BAC Information

Click to search

BAC

Clone NameB6Ng01-128O01
Chromosome1 (Build37)
Map Location 70,276,184 - 70,276,957
singlet/doubletsinglet
Overlap geneSpag16
Upstream geneEG241084, Ikzf2
Downstream geneA830006F12Rik, LOC100043210, EG667884, EG666083, LOC100042804, LOC100042809, Bard1, LOC667900
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128O01.bB6Ng01-128O01.g
ACCDH930613DH930614
length1,153775
definitionDH930613|Mus musculus domesticus DNA, BAC clone: B6Ng01-128O01, 5' end.DH930614|Mus musculus domesticus DNA, BAC clone: B6Ng01-128O01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatatcgaatggctgagaagcacctgaaaatttt
ttcaacatccttaatcatcagggaaattcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaacatcaaaaattcaggtgacagc
agatgctgtcaaggatgtggagaaagaggaacactcttccattgttggtg
ggattgcaagcttgtgcaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactactggaggatcccgcaatacctctcctgggc
atatatccagaagatgttccaactggtaagaaggacacatgctccactat
gttcattagcagaagctggaaataacccagatgcccctcaacagaggaat
ggatacagaaaatgtggtacatttacacaatggaatactactcagctatt
aaaaagaatgaatttatgaaattcctaggcaaatggatggacctggaggg
catcatcttgagtgaggtaacccaaccacaaaagaactcgcacaatatat
actcactgataagtggatattagcccagaaacttagaatacccaagatat
aagatacaatttgctaaacgcatgaaactcaagaacgaagaccaaagtgt
ggacactttgccccttcttagaattgggaacaaaacacccatggaaggag
tgacagagacaacgtttggagctgagacgaaaggatggaaccatctagag
cctgccatatccggggatccatcccataattggcctccaaacgttgacac
cattgcatacactagaaagattttcctgaaaggacccagatatggctgtt
ttcttgtgagactatgccggagcctggcaaacatagaagtggatgctcac
agtcagctattggatcgatcacagggcccccaatggaggagctagagaaa
gtacccaaggagcagaaggatctgcaatcctataggcagacacatatgac
taactatacccgccacccccacccccggagcacgtgtctctagctgcaat
gatcagagatggcttagtcagcatcagtgaaagagagtcatgcgtgccac
tttatgccagtaagggacgcaggccagagtggagagttggtgggttaagg
gga
gaattctgtgttgttgtgcatataaaagtttagattcctcatctccgtta
atattttagtgacacagaattgattttcttttaaaatataaagtcatatt
tcctccaggtaggggctttaccatgacaaatctctttcccagaaggatat
ttagaaatataatctacatgtaatacagagagaaatgggaggattaactt
ctctaaaattacctgatctaagtttacatgtacaggtttgtacagaaatc
tgaacatggcatcaatttctcagatgtcatcaagctaacatgattttata
attgtttaaatattgaccacagcttaagtaccttccttagaaacttctta
gaaattaaaataattaatagtctatatccctaatattcaaatatgctcag
taaagttcagcagattttttattataaaacataatctgtagcttaagaat
cataagttaaaaacaatataggttccctgcattaatcttcatctctgatt
ttatgcaaatagaaaatgccctcagactgagggtttctaacatcatctct
aatgtgattctaatttcactcactggccaggactgatggagactaaatga
agtaatgatatctctgatcttgacactcactggctgtcactgttgacact
ggtttaggccaacctgaacagctgtggtggcctagcacatcactttccag
tggatggtacccaggaagtaggtgtagaatgttagacatgggagtaaaac
atgagtcaaaacacttcactgacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_70276184_70276957
seq2: B6Ng01-128O01.g_67_841

seq1  GAATTCTGTGTTGTTGTGCATATAAAAGTTTAGATTCCTCATCTCCGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGTTGTTGTGCATATAAAAGTTTAGATTCCTCATCTCCGTTA  50

seq1  ATATATTAGTGACACAGAATTGATTTTCTTTTAAAATATAAAGTCATATT  100
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTAGTGACACAGAATTGATTTTCTTTTAAAATATAAAGTCATATT  100

seq1  TCCTCCAGGTAGGGGCTTTACCATGACAAATCTCTTTCCCAGAAGGATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCAGGTAGGGGCTTTACCATGACAAATCTCTTTCCCAGAAGGATAT  150

seq1  TTAGAAATATAATCTACATGTAATACAGAGAGAAATGGGAGGATTAACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAATATAATCTACATGTAATACAGAGAGAAATGGGAGGATTAACTT  200

seq1  CTCTAAAATTACCTGATCTAAGTTTACATGTACAGGTTTGTACAGAAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAATTACCTGATCTAAGTTTACATGTACAGGTTTGTACAGAAATC  250

seq1  TGAACATGGCATCAATTTCTCAGATGTCATCAAGCTAACATGATTTTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATGGCATCAATTTCTCAGATGTCATCAAGCTAACATGATTTTATA  300

seq1  ATTGTTTAAATATTGACCACAGCTTAAGTACCTTCCTTAGAAACTTCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTAAATATTGACCACAGCTTAAGTACCTTCCTTAGAAACTTCTTA  350

seq1  GAAATTAAAATAATTAATAGTCTATATCCCTAATATTCAAATATGCTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTAAAATAATTAATAGTCTATATCCCTAATATTCAAATATGCTCAG  400

seq1  TAAAGTTCAGCAGATTTTTTATTATAAAACATAATCTGTAGCTTAAGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTCAGCAGATTTTTTATTATAAAACATAATCTGTAGCTTAAGAAT  450

seq1  CATAAGTTAAAAACAATATAGGTTCCCTGCATTAATCTTCATCTCTGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGTTAAAAACAATATAGGTTCCCTGCATTAATCTTCATCTCTGATT  500

seq1  TTATGCAAATAGAAAATGCCCTCAGACTGAGGGTTTCTAACATCATCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCAAATAGAAAATGCCCTCAGACTGAGGGTTTCTAACATCATCTCT  550

seq1  AATGTGATTCTAATTTCACTCACTGGCCAGGACTGATGGAGACTAAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGATTCTAATTTCACTCACTGGCCAGGACTGATGGAGACTAAATGA  600

seq1  AGTAATGATATCTCTGATCTTGACACTCACTGGCTGTCACTGTTGACACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGATATCTCTGATCTTGACACTCACTGGCTGTCACTGTTGACACT  650

seq1  GG-TTAGGCCAACCTGAACAGCTGTGGTGGCCTAGCACATCACTTTCCAG  699
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAGGCCAACCTGAACAGCTGTGGTGGCCTAGCACATCACTTTCCAG  700

seq1  TGGATGGTACCCAGGAAGTAGGTGTAGAATGTAAGACATGGGAGTAAAAC  749
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGGATGGTACCCAGGAAGTAGGTGTAGAATGTTAGACATGGGAGTAAAAC  750

seq1  ATGAGTCAAAACACTTCACTGACAC  774
      |||||||||||||||||||||||||
seq2  ATGAGTCAAAACACTTCACTGACAC  775