BAC Information

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BAC

Clone NameB6Ng01-123B19
Chromosome1 (Build37)
Map Location 97,736,683 - 97,737,726
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383603, Tmem157, LOC100041686, Rnu7-ps2, St8sia4
Downstream geneGm1833, Slco4c1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123B19.bB6Ng01-123B19.g
ACCDH926369DH926370
length1,1821,070
definitionDH926369|Mus musculus domesticus DNA, BAC clone: B6Ng01-123B19, 5' end.DH926370|Mus musculus domesticus DNA, BAC clone: B6Ng01-123B19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatccagtaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gtttatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaacgtttggagatgagatga
aaggatggaccatgtagagactgccatatccagggattcaccccataatc
agcatccaaacgctgacaccattgcatacactaacaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctatggatggatcatagggctcccaa
tggaggagctagagaaagtagcccaggagctaagggatctgcaaccctat
aggtggacacattatgactaaccagtaccccggagctcttgactctagct
gctaatatttaaagaatgggcctaagcgtctccacttgaaagagaggccc
attggactcgcaactttatatgcccaatacagggaacatccaggccaaaa
cggtgacgggtgtgcgcgtagatggtgggtcc
gaattcaactccaccacactgcttctcaattaactaatagatcactgcct
gaactaactctcaactgactgactgtttttgaactattctgaaatagctt
ctttttcctgtgatgtccttttgagagttgggtataatctatctctgaat
tactctttcaaatctttatttgattcattcctttgtctgcccctcaatta
gatgttacttttaaatatggctgcctccttctggaatctaacctcactta
cactatttgggattaaagatgaataccaagggtgtatctatattatagtc
caagaaattaaaggtgtgtggcatgtctgaatcccagactgattatatag
acctaggactttgaatgtgatcctttgccagagcagtcatatagctggat
taaaattcctctatataatctaggttgttgcttaaagttttcatttgttt
tttggtaaacaatcttttaaggaattaatctgaatttctctggatcttct
acatgacccaatgaacgaagaagattgcatgtaacgtgtaggtttttttt
cctgaaatttcttttttctttttttaaatttcaatttaaactcaactttc
tttttttcttttaaaattatattttaattacatttcacctttacctttac
ctctgccaactctcctatatagccttcttcctttctatttcaaatacatg
gttttattttattatatattcatatgtgtgtatgcatatatattaatcaa
tataattaattgcacttatatacatgttttcaggactgactatatggtat
gaacagccaattggtgtgcttttcctttggaaagcaacctcttccattcc
cagcttcctcggttgtctatagccctctgtttatagatgaacatagcaag
cttttctccactagttgagcatgctcactggtgtcatctttgtccagctc
acatttagctgagcacaagcagcccagctggtaaaagtttacattatttt
ctgatcttctgactataccatccagttttaacaggcagaagtagttaaat
tataagtagattgatacaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_97736683_97737726
seq2: B6Ng01-123B19.g_104_1136 (reverse)

seq1  TTTGTTATCAAATCTACTGTAATAATTTAACTACTCTTGGCTGTTTAAAA  50
      |||| |||| |||||||  | ||||||||||||||  || ||| ||||||
seq2  TTTG-TATC-AATCTAC--TTATAATTTAACTACTTCTGCCTG-TTAAAA  45

seq1  CTGGGATGGTATAGTCAGGAGAATCAGAAATATATGTTAAACTTTTACCA  100
      || ||||||||||||||| || |||||||| |||   |||||||||||||
seq2  CT-GGATGGTATAGTCAGAAG-ATCAGAAA-ATAATGTAAACTTTTACCA  92

seq1  GCTGGGCTGCTTGTGCTCAGCTTAAATGTGAGCTGGACAAAGATGACACC  150
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GCTGGGCTGCTTGTGCTCAGC-TAAATGTGAGCTGGACAAAGATGACACC  141

seq1  AGTGAGCATGCTCAACTAGGTGGAGAAAAGCTTGCTATGTTTCATCTATA  200
      |||||||||||||||||| |||||||||||||||||||| ||||||||||
seq2  AGTGAGCATGCTCAACTA-GTGGAGAAAAGCTTGCTATG-TTCATCTATA  189

seq1  AACAGAGGGCTATAGACAACCGAGGAAGCTGGGAATGGAAGAGGTTGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AACAGAGGGCTATAGACAACCGAGGAAGCTGGGAATGGAAGAGGTTG-CT  238

seq1  TTCCAAAGGAAAAGCACACCAATTGGCTGTTCATACCATATAGTCAGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAAGGAAAAGCACACCAATTGGCTGTTCATACCATATAGTCAGTCC  288

seq1  TGAAAACATGTATATAAGTGCAATTAATTATATTGATTAATATATATGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACATGTATATAAGTGCAATTAATTATATTGATTAATATATATGCA  338

seq1  TACACACATATGAATATATAATAAAATAAAACCATGTATTTGAAATAG-A  399
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TACACACATATGAATATATAATAAAATAAAACCATGTATTTGAAATAGAA  388

seq1  AGGAAGAAGGCTATATAGGAGAGTTGGCAGAGGTAAAGGTAAAGGTGAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAAGGCTATATAGGAGAGTTGGCAGAGGTAAAGGTAAAGGTGAAA  438

seq1  TGTAATTAAAATATAATTTTAAAAGAAAAAAAGAAAGTTGAGTTTAAATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTAAAATATAATTTTAAAAGAAAAAAAGAAAGTTGAGTTTAAATT  488

seq1  GAAATTTAAAAAAAGAAAAAAGAAATTTCAGGAAAAAAAACCTACACGTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTAAAAAAAGAAAAAAGAAATTTCAGGAAAAAAAACCTACACGTT  538

seq1  ACATGCAATCTTCTTCGTTCATTGGGTCATGTAGAAGATCCAGAGAAATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCAATCTTCTTCGTTCATTGGGTCATGTAGAAGATCCAGAGAAATT  588

seq1  CAGATTAATTCCTTAAAAGATTGTTTACCAAAAAACAAATGAAAACTTTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTAATTCCTTAAAAGATTGTTTACCAAAAAACAAATGAAAACTTTA  638

seq1  AGCAACAACCTAGATTATATAGAGGAATTTTAATCCAGCTATATGACTGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAACCTAGATTATATAGAGGAATTTTAATCCAGCTATATGACTGC  688

seq1  TCTGGCAAAGGATCACATTCAAAGTCCTAGGTCTATATAATCAGTCTGGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCAAAGGATCACATTCAAAGTCCTAGGTCTATATAATCAGTCTGGG  738

seq1  ATTCAGACATGCCACACACCTTTAATTTCTTGGACTATAATATAGATACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGACATGCCACACACCTTTAATTTCTTGGACTATAATATAGATACA  788

seq1  CCCTTGGTATTCATCTTTAATCCCAAATAGTGTAAGTGAGGTTAGATTCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGGTATTCATCTTTAATCCCAAATAGTGTAAGTGAGGTTAGATTCC  838

seq1  AGAAGGAGGCAGCCATATTTAAAAGTAACATCTAATTGAGGGGCAGACAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAGGCAGCCATATTTAAAAGTAACATCTAATTGAGGGGCAGACAA  888

seq1  AGGAATGAATCAAATAAAGATTTGAAAGAGTAATTCAGAGATAGATTATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGAATCAAATAAAGATTTGAAAGAGTAATTCAGAGATAGATTATA  938

seq1  CCCAACTCTCAAAAGGACATCACAGGAAAAAGAAGCTATTTCAGAATAGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACTCTCAAAAGGACATCACAGGAAAAAGAAGCTATTTCAGAATAGT  988

seq1  TCAAAAACAGTCAGTCAGTTGAGAGTTAGTTCAGGCAGTGATCTA  1044
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAACAGTCAGTCAGTTGAGAGTTAGTTCAGGCAGTGATCTA  1033