BAC Information

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BAC

Clone NameB6Ng01-129G09
Chromosome1 (Build37)
Map Location 67,738,587 - 67,929,283
singlet/doubletdoublet
Overlap genenone
Upstream geneRpe, 1110028C15Rik, Acadl, Myl1, LOC100043192, Lancl1, Cps1, Kif22-ps
Downstream geneErbb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129G09.bB6Ng01-129G09.g
ACCDH930990DH930991
length9251,142
definitionDH930990|Mus musculus domesticus DNA, BAC clone: B6Ng01-129G09, 5' end.DH930991|Mus musculus domesticus DNA, BAC clone: B6Ng01-129G09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,928,357 - 67,929,283)(67,738,587 - 67,739,455)
sequence
gaattctttcttttcctattctccaatcatatctattatgcaacagtcca
tctatttcactagattatagtcattttgtgtttgtctttgttttcccaga
aatttaaaactacttgaaaataaagaatattattttatttattcaatttt
atattagaatcattttaaagttgacaaactatcattcaatgtttgtatgg
agttcaacgtgtgcaatgtgatgttttcctgtgtatatgcagtataaaat
gactaggtcaagctagttaacacatcatcttgattgcatatctctttttt
gagataaaacattatttgaaattgactctcttgtttattttgtcagaggc
atacataatttggtgaatacatgatactatgcaatagatttaaaaatata
tccatcatgtctgaaattttgttctctttggccagtaacggtccattctc
tcattccttcatctcttataaccatggttctcctttctacagacataaac
gagataataaatggttaatcttttgctttcatcttgacattgagcacact
gctttgtataaagaacccagtgagtgacaaagaatgtaaattcagaggaa
ctgatcaaatattcaatttcagccctaattatttaatatagacttaggca
aaatcattttataccatgatgtctatttaaaaaatgactcaagccatagt
cacctgaataatatattgtaggtattcttgtaacagctcgaggttcatac
aaactgatacactaaggtgaacgtacagttgaattgctcctgggaatttt
ttcatttgtgtaagaaaaagcataataataaaaggaagatgagaaaaccg
gaggtaggggggcattttgataaaaatggaaatgtctataggaaatttga
ttactttattacatggtattatcct
gaattctgtaacagcacatgttggtgagaatgtggagaaaggaacacccc
tccattgctggtgggattgcaagctggtacaaccactctggaaatctgtc
tggcagttcctcagaaaactggacatagtattaccagaggacccagctat
ctcagtcctggacatatacctagatgctctaacatataataagaacacat
gcttcactatgttcatagcagtcatatgtcccttaacagaggaatggata
caaaaaatgtggtacatttacaaaatggaatactgtgggaagccacatgt
gccgttgcagagtggtgctggctactgctggccaccatgcataagtttgg
acaaacaaccaatgtgtacatatgcagtaaaccttttttccaagtcactg
cctggcccgggcatgttaatgaggtacggagaatataaccaatcagatgt
gagacatgcaaatgaggtatgttaatgaggttctgtgaggtactgagaga
gagagtagccaatcagatgaggaacatgcaaatgaggcatagtgcataac
caatccgggtgtgagacatgcctctcctaggcctatataagcagcaccag
ttctgggctggtgtctcttcgcctctgcaatcaagctctcccagtaaacg
tgtgcagaaggatcctgttgcagcggttctttctggtcgagtcgggcgcg
cgcaagagaatactactcagctattaaaaacaatgactttcttgaagttg
gcaggcatgtggatgaaactaaaaaaatatcctgagtgaggtaagtcaga
cccaaaagtattttttaaagaaatgttaaaatcaattaataaaaatgaaa
ggtcttttaactaaagaacatcaattttattaataaaacctttttctcta
gatgattatcttttgattttgttgagtaagctgccaatatacatagatca
gtataaatgatacggctgggaaatgcttttcaattctcaggttggagctt
tacctctaaggcacttgtttgcaaggatcatttcatttgtaagctaatat
aattaagttaaatggaatattagtaatttgcgatttctgaaccggactat
acccaaagtacgaacctaatatttgggagacctggaatgttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_67928357_67929283
seq2: B6Ng01-129G09.b_43_967 (reverse)

seq1  AGGATAATA-CATGTAATAAAGTTAATCAAATTTCCTATAGACATTTCCA  49
      ||||||||| |||||||||||| |||||||||||||||||||||||||||
seq2  AGGATAATACCATGTAATAAAG-TAATCAAATTTCCTATAGACATTTCCA  49

seq1  TTTTTATCAAAAATGCCCCCCTACCTCCGGTTTTCTCATCTTTCCTTTTA  99
      |||||||| ||||||||||||||||||||||||||||||| |||||||||
seq2  TTTTTATC-AAAATGCCCCCCTACCTCCGGTTTTCTCATC-TTCCTTTTA  97

seq1  TTATTATGCTTTTTCTTACACAAATGAAAAAATTCCCAGGAGCAATTCAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATGCTTTTTCTTACACAAATGAAAAAATTCCCAGGAGCAATTCAA  147

seq1  CTGTACGTTCACCTTAGTGTATCAGTTTGTATGAACCTCGAGCTGTTACA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACGTTCACCTTAGTGTATCAGTTTGTATGAACCTCGAGCTGTTACA  197

seq1  AGAATACCTACAATATATTATTCAGGTGACTATGGCTTGAGTCATTTTTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACCTACAATATATTATTCAGGTGACTATGGCTTGAGTCATTTTTT  247

seq1  AAATAGACATCATGGTATAAAATGATTTTGCCTAAGTCTATATTAAATAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGACATCATGGTATAAAATGATTTTGCCTAAGTCTATATTAAATAA  297

seq1  TTAGGGCTGAAATTGAATATTTGATCAGTTCCTCTGAATTTACATTCTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGCTGAAATTGAATATTTGATCAGTTCCTCTGAATTTACATTCTTT  347

seq1  GTCACTCACTGGGTTCTTTATACAAAGCAGTGTGCTCAATGTCAAGATGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTCACTGGGTTCTTTATACAAAGCAGTGTGCTCAATGTCAAGATGA  397

seq1  AAGCAAAAGATTAACCATTTATTATCTCGTTTATGTCTGTAGAAAGGAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAAGATTAACCATTTATTATCTCGTTTATGTCTGTAGAAAGGAGA  447

seq1  ACCATGGTTATAAGAGATGAAGGAATGAGAGAATGGACCGTTACTGGCCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGTTATAAGAGATGAAGGAATGAGAGAATGGACCGTTACTGGCCA  497

seq1  AAGAGAACAAAATTTCAGACATGATGGATATATTTTTAAATCTATTGCAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAACAAAATTTCAGACATGATGGATATATTTTTAAATCTATTGCAT  547

seq1  AGTATCATGTATTCACCAAATTATGTATGCCTCTGACAAAATAAACAAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCATGTATTCACCAAATTATGTATGCCTCTGACAAAATAAACAAGA  597

seq1  GAGTCAATTTCAAATAATGTTTTATCTCAAAAAAGAGATATGCAATCAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAATTTCAAATAATGTTTTATCTCAAAAAAGAGATATGCAATCAAG  647

seq1  ATGATGTGTTAACTAGCTTGACCTAGTCATTTTATACTGCATATACACAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTGTTAACTAGCTTGACCTAGTCATTTTATACTGCATATACACAG  697

seq1  GAAAACATCACATTGCACACGTTGAACTCCATACAAACATTGAATGATAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACATCACATTGCACACGTTGAACTCCATACAAACATTGAATGATAG  747

seq1  TTTGTCAACTTTAAAATGATTCTAATATAAAATTGAATAAATAAAATAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCAACTTTAAAATGATTCTAATATAAAATTGAATAAATAAAATAAT  797

seq1  ATTCTTTATTTTCAAGTAGTTTTAAATTTCTGGGAAAACAAAGACAAACA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTATTTTCAAGTAGTTTTAAATTTCTGGGAAAACAAAGACAAACA  847

seq1  CAAAATGACTATAATCTAGTGAAATAGATGGACTGTTGCATAATAGATAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGACTATAATCTAGTGAAATAGATGGACTGTTGCATAATAGATAT  897

seq1  GATTGGAGAATAGGAAAAGAAAGAATTC  927
      ||||||||||||||||||||||||||||
seq2  GATTGGAGAATAGGAAAAGAAAGAATTC  925

seq1: chr1_67738587_67739455
seq2: B6Ng01-129G09.g_366_1210

seq1  TGTGCCGTTGCAGAGTGGTGCTGGCTACTGCTGGCCACCATGCATAAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCGTTGCAGAGTGGTGCTGGCTACTGCTGGCCACCATGCATAAGTT  50

seq1  TGGACAAACAACCAATGTGTACATATGCAGTAAACCTTTTTTCCAAGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAAACAACCAATGTGTACATATGCAGTAAACCTTTTTTCCAAGTCA  100

seq1  CTGCCTGGCCCGGGCATGTTAATGAGGTACGGAGAATATAACCAATCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGGCCCGGGCATGTTAATGAGGTACGGAGAATATAACCAATCAGA  150

seq1  TGTGAGACATGCAAATGAGGTATGTTAATGAGGTTCTGTGAGGTACTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGACATGCAAATGAGGTATGTTAATGAGGTTCTGTGAGGTACTGAG  200

seq1  AGAGAGAGTAGCCAATCAGATGAGGAACATGCAAATGAGGCATAGTGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGTAGCCAATCAGATGAGGAACATGCAAATGAGGCATAGTGCAT  250

seq1  AACCAATCCGGGTGTGAGACATGCCTCTCCTAGGCCTATATAAGCAGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAATCCGGGTGTGAGACATGCCTCTCCTAGGCCTATATAAGCAGCAC  300

seq1  CAGTTCTGGGCTGGTGTCTCTTCGCCTCTGCAATCAAGCTCTCCCAGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTGGGCTGGTGTCTCTTCGCCTCTGCAATCAAGCTCTCCCAGTAA  350

seq1  ACGTGTGCAGAAGGATCCTGTTGCAGCGGTTCTTGCTGGTCGAGTCGGGC  400
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACGTGTGCAGAAGGATCCTGTTGCAGCGGTTCTTTCTGGTCGAGTCGGGC  400

seq1  GCGCGCAAGAGAATACTACTCAGCTATTAAAAACAATGAC-TTCTTGAAG  449
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GCGCGCAAGAGAATACTACTCAGCTATTAAAAACAATGACTTTCTTGAAG  450

seq1  TTGGCAGGCATGTGGATGAAACTAAAAAAATATCCTGAGTGAGGTAAGTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAGGCATGTGGATGAAACTAAAAAAATATCCTGAGTGAGGTAAGTC  500

seq1  AGACCCAAAAGTATTTTTTAAAGAAATGTTAAAATCAATTAATAAAAATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCAAAAGTATTTTTTAAAGAAATGTTAAAATCAATTAATAAAAATG  550

seq1  AAAAGGTCTTTTAACTAAAGAACATCAATTTTATTAATAAAACCTTTTCT  599
       ||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  -AAAGGTCTTTTAACTAAAGAACATCAATTTTATTAATAAAACCTTTT-T  598

seq1  CT-TAGAAGATTATTCTTTTGATTTTGTTGAGGTAAGCTGCCAATATACA  648
      || |||| ||||| ||||||||||||||||| ||||||||||||||||||
seq2  CTCTAGATGATTA-TCTTTTGATTTTGTTGA-GTAAGCTGCCAATATACA  646

seq1  TAGATCAGTATAAAATGATACGGCTGGGAAAATGCTTTTCAAAATTCTCA  698
      ||||||||||| |||||||||||||||| |||||||||||  ||||||| 
seq2  TAGATCAGTAT-AAATGATACGGCTGGG-AAATGCTTTTC--AATTCTC-  691

seq1  AGGTTTGAGCTTTAACCTCTAGGCAACTTGTTTGCAAAGGATCAATTTCA  748
      ||||| ||||||| ||||||| |  |||||||||| ||||||| ||||||
seq2  AGGTTGGAGCTTT-ACCTCTAAGGCACTTGTTTGC-AAGGATC-ATTTCA  738

seq1  TTTGTAAGGCTAAATTAAAATTAAGTTTATAATGGATATATTAGTGATAT  798
      ||||||| |||||  || |||||||||   |||||| ||||||||   ||
seq2  TTTGTAA-GCTAA--TATAATTAAGTT--AAATGGA-ATATTAGT--AAT  780

seq1  TTGGATTTTCTGAAACTGAGTTAATACCAAAATGAATCAGACTCAAATAT  848
      |||   |||||||| | || |  ||||| ||   | |  ||  | |||||
seq2  TTGCGATTTCTGAACCGGACT--ATACCCAA---AGTACGAACCTAATAT  825

seq1  TTGGGAGAACCTGGAATGTTC  869
      ||||||| |||||||||||||
seq2  TTGGGAG-ACCTGGAATGTTC  845