BAC Information

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BAC

Clone NameB6Ng01-122P08
Chromosome1 (Build37)
Map Location 73,423,219 - 73,529,472
singlet/doubletdoublet
Overlap genePinc, LOC672208
Upstream geneXrcc5, March4, Smarcal1, Ankar, Rpl37a, Igfbp2, Igfbp5, LOC672187, LOC100042860, Tnp1, 1700027A15Rik
Downstream geneLOC100043291, Tns1, Rufy4, Il8rb, Il8ra, Arpc2, Gpbar1, Aamp, Pnkd, Tmbim1, 2410125D13Rik, Gm216, Slc11a1, Ctdsp1, Vil1, Usp37
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122P08.bB6Ng01-122P08.g
ACCDH926254DH926255
length3971,123
definitionDH926254|Mus musculus domesticus DNA, BAC clone: B6Ng01-122P08, 5' end.DH926255|Mus musculus domesticus DNA, BAC clone: B6Ng01-122P08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,529,070 - 73,529,472)(73,423,219 - 73,424,348)
sequence
caccttcaccgttgccactctggtctgctcagtctgcgagtgtaattgtc
atacttcagctacggagttaacaggatgcagactagaacagtcaaattag
cgattgctgttctagggagagttttgttacacacagggaagggctcagca
gatgatttgaaagggagaaacagacggtggaaggcagattaaggtttaaa
aagcaaataaacacgggtgcatatatgtgtgcatatatatatgtatatta
atacatatatatgtctgtataagcgtacatactcatgtgtatacacacac
acacacacacacacacacacacacacacacacacacacacacatgactac
atgtgtgcctgaacgcacataaagagagaggaggaggaggaggagga
gaattccagagaaagaggtccaggacataacttgttggctagtgacttct
gagaaggtaaactcctttcgggaaggcagtttgcagctatcttactgagg
cgggtgttgaaaggttgagaatgaggatgagagatgttgtgagaatccat
ccccctacctggaagaaagggctggagtgagccatctagcccagctggtg
cttggacatgggattgtttcatcctcagaggatggagggacaggaaagag
aaaagggatacgggtaaaagcttgtcctaaaggccttggagaggagggtg
cggcaaataagggtggatatgagccatgtagaagtttctgggtagctaac
caacctgtggacccgaccctactccatcattatatttcccctgtgtactg
ctggtctcatctgcagcccttggcagtttcctgctcatggtagcagttat
actggtgcaacagaactacagctttcttctggaggtcagtgggtcacttg
cacagtagccagaccacccatggggacagtatacataagtcatgacctct
agctcttaggcatcctatcagtttgtttttgcctgtggtgagcccactct
ttaatctcaatgctaccaagctgcctctgcccccttttacccagactcca
acctcctctaagatgccttcttgataatctccatgggattattattaatc
agcacagtctttctccctgcctcctaaggatggaagcaatggaagaatgc
tgctctttcctgctgtaggaatggtccctgccccattctagcagaaataa
agatggagggggtgccagctgagacaggactctggataatttgctagaaa
tcaccctctgaactgaagaccctgggggttcacaggagtcacaggcacaa
acttgaagcatcctggaaattacctgtagggtgtatttgctgcatttcct
aagaggtcacagtccagttgggtacagtcatgatatcttggatctggaag
ggaaaggaggaaaattcatggatttctagtggctggcagcagtttggcaa
ctgagcaagaactgtggcattccataagggtctggtttcaaggtctctct
gcttggaaacaggcctgtgaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_73529070_73529472
seq2: B6Ng01-122P08.b_47_449 (reverse)

seq1  TCCTCCTCCTCCTCCTCCTCTCTCTTTATGTGCGTTCAGGCACACATGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCCTCCTCCTCCTCTCTCTTTATGTGCGTTCAGGCACACATGTA  50

seq1  GTCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  100

seq1  TGTGTATACACATGAGTATGTACGCTTATACAGACATATATATGTATTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATACACATGAGTATGTACGCTTATACAGACATATATATGTATTAA  150

seq1  TATACATATATATATGCACACATATATGCACCCGTGTTTATTTGCTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATATATATATGCACACATATATGCACCCGTGTTTATTTGCTTTTT  200

seq1  AAACCTTAATCTGCCTTCCACCGTCTGTTTCTCCCTTTCAAATCATCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTAATCTGCCTTCCACCGTCTGTTTCTCCCTTTCAAATCATCTGC  250

seq1  TGAGCCCTTCCCTGTGTGTAACAAAACTCTCCCTAGAACAGCAATCGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCCTTCCCTGTGTGTAACAAAACTCTCCCTAGAACAGCAATCGCTA  300

seq1  ATTTGACTGTTCTAGTCTGCATCCTGTTAACTCCGTAGCTGAAGTATGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACTGTTCTAGTCTGCATCCTGTTAACTCCGTAGCTGAAGTATGAC  350

seq1  AATTACACTCGCAGACTGAGCAGACCAGAGTGGCAACGGTGAAGGTGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACACTCGCAGACTGAGCAGACCAGAGTGGCAACGGTGAAGGTGGAA  400

seq1  TTC  403
      |||
seq2  TTC  403

seq1: chr1_73423219_73424348
seq2: B6Ng01-122P08.g_65_1187

seq1  GAATTCCAGAGAAAGAGGTCCAGGACATAACTTGTTGGCTAGTGACTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGAAAGAGGTCCAGGACATAACTTGTTGGCTAGTGACTTCT  50

seq1  GAGAAGGTAAACTCCTTTCGGGAAGGCAGTTTGCAGCTATCTTACTGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGTAAACTCCTTTCGGGAAGGCAGTTTGCAGCTATCTTACTGAGG  100

seq1  CGGGTGTTGAAAGGTTGAGAATGAGGATGAGAGATGTTGTGAGAATCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTGTTGAAAGGTTGAGAATGAGGATGAGAGATGTTGTGAGAATCCAT  150

seq1  CCCCCTACCTGGAAGAAAGGGCTGGAGTGAGCCATCTAGCCCAGCTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTACCTGGAAGAAAGGGCTGGAGTGAGCCATCTAGCCCAGCTGGTG  200

seq1  CTTGGACATGGGATTGTTTCATCCTCAGAGGATGGAGGGACAGGAAAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGACATGGGATTGTTTCATCCTCAGAGGATGGAGGGACAGGAAAGAG  250

seq1  AAAAGGGATACGGGTAAAAGCTTGTCCTAAAGGCCTTGGAGAGGAGGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGATACGGGTAAAAGCTTGTCCTAAAGGCCTTGGAGAGGAGGGTG  300

seq1  CGGCAAATAAGGGTGGATATGAGCCATGTAGAAGTTTCTGGGTAGCTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCAAATAAGGGTGGATATGAGCCATGTAGAAGTTTCTGGGTAGCTAAC  350

seq1  CAACCTGTGGACCCGACCCTACTCCATCATTATATTTCCCCTGTGTACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTGTGGACCCGACCCTACTCCATCATTATATTTCCCCTGTGTACTG  400

seq1  CTGGTCTCATCTGCAGCCCTTGGCAGTTTCCTGCTCATGGTAGCAGTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTCATCTGCAGCCCTTGGCAGTTTCCTGCTCATGGTAGCAGTTAT  450

seq1  ACTGGTGCAACAGAACTACAGCTTTCTTCTGGAGGTCAGTGGGTCACTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTGCAACAGAACTACAGCTTTCTTCTGGAGGTCAGTGGGTCACTTG  500

seq1  CACAGTAGCCAGACCACCCATGGGGACAGTATACATAAGTCATGACCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTAGCCAGACCACCCATGGGGACAGTATACATAAGTCATGACCTCT  550

seq1  AGCTCTTAGGCATCCTATCAGTTTGTTTTTGCCTGTGGTGAGCCCACTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTAGGCATCCTATCAGTTTGTTTTTGCCTGTGGTGAGCCCACTCT  600

seq1  TTAATCTCAATGCTACCAAGCTGCCTCTGCCCCCTTTTACCCAGACTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTCAATGCTACCAAGCTGCCTCTGCCCCCTTTTACCCAGACTCCA  650

seq1  ACCTCCTCTAAGATGCCTTCTTGATAATCTCCATGGGATTATTATTAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTCTAAGATGCCTTCTTGATAATCTCCATGGGATTATTATTAATC  700

seq1  AGCACAGTCTTTCTCCCTGCCTCCTAAGGATGGAAGCAATGGAAGAATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGTCTTTCTCCCTGCCTCCTAAGGATGGAAGCAATGGAAGAATGC  750

seq1  TGCTCTTTCCTGCTGTAGGAATGGTCCCTGCCCCATTCTAGCAGAAATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTTCCTGCTGTAGGAATGGTCCCTGCCCCATTCTAGCAGAAATAA  800

seq1  AGATGGAGGGGGTGCCAGCTGAGACAGGACTCTGGATAATTTGCTAGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGAGGGGGTGCCAGCTGAGACAGGACTCTGGATAATTTGCTAGAAA  850

seq1  TCACCCTCTGAACTGAAGACCCTGGGGGTTCACAGGAGTCACAGGCACAA  900
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCACCCTCTGAACTGAAGACCCTGGGGGTTCACAGGAGTCACAGGCAC-A  899

seq1  AACTTGAAGCATCCTGGAAATTACCTGTAGGGTGTATTTGCTGCATTTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGAAGCATCCTGGAAATTACCTGTAGGGTGTATTTGCTGCATTTCC  949

seq1  TAAGAGGTCACAGTCCAGTTGGGTACCAGTCATGATATTCCTGGATCTGG  1000
      ||||||||||||||||||||||||| ||||||||||| || |||||||||
seq2  TAAGAGGTCACAGTCCAGTTGGGTA-CAGTCATGATA-TCTTGGATCTGG  997

seq1  AAGGGAAAGGAGGGAAAATTCATTGGATTTCTTAGTGGCTGGCAGCAGTT  1050
      ||||||||||| |||||||||| |||||||| ||||||||||||||||||
seq2  AAGGGAAAGGA-GGAAAATTCA-TGGATTTC-TAGTGGCTGGCAGCAGTT  1044

seq1  TGGCAAACTGAGCAGGAACTGT-GCATTCCATTAGGGTCTGTTTTCCAGT  1099
      |||| ||||||||| ||||||| ||||||||| |||||||| |||| || 
seq2  TGGC-AACTGAGCAAGAACTGTGGCATTCCATAAGGGTCTGGTTTCAAG-  1092

seq1  GTCCTCTCTGC-TGGGAACAGGCCTGTGAGGG  1130
      || |||||||| ||| ||||||||||||||||
seq2  GT-CTCTCTGCTTGGAAACAGGCCTGTGAGGG  1123