BAC Information

Click to search

BAC

Clone NameB6Ng01-123A11
Chromosome1 (Build37)
Map Location 97,227,072 - 97,228,252
singlet/doubletsinglet
Overlap geneTmem157
Upstream geneLOC666025, LOC100040685, LOC383603
Downstream geneLOC100041686, Rnu7-ps2, St8sia4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123A11.bB6Ng01-123A11.g
ACCDH926305DH926306
length1,1611,172
definitionDH926305|Mus musculus domesticus DNA, BAC clone: B6Ng01-123A11, 5' end.DH926306|Mus musculus domesticus DNA, BAC clone: B6Ng01-123A11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcttttttattattattagatattttcttcatttacatttca
aatgttatcccctgttctagtttcctctccaaaagtcccctataacctcc
cccgccctggaattcttagaattccagttcgagggaggaaaattggggct
gcctccttatcctggtacaatctcattccatttgtttagtatttatttga
tttccatctaaaatataaatatccccattctgtcccttccctcacctaag
agtctccgctcctattagttttccagatatggatccaaatcccacagggc
tgggaatcctgcagttttctttgtttcctgctgcatgaagaaccttagca
ttctacactagcaattgtaattaattttcaatcatatcttacctctcctg
cattaatacttataaaattatcctttatcacacagattctttgttgttga
tattttgtttgcatgttggtttgttttaaagcacgtaaccatttctaggg
aggaaggggaatcttcttccttacaggtgcataaacttagcttttgtact
gtgtgtagagagtttctgtcttcctcgtccactctcttgtttaggagctg
taaacctgggaagaacatatcaaggttttacatggtgggtggcattttca
cttcttttgaacagaaaaacccaggagatgagatagatagcatgtcttta
ctaaagcaagccgccacttttctgaaaaaaaaaaaaaaaaaaataaggaa
attttcagagaaaatatcaagaatccacttcactattggaagagtaaaac
aactttagagcacaaagaacaaatggaaacagtttattagtagagggaag
tttaacttctgtccaaacaaaataattattataatgatagggattagaag
acaactctaaaattaggaaacagccttaaagtgagtcctagcattgtcca
ggactaggctagtaatctgtgctaactctgtcatttaaatccctacattt
gcttcctcccctctttcacgctgctgtgtttattaatattgatgtggtca
ttatactgggacataaggacacctaatcatacatactttctggcgtgtat
atcagggtccggatggaaaaagagatcactaagggttaagctgacaatta
actggacccta
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggagatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaagatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctggccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggag
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagacactaccatatccggggatccatcccataatc
agcttccaaatgctgacacatttgcatacactagcaagattatgctgaaa
aggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaag
catagaagtggatgctcacagtcggctattggatggatcacatgggcccc
aatgaatgagctagagaaagtaccaaagaagctaaagggatctgcaacac
ttaagtggaacacttatgactatcagtaccggagcttttgatctagctgc
tatgcatcaaagatggctaatcgccattcctgaagagagccattgacacg
caatcttttaattgccatgatcagggtaagcgcggagtcccataaaatgg
ggatgatggtgtgacaggcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_97227072_97228252
seq2: B6Ng01-123A11.b_49_1209

seq1  GAATTCTTTCTTTTTTATTATTATTAGATATTTTCTTCATTTACATTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTTTTTATTATTATTAGATATTTTCTTCATTTACATTTCA  50

seq1  AATGTTATCCCCTGTTCTAGTTTCCTCTCCAAAAGTCCCCTATAACCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTATCCCCTGTTCTAGTTTCCTCTCCAAAAGTCCCCTATAACCTCC  100

seq1  CCCGCCCTGGAATTCTTAGAATTCCAGTTCGAGGGAGGAAAATTGGGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCCCTGGAATTCTTAGAATTCCAGTTCGAGGGAGGAAAATTGGGGCT  150

seq1  GCCTCCTTATCCTGGTACAATCTCATTCCATTTGTTTAGTATTTATTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCTTATCCTGGTACAATCTCATTCCATTTGTTTAGTATTTATTTGA  200

seq1  TTTCCATCTAAAATATAAATATCCCCATTCTGTCCCTTCCCTCACCTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATCTAAAATATAAATATCCCCATTCTGTCCCTTCCCTCACCTAAG  250

seq1  AGTCTCCGCTCCTATTAGTTTTCCAGATATGGATCCAAATCCCACAGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCCGCTCCTATTAGTTTTCCAGATATGGATCCAAATCCCACAGGGC  300

seq1  TGGGAATCCTGCAGTTTTCTTTGTTTCCTGCTGCATGAAGAACCTTAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATCCTGCAGTTTTCTTTGTTTCCTGCTGCATGAAGAACCTTAGCA  350

seq1  TTCTACACTAGCAATTGTAATTAATTTTCAATCATATCTTACCTCTCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACACTAGCAATTGTAATTAATTTTCAATCATATCTTACCTCTCCTG  400

seq1  CATTAATACTTATAAAATTATCCTTTATCACACAGATTCTTTGTTGTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATACTTATAAAATTATCCTTTATCACACAGATTCTTTGTTGTTGA  450

seq1  TATTTTGTTTGCATGTTGGTTTGTTTTAAAGCACGTAACCATTTCTAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGTTTGCATGTTGGTTTGTTTTAAAGCACGTAACCATTTCTAGGG  500

seq1  AGGAAGGGGAATCTTCTTCCTTACAGGTGCATAAACTTAGCTTTTGTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGGGAATCTTCTTCCTTACAGGTGCATAAACTTAGCTTTTGTACT  550

seq1  GTGTGTAGAGAGTTTCTGTCTTCCTCGTCCACTCTCTTGTTTAGGAGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTAGAGAGTTTCTGTCTTCCTCGTCCACTCTCTTGTTTAGGAGCTG  600

seq1  TAAACCTGGGAAGAACATATCAAGGTTTTACATGGTGGGTGGCATTTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTGGGAAGAACATATCAAGGTTTTACATGGTGGGTGGCATTTTCA  650

seq1  CTTCTTTTGAACAGAAAAACCCAGGAGATGAGATAGATAGCATGTCTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTTGAACAGAAAAACCCAGGAGATGAGATAGATAGCATGTCTTTA  700

seq1  CTAAAGCAAGCCGCCACTTTTCTGAAAAAAAAAAAAAAAAAAAAAAAAGG  750
      ||||||||||||||||||||||||  ||||||||||||||||||| ||||
seq2  CTAAAGCAAGCCGCCACTTTTCTG--AAAAAAAAAAAAAAAAAAATAAGG  748

seq1  AAATCTTCAGAGAAAATATCAAGAATCCACTTCACTATTGGAAGAGTAAA  800
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTCAGAGAAAATATCAAGAATCCACTTCACTATTGGAAGAGTAAA  798

seq1  ACAACTTTAGAGCACAAAGAACAAATGGAAACAGTTTATTAGTAGAGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTTAGAGCACAAAGAACAAATGGAAACAGTTTATTAGTAGAGGGA  848

seq1  AGTTTAACTTCTGTCCAAAACAAAATAATTATTATAATGATAGGGATTAG  900
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGTTTAACTTCTGTCC-AAACAAAATAATTATTATAATGATAGGGATTAG  897

seq1  AAGACAACTCTAAAATTAAGGAAACAGCCTTAAAAGTGAGTCCTAGCATT  950
      ||||||||||||||||| ||||||||||||| ||||||||||||||||||
seq2  AAGACAACTCTAAAATT-AGGAAACAGCCTT-AAAGTGAGTCCTAGCATT  945

seq1  GTCCAGGACTAGGCTAGTAATCTGTGCTAACTCTGTCATTTAAATCCCTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGGACTAGGCTAGTAATCTGTGCTAACTCTGTCATTTAAATCCCTA  995

seq1  CATTTGCTTCCTCACTCCTTTCACGCTGCTGTGTTTAATTTAATATTGTA  1050
      ||||||||||||| |  ||||||||||||||||||||  ||||||||| |
seq2  CATTTGCTTCCTCCCCTCTTTCACGCTGCTGTGTTTA--TTAATATTG-A  1042

seq1  TGTGTTCATTATACTTTGTACATAAAGACACCTAATCATACCAATACTTT  1100
      |||| ||||||||| | | |||||| |||||||||||||||  |||||||
seq2  TGTGGTCATTATAC-TGGGACATAAGGACACCTAATCATAC--ATACTTT  1089

seq1  CTTGCTGTTTATATCAGTGTCAGGATCAGAAAAAGAGTTTCATTTAGGTG  1150
      || || || |||||||| ||| ||||  |||||||||  ||| | ||| |
seq2  CTGGC-GTGTATATCAGGGTCCGGAT-GGAAAAAGAG-ATCACTAAGG-G  1135

seq1  TTTAAGAGCTGCAGTAATTAGCTGGACCCTA  1181
      ||    |||||    ||||| ||||||||||
seq2  TT---AAGCTG--ACAATTAACTGGACCCTA  1161