTCCTG  848

seq1  TCATGTGTACTCTTC-GGTTGGTGATCCAATCCCCGGGAACACCAGAGGT  899
      |||||| |||||||| ||||||||||||| |||| |  || ||||||| |
seq2  TCATGTATACTCTTCAGGTTGGTGATCCAGTCCCTGAAAATACCAGAGAT  898

seq1  GTCTGGCTGATTGACACTATTGCTTA  925
      |||||||||| |||||||||||||||
seq2  GTCTGGCTGACTGACACTATTGCTTA  924

seq1: chr18_50166957_50167249
seq2: B6Ng01-115I19.g_545_841

seq1  AGTGAGTTCCAGGACAGCCAGGGCTATACAGAAAACCCTGTCTTGAAAAA  50
      ||||||| | ||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTGCGAGGACAGCCAGGGCTATACAGAAAACCCTGTCTTGAAAAA  50

seq1  AACCAAAACCAAAACAAAAAACAAAACAAACAAACAAAAAAAAACCAGGG  100
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AACCAAAACCAAAACAAAAAACAAAACAAACAAACAAAAAATAACCAGGG  100

seq1  GAGGATGGCAGGGGTGTGAGAGGTTGCTCAGTAGTTAGTACCTGTTGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATGGCAGGGGTGTGAGAGGTTGCTCAGTAGTTAGTACCTGTTGTTG  150

seq1  TTTCTGCAGGGACCCAGGTTCAGTTTCCAGTACATATAATGTTGAC-TTA  199
      ||||||||||||||   |||||||||||| |||||||||||||||| |||
seq2  TTTCTGCAGGGACCTCAGTTCAGTTTCCATTACATATAATGTTGACTTTA  200

seq1  CAAGCATGCCTTAACTCCGGTTCCTAGGCATCAGATG-CCTTCTTGTGGC  248
      |||||| |||||||||||||||||||||||||||||| ||||||||||||
seq2  CAAGCACGCCTTAACTCCGGTTCCTAGGCATCAGATGCCCTTCTTGTGGC  250

seq1  CTCCCAAGACA-CCAGGGG-TGCGCACACGTGAACATGCAGGCAGAA  293
      |||| |||||| ||||||| ||| ||||| |||||||||| ||||||
seq2  CTCCTAAGACATCCAGGGGTTGCTCACACCTGAACATGCAAGCAGAA  297