BAC Information

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BAC

Clone NameB6Ng01-133G10
Chromosome1 (Build37)
Map Location 91,065,955 - 91,157,430
singlet/doubletdoublet
Overlap geneLOC383542
Upstream geneUgt1a@, Ugt1a10, Ugt1a9, Ugt1a7c, Ugt1a6a, Ugt1a6b, Ugt1a5, Ugt1a2, Dnajb3, Ugt1a1, LOC100040766, 6430706D22Rik, LOC100038822, Trpm8, Spp2, Glrp1, Arl4c, LOC100040127, 2410088K16Rik, LOC208347, Sh3bp4
Downstream geneEG665688, Centg2, Gbx2, Asb18, Iqca, Cxcr7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133G10.bB6Ng01-133G10.g
ACCDH933957DH933958
length535967
definitionDH933957|Mus musculus domesticus DNA, BAC clone: B6Ng01-133G10, 5' end.DH933958|Mus musculus domesticus DNA, BAC clone: B6Ng01-133G10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,156,890 - 91,157,430)(91,065,955 - 91,066,928)
sequence
attggaaaacaaaacaaaacatctctccttctgggcaaggagcagagtgg
actatatatccatctccaccccttctctggagcagattgcaaaccctggc
tttcttccacatgactcctcagagcctcttagtggactgtgagaagggga
cttagaacaatgtcacatggctttgctaacagaccaagttctagcagagg
actcacagaggcaaccataaaagggcccccaccctcctcgatactgtcca
aaggagagcgggagatttcataataaacggagttgcatctttagtctaga
accaggccctgtcaccccggataaagccaacacagccacaaagtccgcat
gaacctatagacaagaaccgaaacgcaacgatccagagctgaggctgtag
tttagtggggagagtacttacctagcacacttgaagtcctgggttccatc
cgaagcactgcagatactgggtgtgatggtgcatctggttttaccggcac
tggagactggagataggagggaggtgagggagggg
gaattcccatacccagcatgctcaggtagtgcttcatgccctggcttgaa
gagattctccactgagcaaagtgctcgccacacaagcaggaagacttggc
tctccagaactcatgtaaaaagctggaggacatagctgcccacctgctgt
ctcacttggaaggatgtggagatagggaacacctggagcgagtcagcttg
ctgaaacatccctgaaagaccatacggagggtggaaggaggacaggacct
gacaccagcctcaacacacacacacacacacacacagaaacatagacaca
gacacacacagacacggaaacacagatacagacacacagacagacacaag
acacacatacatggaaacatagacacagacacacagacagacagacacac
acaaacagacacatgccttagggtttctattgttgcataaaacatcatga
ccaagaagcaagttggggaggagagggtttattcagtttacatttccaca
ctgctgttcatcaccaaaggaagtcatgacaggaactcatacagggaaaa
aagctggaggcaggatatgatgcagaggccatggagggatgctgcttact
ggcttgcttcccctggcttgctcagcttgctttcttataaaacccaggac
taccagcccagggatggcaccacccacaatgggccctccctcatcaatca
gtaattgagaaaatgccttacagctggatctcatggaggcatttcctcaa
atggcgcgtgtgccatttgaaagttagaaagcaactctgcagagttgatt
ctcccttccaccattatgtgggtttggggatcaagccaggcggcaaggct
tacacagtgaacattttcacttacccgccatgttgcttctgccccaaaaa
gggtttactataagctttttgtgtttttttggcttttaagaatttaattt
atacgtatggagtgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_91156890_91157430
seq2: B6Ng01-133G10.b_46_586 (reverse)

seq1  CCCCTCCCTCACCTCCCTCCTATCTCCAGTCTCCAGTGCCGGTAAAACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCCTCACCTCCCTCCTATCTCCAGTCTCCAGTGCCGGTAAAACCA  50

seq1  GATGCACCATCACACCCAGTATCTGCAGTGCTTCGGATGGAACCCAGGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCACCATCACACCCAGTATCTGCAGTGCTTCGGATGGAACCCAGGAC  100

seq1  TTCAAGTGTGCTAGGTAAGTACTCTCCCCACTAAACTACAGCCTCAGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTGTGCTAGGTAAGTACTCTCCCCACTAAACTACAGCCTCAGCTC  150

seq1  TGGATCGTTGCGTTTCGGTTCTTGTCTATAGGTTCATGCGGACTTTGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCGTTGCGTTTCGGTTCTTGTCTATAGGTTCATGCGGACTTTGTGG  200

seq1  CTGTGTTGGCTTTATCCGGGGTGACAGGGCCTGGTTCTAGACTAAAGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTGGCTTTATCCGGGGTGACAGGGCCTGGTTCTAGACTAAAGATG  250

seq1  CAACTCCGTTTATTATGAAATCTCCCGCTCTCCTTTGGACAGTATCGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCCGTTTATTATGAAATCTCCCGCTCTCCTTTGGACAGTATCGAGG  300

seq1  AGGGTGGGGGCCCTTTTATGGTTGCCTCTGTGAGTCCTCTGCTAGAACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGGGGCCCTTTTATGGTTGCCTCTGTGAGTCCTCTGCTAGAACTT  350

seq1  GGTCTGTTAGCAAAGCCATGTGACATTGTTCTAAGTCCCCTTCTCACAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTTAGCAAAGCCATGTGACATTGTTCTAAGTCCCCTTCTCACAGT  400

seq1  CCACTAAGAGGCTCTGAGGAGTCATGTGGAAGAAAGCCAGGGTTTGCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTAAGAGGCTCTGAGGAGTCATGTGGAAGAAAGCCAGGGTTTGCAAT  450

seq1  CTGCTCCAGAGAAGGGGTGGAGATGGATATATAGTCCACTCTGCTCCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCAGAGAAGGGGTGGAGATGGATATATAGTCCACTCTGCTCCTTG  500

seq1  CCCAGAAGGAGAGATGTTTTGTTTTGTTTTCCAATGAATTC  541
      |||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAAGGAGAGATGTTTTGTTTTGTTTTCCAATGAATTC  541

seq1: chr1_91065955_91066928
seq2: B6Ng01-133G10.g_67_1033

seq1  GAATTCCCATACCCAGCATGCTCAGGTAGTGCTTCATGCCCTGGCTTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATACCCAGCATGCTCAGGTAGTGCTTCATGCCCTGGCTTGAA  50

seq1  GAGATTCTCCACTGAGCAAAGTGCTCGCCACACAAGCAGGAAGACTTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTCTCCACTGAGCAAAGTGCTCGCCACACAAGCAGGAAGACTTGGC  100

seq1  TCTCCAGAACTCATGTAAAAAGCTGGAGGACATAGCTGCCCACCTGCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGAACTCATGTAAAAAGCTGGAGGACATAGCTGCCCACCTGCTGT  150

seq1  CTCACTTGGAAGGATGTGGAGATAGGGAACACCTGGAGCGAGTCAGCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTGGAAGGATGTGGAGATAGGGAACACCTGGAGCGAGTCAGCTTG  200

seq1  CTGAAACATCCCTGAAAGACCATACGGAGGGTGGAAGGAGGACAGGACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAACATCCCTGAAAGACCATACGGAGGGTGGAAGGAGGACAGGACCT  250

seq1  GACACCAGCCTCAACACACACACACACACACACACAGAAACATAGACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCAGCCTCAACACACACACACACACACACACAGAAACATAGACACA  300

seq1  GACACACACAGACACGGAAACACAGATACAGACACACAGACAGACACAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACACAGACACGGAAACACAGATACAGACACACAGACAGACACAAG  350

seq1  ACACACATACATGGAAACATAGACACAGACACACAGACAGACAGACACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATACATGGAAACATAGACACAGACACACAGACAGACAGACACAC  400

seq1  ACAAACAGACACATGCCTTAGGGTTTCTATTGTTGCATAAAACATCATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAGACACATGCCTTAGGGTTTCTATTGTTGCATAAAACATCATGA  450

seq1  CCAAGAAGCAAGTTGGGGAGGAGAGGGTTTATTCAGTTTACATTTCCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAAGCAAGTTGGGGAGGAGAGGGTTTATTCAGTTTACATTTCCACA  500

seq1  CTGCTGTTCATCACCAAAGGAAGTCATGACAGGAACTCATACAGGGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTTCATCACCAAAGGAAGTCATGACAGGAACTCATACAGGGAAAA  550

seq1  AAGCTGGAGGCAGGATATGATGCAGAGGCCATGGAGGGATGCTGCTTACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGAGGCAGGATATGATGCAGAGGCCATGGAGGGATGCTGCTTACT  600

seq1  GGCTTGCTTCCCCTGGCTTGCTCAGCTTGCTTTCTTATAAAACCCAGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGCTTCCCCTGGCTTGCTCAGCTTGCTTTCTTATAAAACCCAGGAC  650

seq1  TACCAGCCCAGGGATGGCACCACCCACAATGGGCCCTCCCTCATCAATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGCCCAGGGATGGCACCACCCACAATGGGCCCTCCCTCATCAATCA  700

seq1  GTAATTGAGAAAATGCCTTACAGCTGGATCTCATGGAGGCATTTCCTCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTGAGAAAATGCCTTACAGCTGGATCTCATGGAGGCATTTCCTCAA  750

seq1  ATGGCGCGTGTGCCATTTGAAAGTTAGAAGGCAACTCTGCAGAGTTGATT  800
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATGGCGCGTGTGCCATTTGAAAGTTAGAAAGCAACTCTGCAGAGTTGATT  800

seq1  CTCCCTTCCACCATTATGTGGGTTTGGGGATCAAGCCAGGCGGCAAGGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTTCCACCATTATGTGGGTTTGGGGATCAAGCCAGGCGGCAAGGCT  850

seq1  TACACAGTGAACA-TTTCACTTACCCGCCATGTTGC-TCTGCCCCAAAAA  898
      ||||||||||||| |||||||||||||||||||||| |||||||| ||||
seq2  TACACAGTGAACATTTTCACTTACCCGCCATGTTGCTTCTGCCCC-AAAA  899

seq1  AGGGTTTACTATAAGCTTTTTTTTTTTTTTTTTTTTTTGGCTTTTTTAGA  948
      ||||||||||||||||       ||||| | |||||||||| |||| |||
seq2  AGGGTTTACTATAAGC-------TTTTTGTGTTTTTTTGGC-TTTTAAGA  941

seq1  ATTTAATTTTATACGTAT-GAGTGTTT  974
      |||||| ||||||||||| ||||||||
seq2  ATTTAA-TTTATACGTATGGAGTGTTT  967