BAC Information

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BAC

Clone NameB6Ng01-125N20
Chromosome1 (Build37)
Map Location 183,776,441 - 183,967,375
singlet/doubletdoublet
Overlap geneEG433384, Enah
Upstream geneBC031781, Lefty2, Pycr2, Lefty1, Tmem63a, Ephx1, 9130409I23Rik, EG625597, Fgfr3-ps, Nvl, Cnih4, Wdr26, LOC100042363, LOC666519, Cnih3, Ccdc121, A230079K17Rik, Lbr
Downstream geneSrp9, EG625823, Degs1, 1700047M11Rik, Fbxo28, LOC435657, ENSMUSG00000073482, Trp53bp2, Capn2, LOC666624, Capn8, 4922505E12Rik, Susd4, Tlr5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125N20.bB6Ng01-125N20.g
ACCDH928381DH928382
length501198
definitionDH928381|Mus musculus domesticus DNA, BAC clone: B6Ng01-125N20, 5' end.DH928382|Mus musculus domesticus DNA, BAC clone: B6Ng01-125N20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(183,966,869 - 183,967,375)(183,776,441 - 183,776,638)
sequence
tcaaagatgtcactacaagcagtctcttggattgcttaagggcatttgcg
agtcttgaggttacaagtgcaaagatacttttatgcccaaaccttttata
tctacacaaaatccctgttgatttgtgagggctaaagatgtaacttactg
gctaagacagagcaaagcaaaatattctaggggcataatagcacttgcct
ttggttcctagtactctggggactctggggaggggacctacattggttct
aagtttgtacttttggaggaaaaaacatgtgcgacatggggtttctaaac
tatctcctactagatgtcattaaaaatatataaggtgggtcttggttagg
gttagtattgctattaatgaaacaccatgaccaaaacttgggaaggaaag
ggtttatttggcttatacttccatgtcactgttcatcctcaaagaagtca
gcagcaggcagggcaggaacctggaggcaggagctgatacacgggctggg
g
ctaaaaaagaaacaagaaaaaaattcttgccagggagggtggtgaaaatg
cctttagtcctagcacttggaaggcgcaggcaggtgtgtgagtttgaggc
cattctggtctattgagagaatttcaagatagccagggctacacagagaa
accctgtcttggaaagaagaagggaaggaaggatggaagggagggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_183966869_183967375
seq2: B6Ng01-125N20.b_48_554 (reverse)

seq1  CCCCAGCCCGTGTATCAGCTCCTGCCTCCAGGTTCCTGCCCTGCCTGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGCCCGTGTATCAGCTCCTGCCTCCAGGTTCCTGCCCTGCCTGCTG  50

seq1  CTGACTTCTTTGAGGATGAACAGTGACATGGAAGTATAAGCCAAATAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTCTTTGAGGATGAACAGTGACATGGAAGTATAAGCCAAATAAAC  100

seq1  CCTTTCCTTCCCAAGTTTTGGTCATGGTGTTTCATTAATAGCAATACTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCTTCCCAAGTTTTGGTCATGGTGTTTCATTAATAGCAATACTAA  150

seq1  CCCTAACCAAGACCCACCTTATATATTTTTAATGACATCTAGTAGGAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAACCAAGACCCACCTTATATATTTTTAATGACATCTAGTAGGAGAT  200

seq1  AGTTTAGAAACCCCATGTCGCACATGTTTTTTCCTCCAAAAGTACAAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAGAAACCCCATGTCGCACATGTTTTTTCCTCCAAAAGTACAAACT  250

seq1  TAGAACCAATGTAGGTCCCCTCCCCAGAGTCCCCAGAGTACTAGGAACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACCAATGTAGGTCCCCTCCCCAGAGTCCCCAGAGTACTAGGAACCA  300

seq1  AAGGCAAGTGCTATTATGCCCCTAGAATATTTTGCTTTGCTCTGTCTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAGTGCTATTATGCCCCTAGAATATTTTGCTTTGCTCTGTCTTAG  350

seq1  CCAGTAAGTTACATCTTTAGCCCTCACAAATCAACAGGGATTTTGTGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAAGTTACATCTTTAGCCCTCACAAATCAACAGGGATTTTGTGTAG  400

seq1  ATATAAAAGGTTTGGGCATAAAAGTATCTTTGCACTTGTAACCTCAAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAAGGTTTGGGCATAAAAGTATCTTTGCACTTGTAACCTCAAGAC  450

seq1  TCGCAAATGCCCTTAAGCAATCCAAGAGACTGCTTGTAGTGACATCTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCAAATGCCCTTAAGCAATCCAAGAGACTGCTTGTAGTGACATCTTTG  500

seq1  AGAATTC  507
      |||||||
seq2  AGAATTC  507

seq1: chr1_183776441_183776638
seq2: B6Ng01-125N20.g_73_270

seq1  CTAAAAAAGAAACAAGAAAAAAATTCTTGCCAGGGAGGGTGGTGAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAAAGAAACAAGAAAAAAATTCTTGCCAGGGAGGGTGGTGAAAATG  50

seq1  CCTTTAGTCCTAGCACTTGGAAGGCGCAGGCAGGTGTGTGAGTTTGAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAGTCCTAGCACTTGGAAGGCGCAGGCAGGTGTGTGAGTTTGAGGC  100

seq1  CATTCTGGTCTATTGAGAGAATTTCAAGATAGCCAGGGCTACACAGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGGTCTATTGAGAGAATTTCAAGATAGCCAGGGCTACACAGAGAA  150

seq1  ACCCTGTCTTGGAAAGAAGAAGGGAAGGAAGGATGGAAGGGAGGGAGG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTCTTGGAAAGAAGAAGGGAAGGAAGGATGGAAGGGAGGGAGG  198