BAC Information

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BAC

Clone NameB6Ng01-126C23
Chromosome1 (Build37)
Map Location 79,356,436 - 79,357,400
singlet/doubletsinglet
Overlap genenone
Upstream geneSgpp2, Farsb, Mogat1, Acsl3, Utp14b, LOC620521, Kcne4, LOC100039260, EG545332
Downstream geneScg2, Ap1s3, Wdfy1, Mrpl44, Serpine2, EG433326, LOC665064, LOC100039325, A830043J08Rik, 2310015K22Rik, Cul3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126C23.bB6Ng01-126C23.g
ACCDH928622DH928623
length1,223953
definitionDH928622|Mus musculus domesticus DNA, BAC clone: B6Ng01-126C23, 5' end.DH928623|Mus musculus domesticus DNA, BAC clone: B6Ng01-126C23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaggacaagaactcaaacagggctggaacctggaggcaggagcag
aagcagaggctatggaagggtgctaactaactggcttgctccccatggct
tgctcagcctgctcttttataggacccaggaccaccagcccagggatggc
cccacccacaatgggcttggtctcccatcatttattaattaaacaaatgc
cctacaggcttgcctgcagcccaatcttaggaggcatttttcttaattga
gggctcctcctctctgtgactttagctcgtgtcaagctgacataaaacta
gccagcacagccctcatcggagaagctccttggcatagtggatagtgatt
gatgcagagaactcacaactcatccaagtgcacagagtgagtgtctgtgg
agtgctcagatatgaatgagatgtctagatcacaaggctgccccgaggct
aaggaaaaaatgcaggaactggggcaaaaagattgtaagagccagagcct
ggggaggatggacgcaagtgtcttttggacttgataagacctttgtatgc
aggatcccacagcaacagtggttgcttgcataagatctgcataaaataat
gtgagtcaacattttagtgtggagtggagaggggactaaaaagcctccct
atacctgaagaccagttaacagttgatggcttctggaggaacgaaagcta
tttattaaaggggataatcactggtaggcccaccatgctccagtgggtag
gccctatacccataattatatgacagcatggattggactagcagtttata
aaaaaaaataaagaaaaggtgtgaggaggaggagtcatcagagatgactc
tgtgagaggtatgactaaaatatggtgtatggatgtatgaaattatcaaa
aagttagtaaaatttaaagtgtagcttgtttccaaacctgcctcctactt
atctggggatttccaaaataagtggtgggatgtgttttggtagagcacat
ctttacaagctttgttctctagccaagcgccttcttctttagctagagag
atgagctcttgatgtgcctcaggttgacttcttctcctgtgtaggtgaga
atagcctttgtgttacctattcctcaaaggctggcttcaagccaccttga
tggttcctagattctaagaatgataatgcaggtaatgccataccacgctg
aagacgacacaacactttgctgc
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttctggagttctttatatatgttggatattaatccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttggcacagacattcttactta
tgttttagactttgtatttttggattcttttaaagatatatatatcttta
taaatatatatataagtatatatatataaagtatatatatatatatactg
ttcttgtcttcagacacaccagaagagggcatcagaacctattagagatg
tttgtgagccaccatgtggttgctgggaattgaactcaggacctctggaa
aagcagtcagtgctcttaacctctttgccatctctccagccccatgttct
acttttaaaaataaatctgttcttaatatttattttgttttatgagtatc
tgtgcatgggtgcacttgaaccagtggatatgagaggaatgtatcagatc
ccccagaactggggatagaggaggttgtaagcccttacttgagttctgtg
tactgaattcagagtctttgcaagagaagaatgtgctcctaacagatgaa
ccctctctccagccacccactatgacctactatttattattttcccacta
cggactcaaagtgatatcctctgagttttattattttatgcagatgaaga
atataccccagtataattttaaattcatggtgtacatcagagccagactg
gagcctacgttccaagcaagaaacatcagtagggttgtttggggaaggca
tgttcacaaaaataagcattgacattgtttttgttgcactgtgctacact
gtgagcatctcttacgttcatcagtaccatgtatttcaagttattatgtc
tgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_79356436_79357400
seq2: B6Ng01-126C23.g_63_1015

seq1  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50

seq1  TTCTGAAGTCCACCTTCTGGAGTTCTTTATATATGTTGGATATTAATCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGTCCACCTTCTGGAGTTCTTTATATATGTTGGATATTAATCCC  100

seq1  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCT  150

seq1  TTTTGTCTTATTGACGGTGTCTTTTGCCTTGGCACAGACATTCTTACTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTATTGACGGTGTCTTTTGCCTTGGCACAGACATTCTTACTTA  200

seq1  TGTTTTAGACTTTGTATTTTTGGATTCTTTTAAAGATATATATATCTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAGACTTTGTATTTTTGGATTCTTTTAAAGATATATATATCTTTA  250

seq1  TAAATATATATATAAGTATATATATATAAAGTATATATATATATATACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATATATATAAGTATATATATATAAAGTATATATATATATATACTG  300

seq1  TTCTTGTCTTCAGACACACCAGAAGAGGGCATCAGAACCTATTAGAGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTCTTCAGACACACCAGAAGAGGGCATCAGAACCTATTAGAGATG  350

seq1  TTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAA  400

seq1  AAGCAGTCAGTGCTCTTAACCTCTTTGCCATCTCTCCAGCCCCATGTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTCAGTGCTCTTAACCTCTTTGCCATCTCTCCAGCCCCATGTTCT  450

seq1  ACTTTTAAAAATAAATCTGTTCTTAATATTTATTTTGTTTTATGAGTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTAAAAATAAATCTGTTCTTAATATTTATTTTGTTTTATGAGTATC  500

seq1  TGTGCATGGGTGCACTTGAACCAGTGGATATGAGAGGAATGTATCAGATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATGGGTGCACTTGAACCAGTGGATATGAGAGGAATGTATCAGATC  550

seq1  CCCCAGAACTGGGGATAGAGGAGGTTGTAAGCCCTTACTTGAGTTCTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGAACTGGGGATAGAGGAGGTTGTAAGCCCTTACTTGAGTTCTGTG  600

seq1  TACTGAATTCAGAGTCTTTGCAAGAGAAGAATGTGCTCCTAACAGATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAATTCAGAGTCTTTGCAAGAGAAGAATGTGCTCCTAACAGATGAA  650

seq1  CCCTCTCTCCAGCCACCCACTATGACCTACTATTTATTATTTTCCCACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTCTCCAGCCACCCACTATGACCTACTATTTATTATTTTCCCACTA  700

seq1  CGGACTCAAAGTGATATCCTCTGAGTTTTATTATTTTATGCAGATGAAAG  750
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CGGACTCAAAGTGATATCCTCTGAGTTTTATTATTTTATGCAGATG-AAG  749

seq1  AATATACCCCAGTATAATTTTAAATTCATGGTGTACATCAGAGCCAAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AATATACCCCAGTATAATTTTAAATTCATGGTGTACATCAGAGCC-AGAC  798

seq1  TGGAGCCTACGTTCCAAGCAAGAAACATCAGTAGGGTTGTTTGGGGAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCCTACGTTCCAAGCAAGAAACATCAGTAGGGTTGTTTGGGGAAGG  848

seq1  CATTGTTCACAAAAATAAAGCATTGACATTGTTTTTGTTGCAACTGTGCT  900
      || ||||||||||||| |||||||||||||||||||||||| ||||||||
seq2  CA-TGTTCACAAAAAT-AAGCATTGACATTGTTTTTGTTGC-ACTGTGCT  895

seq1  ACAACTGTTGAAGCATCTCTTTCCTTCATCCAATAGCAATGTATTTTCAA  950
      || |||||   |||||||||| | ||||| || || | ||||| ||||||
seq2  AC-ACTGT--GAGCATCTCTTACGTTCAT-CAGTA-CCATGTA-TTTCAA  939

seq1  GTATATTATGTCTGT  965
      || ||||||||||||
seq2  GT-TATTATGTCTGT  953