BAC Information

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BAC

Clone NameB6Ng01-124G04
Chromosome1 (Build37)
Map Location 134,930,337 - 135,102,776
singlet/doubletdoublet
Overlap genePik3c2b, Ppp1r15b
Upstream geneMfsd4, Pctk3, LOC100042221, Lemd1, EG638532, Klhdc8a, Nuak2, Tmcc2, Ripk5, Rbbp5, Tmem81, Cntn2, Nfasc, Lrrn2, Mdm4, LOC638636
Downstream genePlekha6, Golt1a, Kiss1, LOC100038824, Ren1, Etnk2, Sox13, LOC667371, Snrpe, Zc3h11a, LOC667118, Lax1, Atp2b4, Optc, Prelp, LOC100042352, LOC100042358, Fmod, Btg2, EG667414, Chit1, Chi3l1, Mybph, Adora1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124G04.bB6Ng01-124G04.g
ACCDH927308DH927309
length307520
definitionDH927308|Mus musculus domesticus DNA, BAC clone: B6Ng01-124G04, 5' end.DH927309|Mus musculus domesticus DNA, BAC clone: B6Ng01-124G04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,930,337 - 134,930,643)(135,102,251 - 135,102,776)
sequence
cgcgtcgctctaagtttacagatcaaagcccacctagcgagagcggaggt
gaagctcgcaattgttcaggggctaaaacgcagcaggaagcagaatttag
ataagttaaatctctcacgggaagacgacactgccagagggagcaattgc
acaaggttccttactcttatgtaaagaactgtaggaagtctgttccacca
gggcccggatagctcagtcggtagagcatcagactttttatctgatggtc
cagggttcaagtccctgttcgggcgctagtctttttaaaatttttctccc
ccacttc
aagagcagcctggacatcttggtgagacttggtggtccatgcctccatga
gttcaatgtcatcctttgctacacagagttgcaggccagcctagaccatg
ggagaacatagctcaaaagccaaatagataaaataaatggcaaatcaagt
gaacttgtggccaggatttaacaaactcctagaaactggccaggtctcta
gctctggcctggggtaccttttctgtagctacctgaacacatggggcaag
aaaccagggtgctagccgggcagtggtggtgcacacctttaatcccagca
cttgggaagtagaggcaggcagatttctaagttcgaggccagcctggtct
acaggatgagttccaggacagccagggctatacagagaaaccctgttaca
aaacaaacaaacaaacaaacaaacaaacaaaaaaaaccagggtgctattc
cctttctggcagaactattgcactatatcctcgtgttctctctctctctc
tctctctctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_134930337_134930643
seq2: B6Ng01-124G04.b_50_356

seq1  CGCGTCGCTCTAAGTTTACAGATCAAAGCCCACCTAGCGAGAGCGGAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGTCGCTCTAAGTTTACAGATCAAAGCCCACCTAGCGAGAGCGGAGGT  50

seq1  GAAGCTCGCAATTGTTCAGGGGCTAAAACGCAGCAGGAAGCAGAATTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTCGCAATTGTTCAGGGGCTAAAACGCAGCAGGAAGCAGAATTTAG  100

seq1  ATAAGTTAAATCTCTCACGGGAAGACGACACTGCCAGAGGGAGCAATTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTTAAATCTCTCACGGGAAGACGACACTGCCAGAGGGAGCAATTGC  150

seq1  ACAAGGTTCCTTACTCTTATGTAAAGAACTGTAGGAAGTCTGTTCCACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGTTCCTTACTCTTATGTAAAGAACTGTAGGAAGTCTGTTCCACCA  200

seq1  GGGCCCGGATAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTC  250
      |||||||||||||||||||||||||||||||||||||| |||||| ||||
seq2  GGGCCCGGATAGCTCAGTCGGTAGAGCATCAGACTTTTTATCTGATGGTC  250

seq1  CAGGGTTCAAGTCCCTGTTCGGGCGCTTGTCTTTTTAAAATTTTTCTCCC  300
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CAGGGTTCAAGTCCCTGTTCGGGCGCTAGTCTTTTTAAAATTTTTCTCCC  300

seq1  CCACTTC  307
      |||||||
seq2  CCACTTC  307

seq1: chr1_135102251_135102776
seq2: B6Ng01-124G04.g_66_591 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACACGAGGATATAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACACGAGGATATAGTG  50

seq1  CAATAGTTCTGCCAGAAAGGGAATAGCACCCTGGTTTTTTTTGTTTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGTTCTGCCAGAAAGGGAATAGCACCCTGGTTTTTTTTGTTTGTTT  100

seq1  GTTTGTTTGTTTGTTTGTTTTGTAACAGGGTTTCTCTGTATAGCCCTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGTTTGTTTGTTTTGTAACAGGGTTTCTCTGTATAGCCCTGGC  150

seq1  TGTCCTGGAACTCATCCTGTAGACCAGGCTGGCCTCGAACTTAGAAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGGAACTCATCCTGTAGACCAGGCTGGCCTCGAACTTAGAAATCT  200

seq1  GCCTGCCTCTACTTCCCAAGTGCTGGGATTAAAGGTGTGCACCACCACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCTCTACTTCCCAAGTGCTGGGATTAAAGGTGTGCACCACCACTG  250

seq1  CCCGGCTAGCACCCTGGTTTCTTGCCCCATGTGTTCAGGTAGCTACAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGCTAGCACCCTGGTTTCTTGCCCCATGTGTTCAGGTAGCTACAGAA  300

seq1  AAGGTACCCCAGGCCAGAGCTAGAGACCTGGCCAGTTTCTAGGAGTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTACCCCAGGCCAGAGCTAGAGACCTGGCCAGTTTCTAGGAGTTTGT  350

seq1  TAAATCCTGGCCACAAGTTCACTTGATTTGCCATTTATTTTATCTATTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCCTGGCCACAAGTTCACTTGATTTGCCATTTATTTTATCTATTTG  400

seq1  GCTTTTGAGCTATGTTCTCCCATGGTCTAGGCTGGCCTGCAACTCTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGAGCTATGTTCTCCCATGGTCTAGGCTGGCCTGCAACTCTGTGT  450

seq1  AGCAAAGGATGACATTGAACTCATGGAGGCATGGACCACCAAGTCTCACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGGATGACATTGAACTCATGGAGGCATGGACCACCAAGTCTCACC  500

seq1  AAGATGTCCAGGCTGCTCTTGAATTC  526
      ||||||||||||||||||||||||||
seq2  AAGATGTCCAGGCTGCTCTTGAATTC  526