BAC Information

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BAC

Clone NameB6Ng01-124P06
Chromosome1 (Build37)
Map Location 45,013,629 - 45,014,767
singlet/doubletsinglet
Overlap genenone
Upstream geneTpp2, A530098C11Rik, EG666713, 1700029F09Rik, Kdelc1, Bivm, Ercc5, 4832428D23Rik, LOC435619, Txn-ps1, Gulp1, LOC100041738, LOC100041752
Downstream geneLOC383640, Col3a1, Col5a2, EG666799, LOC631429, LOC666814, EG666819, Wdr75, EG433297, LOC383644, Slc40a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124P06.bB6Ng01-124P06.g
ACCDH927724DH927725
length7171,143
definitionDH927724|Mus musculus domesticus DNA, BAC clone: B6Ng01-124P06, 5' end.DH927725|Mus musculus domesticus DNA, BAC clone: B6Ng01-124P06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttgcaagacttttaacatgaaggggtgttgtattttg
tcaaaatcttttttggcatctaatgatatgatcaagcatctttttctttg
aatttatttatatagtggattacgtgggtggatttccttatattgaatca
tccctgcatcactgggatgaagcctaattgatcattttgaatgataattt
tgatctgattttggatttgatttgtgagaattttatttaatatttttgaa
ttaatattcataaaggaacttggtttaatgttatcattctttgttgggtc
tttgtgtggttatgtataagtgtaactgtggcttcatagaatgaattagt
gtttgttctgtttctattttgttgaatagtttggagagtattggtattag
gtcctctttgatggcctgagagaattctgcactaaaacactctggtcctg
gggattttttttttttttttttttttttttttttgttgttgggagacttt
taatgactgcttctatttccttaggggttatgggactgtttagatggttt
atctgatcctaatttaactttagtatctggtatctgtctagaaaattgtc
tatttcacccagatttttccagttttgtttagtgtaaagcttgtgtagtt
ggatttgttgaaatttttaatttcttcagttctgttgtatgtttttcctt
ttcctttttgatttgat
gaattcatctatcgcataatcagtaaatataaaagcagactacatttttc
tatcaggcattaaataaaataatcttctggcctctgagaagtagcagaag
cagggcttctgaagagcttgtttcttagtgaatctctctggcctgtggct
ctctaaacacataccttgatattatacagcatttaaatctactttgttga
aatttcttttgttcttgcctaaatctattttagagtaaattattagaaaa
tacattacaatcactaatgtgatacaaatagcaaatattacccttttaaa
acatgatattttggagaaggtgaaagtgcatttttacattaacatctgtt
acaaattatctgtgtccacactgtcacgatcctgcatacacagtgacaga
agacatgatgaatgtccctgctccatactgacgacacatgtctcagccca
tttcttccaacttggtaaagatcattttttcttttttgacttcccacatt
aactaattttaattcattagtttggcacactttggtcataagtcatatgg
aacacattctataccttaaggacttgccataaaaatcataggcagagagt
atatttttaaaacagtctctctagtggcttaaagccaaatatgacccaac
tggccaggaattattcacagaaaactctaactttatttcttatttctcaa
aacgtcattttcaacatttcttttaactagtaaataagactaaatgaaag
tatcggtaattcattttattcaagtagtatttttcacggtgatgtttaat
aattgaatttgtattagtgtatgctaatatgagaaagttttctttttaaa
gagacctagaagtaaatgtttgagagtggtagattgtaatgtctgatctt
gtttttccttaaatcttatgttatgaaataatggatctcattaaagctag
agtaattaaaataggtaaatcattactctgttttttatgagtgtaacaat
ttatatgacttattgtctatttgatggtacagagaatgtggaagaatatc
caaatgtgaattaagaaagaaaagataggaagttgtttacctgactgggt
gttatacctccaacctctattgaagggctgaccaaaccattta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_45013629_45014767
seq2: B6Ng01-124P06.g_68_1210 (reverse)

seq1  TAAATGGTTTGCT-AGCCTCTC-ATAGAGTTTGGAGGTATAACA-CAGGT  47
      ||||||||||| | ||||  || |||||| |||||||||||||| |  ||
seq2  TAAATGGTTTGGTCAGCCCTTCAATAGAGGTTGGAGGTATAACACCCAGT  50

seq1  CAGGT-AACAACTTCCTATC-TATCTTTCTTAATTCACATTTTGAATATT  95
      ||||| |||||||||||||| | |||||||||||||||| |||| |||||
seq2  CAGGTAAACAACTTCCTATCTTTTCTTTCTTAATTCACA-TTTGGATATT  99

seq1  CTTCCACA-TCTCTGTACCATCATATAGACAATAAGTCATATAAATTGTT  144
      |||||||| |||||||||||||| ||||||||||||||||||||||||||
seq2  CTTCCACATTCTCTGTACCATCAAATAGACAATAAGTCATATAAATTGTT  149

seq1  ACACTCAT-AAAAACAGAGTAATGATTTACCTATTATTAATTACTCTAGC  193
      |||||||| |||||||||||||||||||||||||| ||||||||||||||
seq2  ACACTCATAAAAAACAGAGTAATGATTTACCTATT-TTAATTACTCTAGC  198

seq1  TTTAATGAGATCCATTATTTCATAACATAAGATTTTAAGGAAAAACAAGA  243
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTAATGAGATCCATTATTTCATAACATAAGA-TTTAAGGAAAAACAAGA  247

seq1  TCAGACATTACAATCTACCACTCTCAAACATTTACTTCTAGGTCTCTTTA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACATTACAATCTACCACTCTCAAACATTTACTTCTAGGTCTCTTTA  297

seq1  AAAAGAAAACTTTCTCATATTAGCATACACTAATACAAATTCAATTATTA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAACTTTCTCATATTAGCATACACTAATACAAATTCAATTATTA  347

seq1  AACATCACCGTGAAAAATACTACTTGAATAAAATGAATTACCGATACTTT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCACCGTGAAAAATACTACTTGAATAAAATGAATTACCGATACTTT  397

seq1  CATTTAGTCTTATTTACTAGTTAAAAGAAATGTTGAAAATGACGTTTTGA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAGTCTTATTTACTAGTTAAAAGAAATGTTGAAAATGACGTTTTGA  447

seq1  GAAATAAGAAATAAAGTTAGAGTTTTCTGTGAATAATTCCTGGCCAGTTG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAGAAATAAAGTTAGAGTTTTCTGTGAATAATTCCTGGCCAGTTG  497

seq1  GGTCATATTTGGCTTTAAGCCACTAGAGAGACTGTTTTAAAAATATACTC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATATTTGGCTTTAAGCCACTAGAGAGACTGTTTTAAAAATATACTC  547

seq1  TCTGCCTATGATTTTTATGGCAAGTCCTTAAGGTATAGAATGTGTTCCAT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTATGATTTTTATGGCAAGTCCTTAAGGTATAGAATGTGTTCCAT  597

seq1  ATGACTTATGACCAAAGTGTGCCAAACTAATGAATTAAAATTAGTTAATG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTATGACCAAAGTGTGCCAAACTAATGAATTAAAATTAGTTAATG  647

seq1  TGGGAAGTCAAAAAAGAAAAAATGATCTTTACCAAGTTGGAAGAAATGGG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGTCAAAAAAGAAAAAATGATCTTTACCAAGTTGGAAGAAATGGG  697

seq1  CTGAGACATGTGTCGTCAGTATGGAGCAGGGACATTCATCATGTCTTCTG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACATGTGTCGTCAGTATGGAGCAGGGACATTCATCATGTCTTCTG  747

seq1  TCACTGTGTATGCAGGATCGTGACAGTGTGGACACAGATAATTTGTAACA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTGTATGCAGGATCGTGACAGTGTGGACACAGATAATTTGTAACA  797

seq1  GATGTTAATGTAAAAATGCACTTTCACCTTCTCCAAAATATCATGTTTTA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTAATGTAAAAATGCACTTTCACCTTCTCCAAAATATCATGTTTTA  847

seq1  AAAGGGTAATATTTGCTATTTGTATCACATTAGTGATTGTAATGTATTTT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTAATATTTGCTATTTGTATCACATTAGTGATTGTAATGTATTTT  897

seq1  CTAATAATTTACTCTAAAATAGATTTAGGCAAGAACAAAAGAAATTTCAA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAATTTACTCTAAAATAGATTTAGGCAAGAACAAAAGAAATTTCAA  947

seq1  CAAAGTAGATTTAAATGCTGTATAATATCAAGGTATGTGTTTAGAGAGCC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTAGATTTAAATGCTGTATAATATCAAGGTATGTGTTTAGAGAGCC  997

seq1  ACAGGCCAGAGAGATTCACTAAGAAACAAGCTCTTCAGAAGCCCTGCTTC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCCAGAGAGATTCACTAAGAAACAAGCTCTTCAGAAGCCCTGCTTC  1047

seq1  TGCTACTTCTCAGAGGCCAGAAGATTATTTTATTTAATGCCTGATAGAAA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACTTCTCAGAGGCCAGAAGATTATTTTATTTAATGCCTGATAGAAA  1097

seq1  AATGTAGTCTGCTTTTATATTTACTGATTATGCGATAGATGAATTC  1139
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGTCTGCTTTTATATTTACTGATTATGCGATAGATGAATTC  1143