BAC Information

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BAC

Clone NameB6Ng01-129D14
Chromosome1 (Build37)
Map Location 76,065,610 - 76,245,941
singlet/doubletdoublet
Overlap genenone
Upstream geneNhej1, Slc23a3, 1810031K17Rik, BC038286, Zfand2b, Abcb6, Atg9a, D1Ertd161e, Stk16, Tuba4a, A630095N17Rik, Dnajb10, Ptprn, Resp18, Dnpep, Des, Speg, Gmppa, Accn4, D1Bwg1363e, A230078I05Rik, AW822216, Inha, Stk11ip, Slc4a3, LOC100039069, LOC383531
Downstream geneLOC100039137, Tfdp1-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129D14.bB6Ng01-129D14.g
ACCDH930866DH930867
length1,09450
definitionDH930866|Mus musculus domesticus DNA, BAC clone: B6Ng01-129D14, 5' end.DH930867|Mus musculus domesticus DNA, BAC clone: B6Ng01-129D14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,065,610 - 76,066,714)(76,245,892 - 76,245,941)
sequence
gaattcaatcatgttttcctggagccacgtgacccctttcctctggtacc
tcacactctctggtggcttgctcatttcttatgtcggggactcaagggtt
gatttgtatccctagggacttgcactccagctaagatggagtagtgcctt
ccacgcttgccagacacctcagttcttcccggcaagacatctgaccccat
ttcctagtcttcccctggcttgttctattcctgtcaacatgattgcctct
tgtggatgtttgaatactataacatttggttagatggtccatgtctggaa
attccttccccagggagctcagaaacaacccactcagcatctctgtctaa
atttcacttctcatccacgatgccagtgccaagctataactgcccttgcc
ctgttacacatatgtgactggatgtcctttgcttgctccacccccacacc
atctattggcttccaggacactgtaatttatttctccgtctcgtcttcct
gtttgttcactgtttacatacacctactcctctgtcattggtaaagtaag
ccctcctcaggccgtcatctgatctgctttcttcactgacgtgacctgag
tactcacaggcggttcacattagctatttgttgatgtttgttggacagtg
tttcatgaagaaattgcttggagttcttgtcatatgtttgcatgtcagcc
aaaggcaacttccagcgaagtaagaactgagtggaaaggtgaattccaca
aatttacctcacgagccttattcctggaccattcacttggcctgctaata
atcctgaccctcgtgagacacaacaagaaagtgagtcctggccattgcct
gctgttctatagaagccacatgacttgtacttgggcttcatggaggcttt
aagtgagcagagcatctttggaaggcccagggatgttttgaaagttctgc
aactggtaaatgatatagaggaatctctcacatgaatctgatagccagtc
tttcttctcatcaagctagttttgggaccacaagagaagtcaaggcagaa
tgctgggatgacatcaagaaacaggaccacaaggaatccaggtt
tttggtttggggttttggttcttttattttgttctggcctcgtgtgtgtg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_76065610_76066714
seq2: B6Ng01-129D14.b_49_1142

seq1  GAATTCAATCATGTTTTCCTGGAGCCACGTGACCCCTTTCCTCTGGTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCATGTTTTCCTGGAGCCACGTGACCCCTTTCCTCTGGTACC  50

seq1  TCACACTCTCTGGTGGCTTGCTCATTTCTTATGTCGGGGACTCAAGGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACTCTCTGGTGGCTTGCTCATTTCTTATGTCGGGGACTCAAGGGTT  100

seq1  GATTTGTATCCCTAGGGACTTGCACTCCAGCTAAGATGGAGTAGTGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTATCCCTAGGGACTTGCACTCCAGCTAAGATGGAGTAGTGCCTT  150

seq1  CCACGCTTGCCAGACACCTCAGTTCTTCCCGGCAAGACATCTGACCCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGCTTGCCAGACACCTCAGTTCTTCCCGGCAAGACATCTGACCCCAT  200

seq1  TTCCTAGTCTTCCCCTGGCTTGTTCTATTCCTGTCAACATGATTGCCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGTCTTCCCCTGGCTTGTTCTATTCCTGTCAACATGATTGCCTCT  250

seq1  TGTGGATGTTTGAATACTATAACATTTGGTTAGATGGTCCATGTCTGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGATGTTTGAATACTATAACATTTGGTTAGATGGTCCATGTCTGGAA  300

seq1  ATTCCTTCCCCAGGGAGCTCAGAAACAACCCACTCAGCATCTCTGTCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTCCCCAGGGAGCTCAGAAACAACCCACTCAGCATCTCTGTCTAA  350

seq1  ATTTCACTTCTCATCCACGATGCCAGTGCCAAGCTATAACTGCCCTTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACTTCTCATCCACGATGCCAGTGCCAAGCTATAACTGCCCTTGCC  400

seq1  CTGTTACACATATGTGACTGGATGTCCTTTGCTTGCTCCACCCCCACACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTACACATATGTGACTGGATGTCCTTTGCTTGCTCCACCCCCACACC  450

seq1  ATCTATTGGCTTCCAGGACACTGTAATTTATTTCTCCGTCTCGTCTTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTGGCTTCCAGGACACTGTAATTTATTTCTCCGTCTCGTCTTCCT  500

seq1  GTTTGTTCACTGTTTACATACACCTACTCCTCTGTCATTGGTAAAGTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTCACTGTTTACATACACCTACTCCTCTGTCATTGGTAAAGTAAG  550

seq1  CCCTCCTCAGGCCGTCATCTGATCTGCTTTCTTCACTGACGTGACCTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCTCAGGCCGTCATCTGATCTGCTTTCTTCACTGACGTGACCTGAG  600

seq1  TACTCACAGGCGGTTCACATTAGCTATTTGTTGATGTTTGTTGGACAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCACAGGCGGTTCACATTAGCTATTTGTTGATGTTTGTTGGACAGTG  650

seq1  TTTCATGAAGAAATTGCTTGGAGTTCTTGTCATATGTTTGCATGTCAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGAAGAAATTGCTTGGAGTTCTTGTCATATGTTTGCATGTCAGCC  700

seq1  AAAGGCAACTTCCAGCGAAGTAAGAACTGAGTGGAAAGGTGAATTCCACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAACTTCCAGCGAAGTAAGAACTGAGTGGAAAGGTGAATTCCACA  750

seq1  AATTTACCTCAGGAGCCTTATTCCTGGACCATTCACTTGGCCTGCTAATA  800
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AATTTACCTCACGAGCCTTATTCCTGGACCATTCACTTGGCCTGCTAATA  800

seq1  ATCCTGACCCTCGTGAGACACAACAAGAAAGTGAGTCCTGGCCATTGCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGACCCTCGTGAGACACAACAAGAAAGTGAGTCCTGGCCATTGCCT  850

seq1  GCTGTTCTATAGAAGCCACATGACTTGTACTTGGGCTTCATGGAGGCTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTCTATAGAAGCCACATGACTTGTACTTGGGCTTCATGGAGGCTTT  900

seq1  AAGTGAGCAGAGCATCTTTGGAAGGCCCAGGGATGTTTTGAAAGTTCTGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGCAGAGCATCTTTGGAAGGCCCAGGGATGTTTTGAAAGTTCTGC  950

seq1  AACTGGTAAATGATATAGAGGAATCTCTCACCATGAATCCTGATAGCCAG  1000
      |||||||||||||||||||||||||||||| ||||||| |||||||||||
seq2  AACTGGTAAATGATATAGAGGAATCTCTCA-CATGAAT-CTGATAGCCAG  998

seq1  TCTTTTCCTTCTTCATCCAAGCTAGTTTTGGGACCCACAAGAGGAAGGTC  1050
      |||||  |||| |||| |||||||||||||||| |||||||||  | |||
seq2  TCTTT--CTTC-TCAT-CAAGCTAGTTTTGGGA-CCACAAGAG--AAGTC  1041

seq1  AAGGCAGAATGGCTGGGATGACATCCAGAAACAGGGACCACAGGGATTCC  1100
      |||||||||| |||||||||||||| ||||||| |||||||| ||| |||
seq2  AAGGCAGAAT-GCTGGGATGACATCAAGAAACA-GGACCACAAGGAATCC  1089

seq1  AGGTT  1105
      |||||
seq2  AGGTT  1094

seq1: chr1_76245892_76245941
seq2: B6Ng01-129D14.g_75_124 (reverse)

seq1  CACACACACGAGGCCAGAACAAAATAAAAGAACCAAAACCCCAAACCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACGAGGCCAGAACAAAATAAAAGAACCAAAACCCCAAACCAAA  50