BAC Information

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BAC

Clone NameB6Ng01-121N10
Chromosome7 (Build37)1 (Build37)
Map Location 109,808,955 - 109,809,037173,399,252 - 173,399,794
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneClpb, Phox2a, Inppl1, Folr2, Folr1, 3200002M19Rik, F930017I19Rik, 2400001E08Rik, Lrrc51, LOC667222, Numa1, Il18bp, Rnf121, Trpc2, Art5, Art1, Chrna10, Nup98, Frag1, Rhog, Stim1, Rrm1, Olfr543, Olfr544, Olfr545, LOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552, Olfr553, Olfr554, LOC100040840, Olfr555
Downstream geneOlfr556, Trim68, Olfr557, Olfr558, Olfr33, Olfr559, Olfr78, Olfr560, Olfr561, Olfr562-ps1, Olfr563-ps1, Olfr564, Olfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121N10.bB6Ng01-121N10.g
ACCDH925420DH925421
length1,034537
definitionDH925420|Mus musculus domesticus DNA, BAC clone: B6Ng01-121N10, 5' end.DH925421|Mus musculus domesticus DNA, BAC clone: B6Ng01-121N10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(109,808,955 - 109,809,037)(173,399,252 - 173,399,794)
sequence
gaattcagcaaatgacaaagtgctttttatcttgaaattataggtagtaa
aaattctttgattggtctaaatttataatatttgtgtagctgcttcattt
ggtttctgactggtcttaaaggtataaatatgctctgcatgtcttggtca
tagagtattggcttataagttattgggtatgattaaaaaggtgtaacatt
ggtaacaagaaagttagcttaaaactggtaactcatggttgtagtcattt
taaacagcacgaggcatcaaccagaccaggaaactagggttctaaggata
cttctaaactgggataatattttatgtaattcttatcctaggaactagac
ttataagagacaagatttagaacaatgtctctttaatgaagcattaaaaa
ttgtactgttgggggctggcgaaatggctcaatgattaagagcactgact
gctcttccaaatgtcctctcttcaaatcccagcaaccacatggtggctca
caaccacccgtaatgagatctggcgcgtactcttcagagtcagctgcagt
gtacttacgtataaggaaaaataaatcttttaaaaaaaagttgcgggctg
gtgagatggctcagtgggttagagcacccgactgctcttccgaaggtccg
gagttcaaatcccagcaaccacatggtggctcacaaccatctgtaacaag
atctgacgccttcttctggaatgtctgaagacagctacagtgtacttaca
tataataaataaataaataaatcttttaaaaaaatgttgcactgtcatgc
attcatatatacgaattgactgccaaacttagtaatgtgaaagtgatgtt
tctgatattgattttaaagagaataaattgtttaaaattgtgttttgctt
tctaaaagttatggatctattctaatatgcaaaagaaacttaaaattgtg
gttaaaatggccagtgttccattgattgcagtttgcagtttgatcgcagt
ttaagatttttaacttacccatatatgtagttag
caggtcagtctgaactatataaccagtgagaccttgcatcaaaaataata
aataaataaataaataaataaataaataaataaataaataaataaatatg
caaacaagaaaaacaagcaaaatatctacttatggcgtgagttgattttt
ccatgtaagataacagctccttgcaaataccatggagacatcctgccctt
ggagtttttcctcttgtatgaggaaccaggtacattccacacattgttgg
caaagaagggaagactagcttgctaactgagagacttcggattaagggca
ggtgagccagttgattcttacctcctgatcctcatttctatactgaatct
tagcccaaagtgcttagggtccatatttccacttcatgaggttcgtcaaa
caagaagctcctgccaggtgtggtggtccacaccagaaaccccagctggg
ctacatcacaagagggcaagagccttttttagttcttgttgtgttgtatt
gtggtcttggggtttgtttgttttttggtttgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_109808955_109809037
seq2: B6Ng01-121N10.b_471_553 (reverse)

seq1  TGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTTGG  50
      ||||||||||||||||||||||||||||||||||||   ||||| |||||
seq2  TGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAAGAGAGGACATTTGG  50

seq1  AAGAGCAGTCGGTGCTCTTAACCTCTGAGCCAT  83
      |||||||||| |||||||||| |  ||||||||
seq2  AAGAGCAGTCAGTGCTCTTAATCATTGAGCCAT  83

seq1: chr1_173399252_173399794
seq2: B6Ng01-121N10.g_69_611 (reverse)

seq1  CCCCCCAAACCAAAAAACAAACAAACCCCAAGACCACAATACAACACAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCAAACCAAAAAACAAACAAACCCCAAGACCACAATACAACACAAC  50

seq1  AAGAACTAAAAAAGGCTCTTGCCCTCTTGTGATGTAGCCCAGCTGGGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTAAAAAAGGCTCTTGCCCTCTTGTGATGTAGCCCAGCTGGGGTT  100

seq1  TCTGGTGTGGACCACCACACCTGGCAGGAGCTTCTTGTTTGACGAACCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTGTGGACCACCACACCTGGCAGGAGCTTCTTGTTTGACGAACCTC  150

seq1  ATGAAGTGGAAATATGGACCCTAAGCACTTTGGGCTAAGATTCAGTATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTGGAAATATGGACCCTAAGCACTTTGGGCTAAGATTCAGTATAG  200

seq1  AAATGAGGATCAGGAGGTAAGAATCAACTGGCTCACCTGCCCTTAATCCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGGATCAGGAGGTAAGAATCAACTGGCTCACCTGCCCTTAATCCG  250

seq1  AAGTCTCTCAGTTAGCAAGCTAGTCTTCCCTTCTTTGCCAACAATGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCTCAGTTAGCAAGCTAGTCTTCCCTTCTTTGCCAACAATGTGTG  300

seq1  GAATGTACCTGGTTCCTCATACAAGAGGAAAAACTCCAAGGGCAGGATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTACCTGGTTCCTCATACAAGAGGAAAAACTCCAAGGGCAGGATGT  350

seq1  CTCCATGGTATTTGCAAGGAGCTGTTATCTTACATGGAAAAATCAACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGGTATTTGCAAGGAGCTGTTATCTTACATGGAAAAATCAACTCA  400

seq1  CGCCATAAGTAGATATTTTGCTTGTTTTTCTTGTTTGCATATTTATTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCATAAGTAGATATTTTGCTTGTTTTTCTTGTTTGCATATTTATTTAT  450

seq1  TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTATTTTTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTATTTTTGAT  500

seq1  GCAAGGTCTCACTGGTTATATAGTTCAGACTGACCTGGAATTC  543
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGTCTCACTGGTTATATAGTTCAGACTGACCTGGAATTC  543