BAC Information

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BAC

Clone NameB6Ng01-125A19
Chromosome1 (Build37)
Map Location 149,220,078 - 149,221,327
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383571, B830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125A19.bB6Ng01-125A19.g
ACCDH927797DH927798
length1,2351,156
definitionDH927797|Mus musculus domesticus DNA, BAC clone: B6Ng01-125A19, 5' end.DH927798|Mus musculus domesticus DNA, BAC clone: B6Ng01-125A19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaactaacctgagataaaaattcactgacccccaacccctgaacg
gggcttgggcagtgacctaggctgtagcagtatggatttgaagctgacta
gatttaagggctcctacagagaacagcagagaggcatctatgcctcagag
agcctttctgtgtttgcttccctgtattctttgcttcccaccctacctcc
ctccatctccaaacagggatacagacaactcagatttttttatactcagc
ttctccctgggaataaataattgggagacaaaggaacaaaggactccagg
ccaggtaattcatttatataaagagagaaatataaccttttgatacttga
agaagtttataaagatatagtgctctaataagtcttaaaggatactcata
ttctgtctaacatggactccacgggaattttgggtttaaattccagtttg
ccaagctgcctcttataagtcggtatggtacctaaagataagaaatttta
tctgtggttcagaaccagatagggaatattaatcattgactccaagtaaa
gagagcagtgataatcaccttctatgaacaggtattaattaataaaagtc
cgtgggtctaggtgaagagcataacagatattataataggaattaattta
aaaataaatgtcagtggctcttggtagaggtgagcacaagagatagaagg
tataaataaatgcctgtggctccgcatagagagcacaacagacaggatgg
ctgctctggggcagagagcttattaattatgagaaatttcatattcagaa
ttagagaggaatatttatcactgactccaagttgagagaacagtgataat
cacctgctatgaacaagtattaattaataaaagtctgtggctccaagtag
agagcataacaggtagatattataatggggttttaattaaataaatgact
gtggctcaaggtagagagcaccttaatatgtcttacgggatactcatatc
tgtctagtgtgggctccacaggaaatttgggtttaaatcctggtttgaca
agctgattcttataagcaggtataggaaggatggaatggagagagaaagg
gaaaggaaggaaagtgaagtttggttatttgatttagatgggttaataag
tcctgcgagaactctcatattcggttaacgtgatcccaggcattgggtga
atctgcactgtctaattgaaaggcctaacataggg
gaattctttgtttagttctgtaccccatttttaatggggttatctgaatt
tctggagttcagcttcttaaactctttgtatatattggatattagttccc
tatcagatttaggattggtaaaaatcctttcccaatctgttggtggcctt
tttgtcttcttgacagtactgtttgtcatacagaagctttgcaatttcat
gaggtcccatttgtcgattcttgctcttacagcacaggccattgttgttc
tgtttaggaatttttcccctgtgccaatatctttgagggtttttcccact
ttctcctctataaatttcagtgtctcgggttttatttggagttcttggat
ctacttagacttgagctttgtacaaggagataagaatggatatattctca
ttcttctacatgataacctccagttgtgccagtaccatttgttaaaaatg
ctgtcttgttttttctactggatggttttagcttccttgtcaaagatcaa
atgaccataggtgagtgggttcatttctgggtcttcaattctattccatt
gatctacctgtctgttgctgtaccgataccatgcagttttttatcacaat
tgctcagtagtactgcttgaggtcaggcatggggattcccacagaggttc
ttttattgttgagaatagtttttgctatcctaggtttttggtattccaga
tgaattttcaaattgccctttttaactcagtgaagaattgagttggaatt
ttgatgtgaattgcattgagtctgtagattgctttttatcctgctttttc
aggatagccagaaaacctgacatagtattaacactagatccagaaatacc
tctcttgagcatatacccagaagattttctaaatggtaataaggacacat
tctccactatgatcatagcagccctattataatagccagaccctggaata
aaccggatctcccttcacagagaatggatacagaaaatgtggtacattta
caccaatggagtacttactccactattaaaacatgaatcatgaaattctt
ggcaaatggatagtatctggatgaattcattcctgagtaagcttacccaa
caaagagtccttgatatccctaacgtatggattatgccggaacctgaaat
ccaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_149220078_149221327
seq2: B6Ng01-125A19.b_45_1278

seq1  GAATTCAACTAACCTGAGATAAAAATTCACTGACCCCCAACCCCTGAACG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTAACCTGAGATAAAAATTCACTGACCCCCAACCCCTGAACG  50

seq1  GGGCTTGGGCAGTGACCTAGGCTGTAGCAGTATGGATTTGAAGCTGACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTGGGCAGTGACCTAGGCTGTAGCAGTATGGATTTGAAGCTGACTA  100

seq1  GATTTAAGGGCTCCTACAGAGAACAGCAGAGAGGCATCTATGCCTCAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAAGGGCTCCTACAGAGAACAGCAGAGAGGCATCTATGCCTCAGAG  150

seq1  AGCCTTTCTGTGTTTGCTTCCCTGTATTCTTTGCTTCCCACCCTACCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTCTGTGTTTGCTTCCCTGTATTCTTTGCTTCCCACCCTACCTCC  200

seq1  CTCCATCTCCAAACAGGGATACAGACAACTCAGATTTTTTTATACTCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATCTCCAAACAGGGATACAGACAACTCAGATTTTTTTATACTCAGC  250

seq1  TTCTCCCTGGGAATAAATAATTGGGAGACAAAGGAACAAAGGACTCCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCTGGGAATAAATAATTGGGAGACAAAGGAACAAAGGACTCCAGG  300

seq1  CCAGGTAATTCATTTATATAAAGAGAGAAATATAACCTTTTGATACTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTAATTCATTTATATAAAGAGAGAAATATAACCTTTTGATACTTGA  350

seq1  AGAAGTTTATAAAGATATAGTGCTCTAATAAGTCTTAAAGGATACTCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTTATAAAGATATAGTGCTCTAATAAGTCTTAAAGGATACTCATA  400

seq1  TTCTGTCTAACATGGACTCCACGGGAATTTTGGGTTTAAATTCCAGTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCTAACATGGACTCCACGGGAATTTTGGGTTTAAATTCCAGTTTG  450

seq1  CCAAGCTGCCTCTTATAAGTCGGTATGGTACCTAAAGATAAGAAATTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCTGCCTCTTATAAGTCGGTATGGTACCTAAAGATAAGAAATTTTA  500

seq1  TCTGTGGTTCAGAACCAGATAGGGAATATTAATCATTGACTCCAAGTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGTTCAGAACCAGATAGGGAATATTAATCATTGACTCCAAGTAAA  550

seq1  GAGAGCAGTGATAATCACCTTCTATGAACAGGTATTAATTAATAAAAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCAGTGATAATCACCTTCTATGAACAGGTATTAATTAATAAAAGTC  600

seq1  CGTGGGTCTAGGTGAAGAGCATAACAGATATTATAATAGGAATTAATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGGTCTAGGTGAAGAGCATAACAGATATTATAATAGGAATTAATTTA  650

seq1  AAAATAAATGTCAGTGGCTCTTGGTAGAGGTGAGCACAAGAGATAGAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATGTCAGTGGCTCTTGGTAGAGGTGAGCACAAGAGATAGAAGG  700

seq1  TATAAATAAATGCCTGTGGCTCCGCATAGAGAGCACAACAGACAGGATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATAAATGCCTGTGGCTCCGCATAGAGAGCACAACAGACAGGATGG  750

seq1  CTGCTCTGGGGCAGAGAGCTTATTAATTATGAGAAATTTCATATTCAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTGGGGCAGAGAGCTTATTAATTATGAGAAATTTCATATTCAGAA  800

seq1  TTAGAGAGGAATATTTATCACTGACTCCAAGTTGAGAGAACAGTGATAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGAGGAATATTTATCACTGACTCCAAGTTGAGAGAACAGTGATAAT  850

seq1  CACCTGCTATGAACAAGTATTAATTAATAAAAGTCTGTGGCTCCAAGTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCTATGAACAAGTATTAATTAATAAAAGTCTGTGGCTCCAAGTAG  900

seq1  AGAGCATAACAGGTAGATATTATAATGGGGTTTTAATTAAATAAATGACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATAACAGGTAGATATTATAATGGGGTTTTAATTAAATAAATGACT  950

seq1  GTGGCTCAAGGTAGAGAGCACCTTAATATGTCTTACGGGATACTCATATT  1000
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTGGCTCAAGGTAGAGAGCACCTTAATATGTCTTACGGGATACTCATA-T  999

seq1  CTGTCTAGTGTGGGCTCCACAGGAAATTTGGGTTTAAATCCTGGTTTGAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTAGTGTGGGCTCCACAGGAAATTTGGGTTTAAATCCTGGTTTGAC  1049

seq1  AAGCTGATTCATATAAGCAGGTATAGAAAGGAATGGAAAGGAGAGAGAAA  1100
      |||||||||| ||||||||||||||| |||| |||||| |||||||||||
seq2  AAGCTGATTCTTATAAGCAGGTATAGGAAGG-ATGGAATGGAGAGAGAAA  1098

seq1  GGGAAAGGAAAAGAAAGTAGAAGTATGAGTTAATTGATTTAAGAATGGTA  1150
      |||||||| || |||||| ||||| || |||| ||||||||   ||||  
seq2  GGGAAAGG-AAGGAAAGT-GAAGTTTG-GTTATTTGATTTA--GATGGGT  1143

seq1  TAATAAAGTCTGCAAG-AGACTCATATTCTGTCTAACGTGGACTCCACAG  1199
      ||||||   |||| || |  ||||||||| || |||||||   ||| |||
seq2  TAATAAGTCCTGCGAGAACTCTCATATTCGGT-TAACGTG--ATCC-CAG  1189

seq1  GAATTTTGGGTTGAAATCCTGACATGACTAAATTAGAAAGGCCTAA-ATA  1248
      | |||   || ||||   |||   || ||||  | ||||||||||| |||
seq2  GCATT---GGGTGAA--TCTGCACTGTCTAA--TTGAAAGGCCTAACATA  1232

seq1  GG  1250
      ||
seq2  GG  1234