BAC Information

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BAC

Clone NameB6Ng01-119M18
Chromosome1 (Build37)
Map Location 68,733,937 - 68,863,827
singlet/doubletdoublet
Overlap geneErbb4
Upstream genenone
Downstream geneLOC667842, EG241084, Ikzf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119M18.bB6Ng01-119M18.g
ACCDH923915DH923916
length1,1761,139
definitionDH923915|Mus musculus domesticus DNA, BAC clone: B6Ng01-119M18, 5' end.DH923916|Mus musculus domesticus DNA, BAC clone: B6Ng01-119M18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,862,635 - 68,863,827)(68,733,937 - 68,735,088)
sequence
gaattcctctttccttagcaggtactttttccttctctgacattttcctc
cgcagtcaacatagtatgttgtagagtatgtgctaaggggaaaaatatga
ggtgagggctgtggtagaaatgttagataaggtgaaattaggcagcttcc
tgtgggaagtaccttataaatgcaattcgaaagtaagagagaattagcct
agcaagtgtttgagggacttcagtccatgaagagcaaacacaagtgaagt
ctccaaggcacataggtgtatgccatgcccaatccactgatgcttaatca
ggtctcattctgttttcctgactcctccgtaaacaaaggagatataactc
ctaaaatagagttcacagaaatgtttaaattaaataattaaaccgttcac
ctagcagctgctttttatgtgggtgtattatatctacaatattacttata
aagacacagtgtgatttctaaaagctaatgccaacaagatgttttcttca
ataattaattctagcttttcataatttaaataatataaaaaatatattca
aatattcttataacttttaaagaaaggaaggaagggaatacatttaatta
tgttataaaatgttaagtcttagttggcaaattcttcatctacttgacct
gcttcactctcaaataggtataattatgtgcattttagggaggaaaagat
tcactaatgcaccctccctagatatccttccccagacaagcaaagtattg
aacattcaggcatgactgttgctttgcaaacattttgttgcttcataggt
ttgtaatttgtttatagcattgtgtatcaaaatctgtataaatcccccag
tggatttgatttcatacactctctcctgatagcttacactttatttgaga
ataagaattttaccatcactcatcacttattattacttttagaagaaatg
aaaatttaaaggacctgagagatggattttctagacgttcatggcagtcc
agtttagaaacttgtaccctttgtaatatcactctacttattttgcttat
gagagattattgagagactgaattcagaatcttaaggaagaatatttaaa
ctataaggcatagaggttggatggtacccatgtttctatatcagtttgat
ttaaaaattaaacaattccacttcat
gaattctttgtactgtttgtgttctgacaacccagagtcctgtcttggat
atggtactcatctcaaattccttataaggagaagagagtagacacccaca
cattaaataaagtttctttgtgaatctgttaatttttctatcacattgtt
tattgttggtgcatataaagacagttgatatataaatatttgcttaagaa
aagtatctatgagctaacccatactatatttttcagttaacaatgacctt
tttttaaagaatgtgacatcacttcaattaaagtcgacaaaaacaataat
gagggaaacattttgaaacacagtttaagtcaataatcattgatttttgg
aactccatatccaagaactgattaaaaaaaaaaaaagagcagttcctgag
agaagtggtcatagacactaatcacagagataatgcattgacaaggtaat
gtaggctcctgtgttcagcaacatctacataataaggttgtagtaagttc
accagttcagtgtttgcaataatcttccatcactgttaaaatcactaaaa
gcataagctgcagtgttaaagtgtgtagctttaaataatgttcaaccaaa
atatttattcatgagaaagaagacttgaacaatagaaccacaaagtacat
catttgtctattttctgttaggaaaagagcttgctcctgttataaggcta
ttataatgaaatatacgacatgtatattaattctctacattggctaaata
ttcatctcccagtatttgattaatagttggaaatagctaaagaagtaaat
ctactttttcttgcttggaaaagtcattttagttgtttggattgtattaa
tgaagacagtagatatctattgaagactttggatgtattagcccaatggt
gcttttatcagctgtatatagttaatccttacacagatttagaaaacatg
ttgctgtaatgattttacatgactgaccctgaagttcagaaaataaaccc
agattccattctgtactgtagcaaccagatgactagttaaattatttctg
atctattttttgtttaatgttcagctacttaggccatgtcagattgtggc
atccagaccaggaccaatgaagtgttcttatacactgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_68862635_68863827
seq2: B6Ng01-119M18.b_49_1224 (reverse)

seq1  ATGAAGTGGATTTGTTTTACATTTTTTAAAAATCAAAACTGATATAGAAA  50
      |||||||||| ||||||   | |||||  ||||| |||||||||||||||
seq2  ATGAAGTGGAATTGTTT---AATTTTT--AAATC-AAACTGATATAGAAA  44

seq1  CATGGGGTACAATCAGACTTCTATGGCTTATAGTTTAAATATTCTTTCCT  100
      ||| |||||| |||  || |||||| |||||||||||||||||||| | |
seq2  CAT-GGGTACCATCCAACCTCTATGCCTTATAGTTTAAATATTCTTCCTT  93

seq1  AAGATGTCTGAAATCAGTCTCTTCAATAATCTTCTCATAAGCAAAATTAA  150
      ||||| |||||| |||||||| ||||||||| |||||||||||||| |||
seq2  AAGAT-TCTGAATTCAGTCTC-TCAATAATC-TCTCATAAGCAAAA-TAA  139

seq1  GTAGAGTGATATTTACAAAGGGTACAAGTTTCTAAACTGGACTTGCCATG  200
      ||||||||||| |||||||||||||||||||||||||||||| |||||||
seq2  GTAGAGTGATA-TTACAAAGGGTACAAGTTTCTAAACTGGAC-TGCCATG  187

seq1  AACGTTCTAGAAAATCCATCTCCTCAGGTCCTTTAAATTTTTCATTTTCT  250
      |||| |||||||||||||||| ||||||||||||||| |||||| |||||
seq2  AACG-TCTAGAAAATCCATCT-CTCAGGTCCTTTAAA-TTTTCA-TTTCT  233

seq1  TCTAAAAGTAATAATAAGTGATGAGTGATGGTAAAATTCTTATTCTCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAAGTAATAATAAGTGATGAGTGATGGTAAAATTCTTATTCTCAAA  283

seq1  TAAAGTGTAAGCTATCAGGAGAGAGTGTATGAAATCAAATCCACTGGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTGTAAGCTATCAGGAGAGAGTGTATGAAATCAAATCCACTGGGGG  333

seq1  ATTTATACAGATTTTGATACACAATGCTATAAACAAATTACAAACCTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATACAGATTTTGATACACAATGCTATAAACAAATTACAAACCTATG  383

seq1  AAGCAACAAAATGTTTGCAAAGCAACAGTCATGCCTGAATGTTCAATACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACAAAATGTTTGCAAAGCAACAGTCATGCCTGAATGTTCAATACT  433

seq1  TTGCTTGTCTGGGGAAGGATATCTAGGGAGGGTGCATTAGTGAATCTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGTCTGGGGAAGGATATCTAGGGAGGGTGCATTAGTGAATCTTTT  483

seq1  CCTCCCTAAAATGCACATAATTATACCTATTTGAGAGTGAAGCAGGTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTAAAATGCACATAATTATACCTATTTGAGAGTGAAGCAGGTCAA  533

seq1  GTAGATGAAGAATTTGCCAACTAAGACTTAACATTTTATAACATAATTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATGAAGAATTTGCCAACTAAGACTTAACATTTTATAACATAATTAA  583

seq1  ATGTATTCCCTTCCTTCCTTTCTTTAAAAGTTATAAGAATATTTGAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTCCCTTCCTTCCTTTCTTTAAAAGTTATAAGAATATTTGAATAT  633

seq1  ATTTTTTATATTATTTAAATTATGAAAAGCTAGAATTAATTATTGAAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTATATTATTTAAATTATGAAAAGCTAGAATTAATTATTGAAGAA  683

seq1  AACATCTTGTTGGCATTAGCTTTTAGAAATCACACTGTGTCTTTATAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTTGTTGGCATTAGCTTTTAGAAATCACACTGTGTCTTTATAAGT  733

seq1  AATATTGTAGATATAATACACCCACATAAAAAGCAGCTGCTAGGTGAACG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGTAGATATAATACACCCACATAAAAAGCAGCTGCTAGGTGAACG  783

seq1  GTTTAATTATTTAATTTAAACATTTCTGTGAACTCTATTTTAGGAGTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATTATTTAATTTAAACATTTCTGTGAACTCTATTTTAGGAGTTAT  833

seq1  ATCTCCTTTGTTTACGGAGGAGTCAGGAAAACAGAATGAGACCTGATTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTTTGTTTACGGAGGAGTCAGGAAAACAGAATGAGACCTGATTAA  883

seq1  GCATCAGTGGATTGGGCATGGCATACACCTATGTGCCTTGGAGACTTCAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGTGGATTGGGCATGGCATACACCTATGTGCCTTGGAGACTTCAC  933

seq1  TTGTGTTTGCTCTTCATGGACTGAAGTCCCTCAAACACTTGCTAGGCTAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTTGCTCTTCATGGACTGAAGTCCCTCAAACACTTGCTAGGCTAA  983

seq1  TTCTCTCTTACTTTCGAATTGCATTTATAAGGTACTTCCCACAGGAAGCT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTTACTTTCGAATTGCATTTATAAGGTACTTCCCACAGGAAGCT  1033

seq1  GCCTAATTTCACCTTATCTAACATTTCTACCACAGCCCTCACCTCATATT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAATTTCACCTTATCTAACATTTCTACCACAGCCCTCACCTCATATT  1083

seq1  TTTCCCCTTAGCACATACTCTACAACATACTATGTTGACTGCGGAGGAAA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCTTAGCACATACTCTACAACATACTATGTTGACTGCGGAGGAAA  1133

seq1  ATGTCAGAGAAGGAAAAAGTACCTGCTAAGGAAAGAGGAATTC  1193
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGAGAAGGAAAAAGTACCTGCTAAGGAAAGAGGAATTC  1176

seq1: chr1_68733937_68735088
seq2: B6Ng01-119M18.g_69_1207

seq1  GAATTCTTTGTACTGTTTGTGTTCTGACAACCCAGAGTCCTGTCTTGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTACTGTTTGTGTTCTGACAACCCAGAGTCCTGTCTTGGAT  50

seq1  ATGGTACTCATCTCAAATTCCTTATAAGGAGAAGAGAGTAGACACCCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTACTCATCTCAAATTCCTTATAAGGAGAAGAGAGTAGACACCCACA  100

seq1  CATTAAATAAAGTTTCTTTGTGAATCTGTTAATTTTTCTATCACATTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAATAAAGTTTCTTTGTGAATCTGTTAATTTTTCTATCACATTGTT  150

seq1  TATTGTTGGTGCATATAAAGACAGTTGATATATAAATATTTGCTTAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTGGTGCATATAAAGACAGTTGATATATAAATATTTGCTTAAGAA  200

seq1  AAGTATCTATGAGCTAACCCATACTATATTTTTCAGTTAACAATGACCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATCTATGAGCTAACCCATACTATATTTTTCAGTTAACAATGACCTT  250

seq1  TTTTTAAAGAATGTGACATCACTTCAATTAAAGTCGACAAAAACAATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAGAATGTGACATCACTTCAATTAAAGTCGACAAAAACAATAAT  300

seq1  GAGGGAAACATTTTGAAACACAGTTTAAGTCAATAATCATTGATTTTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAAACATTTTGAAACACAGTTTAAGTCAATAATCATTGATTTTTGG  350

seq1  AACTCCATATCCAAGAACTGATTAAAAAAAAAAAAAGAGCAGTTCCTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCATATCCAAGAACTGATTAAAAAAAAAAAAAGAGCAGTTCCTGAG  400

seq1  AGAAGTGGTCATAGACACTAATCACAGAGATAATGCATTGACAAGGTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGGTCATAGACACTAATCACAGAGATAATGCATTGACAAGGTAAT  450

seq1  GTAGGCTCCTGTGTTCAGCAACATCTACATAATAAGGTTGTAGTAAGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCTCCTGTGTTCAGCAACATCTACATAATAAGGTTGTAGTAAGTTC  500

seq1  ACCAGTTCAGTGTTTGCAATAATCTTCCATCACTGTTAAAATCACTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTTCAGTGTTTGCAATAATCTTCCATCACTGTTAAAATCACTAAAA  550

seq1  GCATAAGCTGCAGTGTTAAAGTGTGTAGCTTTAAATAATGTTCAACCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAGCTGCAGTGTTAAAGTGTGTAGCTTTAAATAATGTTCAACCAAA  600

seq1  ATATTTATTCATGAGAAAGAAGACTTGAACAATAGAACCACAAAGTACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATTCATGAGAAAGAAGACTTGAACAATAGAACCACAAAGTACAT  650

seq1  CATTTGTCTATTTTCTGTTAGGAAAAGAGCTTGCTCCTGTTATAAGGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTCTATTTTCTGTTAGGAAAAGAGCTTGCTCCTGTTATAAGGCTA  700

seq1  TTATAATGAAATATACGACATGTATATTAATTCTCTACATTGGCTAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATGAAATATACGACATGTATATTAATTCTCTACATTGGCTAAATA  750

seq1  TTCATCTCCCAGTATTTGATTAATAGTTGGAAATAGCTAAAGAAGTAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTCCCAGTATTTGATTAATAGTTGGAAATAGCTAAAGAAGTAAAT  800

seq1  CTAC-TTTTCTTGCTTGGAAAAGTCATTTTAGTTGTTTGGATTGTATTAA  849
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTTTCTTGCTTGGAAAAGTCATTTTAGTTGTTTGGATTGTATTAA  850

seq1  TGAAGACAGTAGATATCTATTGAAGACTTTGGATGTATTAGGCACAATAG  899
      |||||||||||||||||||||||||||||||||||||||| || |||| |
seq2  TGAAGACAGTAGATATCTATTGAAGACTTTGGATGTATTA-GCCCAAT-G  898

seq1  GTGCTTTTTATCAGCTGTATATAGTTAATCCTTACAACAGATTTAAGAAA  949
      |||| |||||||||||||||||||||||||||||| |||||||| |||||
seq2  GTGC-TTTTATCAGCTGTATATAGTTAATCCTTAC-ACAGATTT-AGAAA  945

seq1  ACATGTTGCTGTAATGATTTTACATGACTGACCCTGAAGTTCAGAAAAAT  999
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACATGTTGCTGTAATGATTTTACATGACTGACCCTGAAGTTCAG-AAAAT  994

seq1  AAACCAAGATTCCATTCTGTAACTGTAGCAAAACCAGATGACTTAGTTTT  1049
      ||||| |||||||||||||| ||||||||  ||||||||||| |||  ||
seq2  AAACCCAGATTCCATTCTGT-ACTGTAGC--AACCAGATGAC-TAG--TT  1038

seq1  AAATTATTTCTGATTCTAATTTTTTTGTTTAATGTATCAGCTACTTA-GC  1098
      ||||||||||||| ||||  ||||||||||||||| ||||||||||| ||
seq2  AAATTATTTCTGA-TCTA--TTTTTTGTTTAATGT-TCAGCTACTTAGGC  1084

seq1  CATGTTCAGATTGT-GCATACAGACCAAGGACCAATG-AGTGTCTATAT-  1145
      |||| ||||||||| |||| |||||| |||||||||| |||||   ||| 
seq2  CATG-TCAGATTGTGGCATCCAGACC-AGGACCAATGAAGTGTTCTTATA  1132

seq1  CACTGAT  1152
      |||||||
seq2  CACTGAT  1139