BAC Information

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BAC

Clone NameB6Ng01-133D02
Chromosome1 (Build37)
Map Location 80,859,309 - 80,860,045
singlet/doubletsinglet
Overlap genenone
Upstream geneEG433326, LOC665064, LOC100039325, A830043J08Rik, 2310015K22Rik, Cul3, EG620899, 1700016L21Rik, Dock10
Downstream geneLOC665092, 9430031J16Rik, EG621020, LOC433328, EG665145
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133D02.bB6Ng01-133D02.g
ACCDH933802DH933803
length1,241738
definitionDH933802|Mus musculus domesticus DNA, BAC clone: B6Ng01-133D02, 5' end.DH933803|Mus musculus domesticus DNA, BAC clone: B6Ng01-133D02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacttgaggaataccgaatgggtaagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatacaaatcaaaacaacctgagatt
tcacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagca
gatgctgtcgaggatgtggagaaagaagaacactcctccatttttggtgg
gattgcaagcttgtacaaccactctggaaatcagtctggaagttcctcag
aaaattggatgtagtactactggaggatcccgaaatacctcttctggaca
tatatccagaagatattccaacaagtaagaaggacacatgctcccctatg
ttcatagaagccttatttataatagccagaagctgggaagaacccagatg
ctcctcaacagaggaatggatacagaaattatggtacatttacacaatgg
agtgctactcagctattaaaaagaatgaatttgtgaaattcgtaggcaaa
tggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaaa
gaactcacatgatatgtactcactgataattggatagtagcccagaaact
tagaatacccaagatataaaatgcaatttgcaaaacacatgaaactcaag
aagaaggaaaaccaaagtgtggacactttgctccttcttagaattggaaa
caaaacacccatggaaggagttacagagacacagtttggagctgagatga
aaagatgaaccatctagagactgccatatctgcggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttgctgaaa
ggacccatatatagctgtttcttgtgagactatgccagcacctagcaaac
acagaagtggatgctcacaatcagctattggatggatcacagggccccaa
tggagagctattgaaagtacccaagtagctaaagcggtctgcaccctcta
gttggacacaatatgactacagtaccccagagctcgtgtctctagctgca
tatgtatcagagatgtctagtcgcatcatgcaaggaaggcccatgctgtg
caatttatatggcctcagtaagggggtcagcactctggtggatacggctt
ggaggcgaatgcaaaagctcttatgaaatcattgaacttcctctggaatc
tggcgaagccaccttcaattggatgcggatgtgtcaagtga
gaattcctaactaagtcttctatttttccatatgcatttttattccaaaa
ctgtagtaatcatgcaattttcttgctaggtaggtaaaatggttacctgt
ctaagaaaaaaggcttcaaccgttcagtgtgtatgcagagctgtctacag
atgagggagatattttttttttgtcatcaaaagtatcacctcttttccat
atatttaattgtgggctattattgtgatttgtattctccataaatgtgac
aaggaggataattttttcaaagatttatttattattttatataagtacac
tgtagatgccttcagatgcaccagaagagggcaggtgtcagatctcatta
tgggtgattgtgagccaccatgtggttgctgggatttgagctgaggacct
tcggaagagcagtcagtgctcttcaccactgagccatcttgccagcccta
gttttgtttttttgttttgttttctacagaattcttcattaaatattttc
tttatatacatttcaaatgctatcccgaacattccctttagccccacccc
ccaccccccacccacccactcccacttcttggccctggcattcccctgta
ctggagcatataaagtttgcaataccaaggggcctctttttcccagtgat
ggtcgagtatgccatcttctgctacttatgcagctagagacacaagctct
tggggttctggtaagttcatatggttgttccacttata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_80859309_80860045
seq2: B6Ng01-133D02.g_68_805

seq1  GAATTCCTAACTAAGTCTTCTATTTTTCCATATGCATTTTTATTCCAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAACTAAGTCTTCTATTTTTCCATATGCATTTTTATTCCAAAA  50

seq1  CTGTAGTAATCATGCAATTTTCTTGCTAGGTAGGTAAAATGGTTACCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGTAATCATGCAATTTTCTTGCTAGGTAGGTAAAATGGTTACCTGT  100

seq1  CTAAGAAAAAAGGCTTCAACCGTTCAGTGTGTATGCAGAGCTGTCTACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAAAAAAGGCTTCAACCGTTCAGTGTGTATGCAGAGCTGTCTACAG  150

seq1  ATGAGGGAGATATTTTTTTTTTGTCATCAAAAGTATCACCTCTTTTCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGGAGATATTTTTTTTTTGTCATCAAAAGTATCACCTCTTTTCCAT  200

seq1  ATATTTAATTGTGGGCTATTATTGTGATTTGTATTCTCCATAAATGTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAATTGTGGGCTATTATTGTGATTTGTATTCTCCATAAATGTGAC  250

seq1  AAGGAGGATAATTTTTTCAAAGATTTATTTATTATTTTATATAAGTACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGATAATTTTTTCAAAGATTTATTTATTATTTTATATAAGTACAC  300

seq1  TGTAGATGCCTTCAGATGCACCAGAAGAGGGCAGGTGTCAGATCTCATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATGCCTTCAGATGCACCAGAAGAGGGCAGGTGTCAGATCTCATTA  350

seq1  TGGGTGATTGTGAGCCACCATGTGGTTGCTGGGATTTGAGCTGAGGACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGATTGTGAGCCACCATGTGGTTGCTGGGATTTGAGCTGAGGACCT  400

seq1  TCGGAAGAGCAGTCAGTGCTCTTCACCACTGAGCCATCTTGCCAGCCCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGAAGAGCAGTCAGTGCTCTTCACCACTGAGCCATCTTGCCAGCCCTA  450

seq1  GTTTTGTTTTTTTGTTTTGTTTTCTACAGAATTCTTCATTAAATATTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTTTTGTTTTGTTTTCTACAGAATTCTTCATTAAATATTTTC  500

seq1  TTTATATACATTTCAAATGCTATCCCGAACATTCCCTTTAGCCCCACCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATACATTTCAAATGCTATCCCGAACATTCCCTTTAGCCCCACCCC  550

seq1  CCACCCCCCACCCACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCCCACCCACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTA  600

seq1  CTGGAGCATATAAAGTTTGCAATACCAAGGGGCCTC-TTTTCCCAGTGAT  649
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTGGAGCATATAAAGTTTGCAATACCAAGGGGCCTCTTTTTCCCAGTGAT  650

seq1  GGTCGAGTAGGCCATCTTCTGCTACATATGCAGCTAGAGACACAAGCTCT  699
      ||||||||| ||||||||||||||| ||||||||||||||||||||||||
seq2  GGTCGAGTATGCCATCTTCTGCTACTTATGCAGCTAGAGACACAAGCTCT  700

seq1  TGGGGTACTGGTTAGTTCATATTGTTGTTCCACCTATA  737
      |||||| ||||| ||||||||| |||||||||| ||||
seq2  TGGGGTTCTGGTAAGTTCATATGGTTGTTCCACTTATA  738